Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq454 194 1e-44 seq19790 174 1e-38 seq11854 107 1e-18 seq24361 96.9 2e-15 >seq454 Length=212681 Score = 194 bits (214), Expect = 1e-44 Identities = 324/460 (70%), Gaps = 9/460 (2%) Strand=Plus/Minus Query 97007 TTGGGAAAGGC-CTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACA 97065 || ||||| || || || ||| || | |||||| | | | ||||||||| || | | Sbjct 93069 TTTGGAAATGCTCTAGGCTTTCTAGTTATCTGCTCCTTCAATGTATCAATGTGGTTTAAA 93010 Query 97066 TAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGG 97125 || ||||||||||| ||||| ||||| | ||| |||||||| | ||||||||||| Sbjct 93009 TATATGTGAGCATCCCCTAATGTGTGGACAAAATCTCCAGGTTTGAGGTCAGTGACATGT 92950 Query 97126 GCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATA 97185 |||||||| || || || | |||||||||||||||||| || || |||| |||||| Sbjct 92949 GCGATCATGTGTGTCAAAAGGGCATAGCTAGCAATGTTAAATGGTACACCTAAACCCATA 92890 Query 97186 TCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACT-GACT 97244 || | || ||||| || || ||||| || || | |||| || ||||||||||| | || Sbjct 92889 TCGCCAGACCTTTGGTACAATTGACATGATAGTTCGCCATTACTCACATAAAACTGGGCT 92830 Query 97245 CAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACAT 97304 || | ||||| ||||| | ||||||| || | ||| | | ||||||| ||||| Sbjct 92829 AAACA-GTGACAAGGGGGGAGAACCATTTTGGGTATATCAAGTGCGTTCCAAGAACACAA 92771 Query 97305 CAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAAT--TATCTGCTTTAATTGA 97362 | ||||||| ||| | || ||| | |||| ||||| || ||| || ||| Sbjct 92770 AATTATTCTTCGATCATTAGGATTTTCCTTGATGGCCTTAATCACATTTGC--CAACTGA 92713 Query 97363 TCAACGCCTTCTCCACCATAATTGTGC-TTAAGACCTTGATATTCTGCTCCAAAATGCCT 97421 ||||| |||| || | | | ||| || | | ||| | || |||||||| | Sbjct 92712 TCAACTCCTTGACCTGTGT-AGTCTGCTTTCATATGAGAATACTGAGCCCCAAAATGTCG 92654 Query 97422 CCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 ||| || || ||||| || || || || || ||||||||| Sbjct 92653 CCACTGAAACCCATACACTGGACCTAGATCACCTTCTTCT 92614 >seq19790 Length=54031 Score = 174 bits (192), Expect = 1e-38 Identities = 248/342 (73%), Gaps = 8/342 (2%) Strand=Plus/Minus Query 97035 CTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAAT 97094 |||||| | | |||||||| || |||| ||| |||||||||||||||| || || | Sbjct 16814 CTGCTCCTTCAATGCATCAATATGGTTCAGATATATGTGAGCATCTCCTATTGTATGGAC 16755 Query 97095 AAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCT 97154 ||| |||||||| | | ||||||||| |||||||| || || || | |||||| Sbjct 16754 AAAATCTCCAGGTTTGAGGTTAGTGACATGTGCGATCATGTGTGTCAAAAGGGCATAGCT 16695 Query 97155 AGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGA 97214 |||||||||||| ||||| ||| ||||||||||| | ||| | || | ||||| || Sbjct 16694 AGCAATGTTAAATGGCACACCTCAACCCATATCAGCATACCTTAGGTACATTTGACATGA 16635 Query 97215 AAGCTTTCCATCACACACATAAAACT-GACTCAATACATGACAGGGGGGCAACGCCATTT 97273 || | || | || ||||||||||| | || || | | || || || | ||||||| Sbjct 16634 TAGTTCGCCGTTACTCACATAAAACTGGGCTAAACA-GTTACTAGGTGGAAGAGCCATTT 16576 Query 97274 TTGGAACATCTAAGA-CATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTG 97332 |||| | ||| |||| ||||||||| |||| | |||||||| ||| | || ||| Sbjct 16575 TTGGTATATC-AAGAGCATTCCAAGAGCACAAAATCATTCTTCGATCACTAGGATTTTCC 16517 Query 97333 TGTATGGTATTAAT--TATCTGCTTTAATTGATCAACGCCTT 97372 | ||||| ||||| || ||| || |||||||| |||| Sbjct 16516 TTGATGGTCTTAATCACATTTGC--CAACTGATCAACACCTT 16477 >seq11854 Length=91893 Score = 107 bits (118), Expect = 1e-18 Identities = 125/169 (74%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 97007 TTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACAT 97066 ||||||| | || || ||| || | |||||| | | |||||||| || || | || Sbjct 47227 TTGGGAATGCTCTAGGCTTTCTAGTTATCTGCTCCTTCAATGCATCAATATGGTTTAAAT 47168 Query 97067 AAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGG 97126 | ||||||||||| |||| || || | ||| |||||||| | ||||||||||| | Sbjct 47167 ATATGTGAGCATCCCCTATTGTATGGACAAAATCTCCAGGTTTGAGGTCAGTGACATGTG 47108 Query 97127 CGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCC 97175 ||||||| || || || | |||||||||||||||||| ||||| || Sbjct 47107 CGATCATGTGTGTCAAAAGGGCATAGCTAGCAATGTTAAATGGCACACC 47059 >seq24361 Length=41355 Score = 96.9 bits (106), Expect = 2e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 97032 AAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTG 97091 || |||||| | | ||||||| ||| |||| ||| ||||||||||| |||| || || Sbjct 13611 AACCTGCTCCTTCAATGCATCAACGTGGTTCAGATATATGTGAGCATCGCCTATTGTATG 13552 Query 97092 AATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATA 97151 | ||| ||||| || | ||||||||||| || ||||| || | || | ||| Sbjct 13551 GACAAAATCTCCCGGTTTGAGGTCAGTGACATGTGCAATCATGTGTGTCAGAAGGGCATA 13492 Query 97152 GCTAGCAATGTTAAAAGGCACCCCTA 97177 ||||||||||||||| ||||| |||| Sbjct 13491 GCTAGCAATGTTAAATGGCACACCTA 13466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346176809934050