Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_001416.1
Length=48502
Score E
Sequences producing significant alignments: (Bits) Value
seq140194 208 2e-49
>seq140194
Length=4052
Score = 208 bits (230), Expect = 2e-49
Identities = 326/470 (69%), Gaps = 31/470 (7%)
Strand=Plus/Plus
Query 32271 TTCGACAATGCGCTCGGCTTCATCCTTGTCATAGATACCAGCAAATCCGAAGGCCAGACG 32330
||| || |||||||| || || |||| |||||||||||| | | |||||||||| ||
Sbjct 2332 TTCTACGATGCGCTCTGCCTCGTCCTGGTCATAGATACCGCCGTACCCGAAGGCCAAGCG 2391
Query 32331 GGCACACTGAATCATGGCTTTATGACGTAACATCCGTTTGGGATGCGACTGCCACGGCCC 32390
|||||||| ||||||||||| || || | ||| || || ||||| ||||| || ||
Sbjct 2392 TGCACACTGGATCATGGCTTTGTGGCGCAGCATGCGGCGCGGGTGCGATTGCCAGGGGCC 2451
Query 32391 CGTGATTTCTCTGCCTTCGCGAGTTTTGAATGGTTCGCGGCGGCATTCATCCATCCATTC 32450
| || || | ||| | ||| || ||||||| ||
Sbjct 2452 CATG---------CCATTGCGCTT------------------GCACTCGGCCATCCACTC 2484
Query 32451 GGTAACGCAGATCGGATGATTACGGTCCTTGCGGTAAATCCGGCATGTACAGGATTCATT 32510
|| || ||| || | || ||||| |||||||| || ||| || ||| ||| |
Sbjct 2485 CGTCACTTTGATAGGCCGGTTGCGGTCTTTGCGGTAGATGATGCAGGTGCAGCTTTCGTC 2544
Query 32511 GTCCTGCTCAAAGTCCATGCCATCAAACTGCTGGTTTTCATTGATGATGCGGGACCAGCC 32570
|| ||||||||| || || || || |||||| ||| | ||||||||| || ||||||
Sbjct 2545 GTTCTGCTCAAACTCGATACCGTCGAACTGCGGGTGTGAATTGATGATCCGACTCCAGCC 2604
Query 32571 ATCAACGCCCACCACCGGAACGATGCCATTCTGCTTATCAGGAAAGGCGTAAATTTCTTT 32630
|| |||||||| || || |||||||| || | ||| || || |||||||| ||||| ||
Sbjct 2605 GTCCACGCCCACAACGGGCACGATGCCGTTGTTCTTGTCGGGGAAGGCGTAGATTTCCTT 2664
Query 32631 CGTCCACGGATTAAGGCCGTACTGGTTGGCAACGATCAGTAATGCGATGAACTGCGCATC 32690
||||| || || || ||||||||||||| || | ||| | ||| | | |||||| ||
Sbjct 2665 GGTCCAGGGGTTCAGCGCGTACTGGTTGGCGACCACCAGCAGGGCGGTCATCTGCGCGTC 2724
Query 32691 GCTGGCATCACCTTTAAATGCCGTCTGGC--GAAGAGTGGTGATCAGTTC 32738
||| | | ||||| || |||| |||| ||| ||| |||||| ||
Sbjct 2725 GCTCACCTGGCCTTTGAAGGCCG--TGGCCTTAAGCGTGCCGATCAGGTC 2772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 154820221938720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |