Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq791531 163 3e-35 >seq791531 Length=8839 Score = 163 bits (180), Expect = 3e-35 Identities = 150/190 (79%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 23779 ATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGA 23838 || ||||||||||| || | ||||||||| |||||||| | ||| || |||||||| || Sbjct 7000 ATGTATGTATCAATGAGAAGACTATACATCTCAGAATGCACATTCTCCATAGCAATTTGG 6941 Query 23839 AACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAA 23898 || ||||| |||||||| ||||||| | |||||| || | | || |||| | | | Sbjct 6940 AAGCCATAGAAACATCTTGCTTCAGTTACTTGAACTTCTTGACTGAACCTTTCAACCAGG 6881 Query 23899 TTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGT 23958 |||||||||||||| |||||||||||||| |||||||| ||||||| || ||||| Sbjct 6880 TTTTCGTTAACAATGCCATCACTAGCAGCGAAGAAAGCTAGAACATGGGAAATGAAATGC 6821 Query 23959 CTTTCATCAG 23968 ||||| |||| Sbjct 6820 CTTTCTTCAG 6811 Score = 89.7 bits (98), Expect = 5e-13 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| || ||| | |||||| |||||| | ||||||||||| |||| || ||| Sbjct 7337 TCATCTCTTGAAATAAGTTCATTGCTAAATGTAAGACCTGGCATTAAACCTCTCTTCTTA 7278 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | ||| || || || ||||| || || ||||| || || || ||||| ||||| || Sbjct 7277 AGCCAGAAAATAGCTGCAAAACTGCCAGAGAAGAATATGCCTTCCACAGCAGCAAATGCA 7218 Query 23653 ACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCC 23712 | | ||| ||||||| ||| | ||||| |||||| | || ||| | |||| Sbjct 7217 ATTACACGCTCTGCAAATGTGGCAGATTCATCAGCAATCCACCTGAGTGCCCAGTCAGCC 7158 Query 23713 TTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAA 23756 || |||||||| | |||||||| || || ||||| || Sbjct 7157 TTTTTCTTTACACATGGCAAAGTTTCAATAGCATTGAAGAGGAA 7114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512378308648800