Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq454 194 1e-44
seq19790 174 1e-38
seq11854 107 1e-18
seq24361 96.9 2e-15
>seq454
Length=212681
Score = 194 bits (214), Expect = 1e-44
Identities = 324/460 (70%), Gaps = 9/460 (2%)
Strand=Plus/Minus
Query 97007 TTGGGAAAGGC-CTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACA 97065
|| ||||| || || || ||| || | |||||| | | | ||||||||| || | |
Sbjct 93069 TTTGGAAATGCTCTAGGCTTTCTAGTTATCTGCTCCTTCAATGTATCAATGTGGTTTAAA 93010
Query 97066 TAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGG 97125
|| ||||||||||| ||||| ||||| | ||| |||||||| | |||||||||||
Sbjct 93009 TATATGTGAGCATCCCCTAATGTGTGGACAAAATCTCCAGGTTTGAGGTCAGTGACATGT 92950
Query 97126 GCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATA 97185
|||||||| || || || | |||||||||||||||||| || || |||| ||||||
Sbjct 92949 GCGATCATGTGTGTCAAAAGGGCATAGCTAGCAATGTTAAATGGTACACCTAAACCCATA 92890
Query 97186 TCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACT-GACT 97244
|| | || ||||| || || ||||| || || | |||| || ||||||||||| | ||
Sbjct 92889 TCGCCAGACCTTTGGTACAATTGACATGATAGTTCGCCATTACTCACATAAAACTGGGCT 92830
Query 97245 CAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACAT 97304
|| | ||||| ||||| | ||||||| || | ||| | | ||||||| |||||
Sbjct 92829 AAACA-GTGACAAGGGGGGAGAACCATTTTGGGTATATCAAGTGCGTTCCAAGAACACAA 92771
Query 97305 CAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAAT--TATCTGCTTTAATTGA 97362
| ||||||| ||| | || ||| | |||| ||||| || ||| || |||
Sbjct 92770 AATTATTCTTCGATCATTAGGATTTTCCTTGATGGCCTTAATCACATTTGC--CAACTGA 92713
Query 97363 TCAACGCCTTCTCCACCATAATTGTGC-TTAAGACCTTGATATTCTGCTCCAAAATGCCT 97421
||||| |||| || | | | ||| || | | ||| | || |||||||| |
Sbjct 92712 TCAACTCCTTGACCTGTGT-AGTCTGCTTTCATATGAGAATACTGAGCCCCAAAATGTCG 92654
Query 97422 CCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461
||| || || ||||| || || || || || |||||||||
Sbjct 92653 CCACTGAAACCCATACACTGGACCTAGATCACCTTCTTCT 92614
>seq19790
Length=54031
Score = 174 bits (192), Expect = 1e-38
Identities = 248/342 (73%), Gaps = 8/342 (2%)
Strand=Plus/Minus
Query 97035 CTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAAT 97094
|||||| | | |||||||| || |||| ||| |||||||||||||||| || || |
Sbjct 16814 CTGCTCCTTCAATGCATCAATATGGTTCAGATATATGTGAGCATCTCCTATTGTATGGAC 16755
Query 97095 AAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCT 97154
||| |||||||| | | ||||||||| |||||||| || || || | ||||||
Sbjct 16754 AAAATCTCCAGGTTTGAGGTTAGTGACATGTGCGATCATGTGTGTCAAAAGGGCATAGCT 16695
Query 97155 AGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGA 97214
|||||||||||| ||||| ||| ||||||||||| | ||| | || | ||||| ||
Sbjct 16694 AGCAATGTTAAATGGCACACCTCAACCCATATCAGCATACCTTAGGTACATTTGACATGA 16635
Query 97215 AAGCTTTCCATCACACACATAAAACT-GACTCAATACATGACAGGGGGGCAACGCCATTT 97273
|| | || | || ||||||||||| | || || | | || || || | |||||||
Sbjct 16634 TAGTTCGCCGTTACTCACATAAAACTGGGCTAAACA-GTTACTAGGTGGAAGAGCCATTT 16576
Query 97274 TTGGAACATCTAAGA-CATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTG 97332
|||| | ||| |||| ||||||||| |||| | |||||||| ||| | || |||
Sbjct 16575 TTGGTATATC-AAGAGCATTCCAAGAGCACAAAATCATTCTTCGATCACTAGGATTTTCC 16517
Query 97333 TGTATGGTATTAAT--TATCTGCTTTAATTGATCAACGCCTT 97372
| ||||| ||||| || ||| || |||||||| ||||
Sbjct 16516 TTGATGGTCTTAATCACATTTGC--CAACTGATCAACACCTT 16477
>seq11854
Length=91893
Score = 107 bits (118), Expect = 1e-18
Identities = 125/169 (74%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 97007 TTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACAT 97066
||||||| | || || ||| || | |||||| | | |||||||| || || | ||
Sbjct 47227 TTGGGAATGCTCTAGGCTTTCTAGTTATCTGCTCCTTCAATGCATCAATATGGTTTAAAT 47168
Query 97067 AAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGG 97126
| ||||||||||| |||| || || | ||| |||||||| | ||||||||||| |
Sbjct 47167 ATATGTGAGCATCCCCTATTGTATGGACAAAATCTCCAGGTTTGAGGTCAGTGACATGTG 47108
Query 97127 CGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCC 97175
||||||| || || || | |||||||||||||||||| ||||| ||
Sbjct 47107 CGATCATGTGTGTCAAAAGGGCATAGCTAGCAATGTTAAATGGCACACC 47059
>seq24361
Length=41355
Score = 96.9 bits (106), Expect = 2e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 97032 AAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTG 97091
|| |||||| | | ||||||| ||| |||| ||| ||||||||||| |||| || ||
Sbjct 13611 AACCTGCTCCTTCAATGCATCAACGTGGTTCAGATATATGTGAGCATCGCCTATTGTATG 13552
Query 97092 AATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATA 97151
| ||| ||||| || | ||||||||||| || ||||| || | || | |||
Sbjct 13551 GACAAAATCTCCCGGTTTGAGGTCAGTGACATGTGCAATCATGTGTGTCAGAAGGGCATA 13492
Query 97152 GCTAGCAATGTTAAAAGGCACCCCTA 97177
||||||||||||||| ||||| ||||
Sbjct 13491 GCTAGCAATGTTAAATGGCACACCTA 13466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346176809934050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |