Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq56889 116 3e-21 seq5901 114 1e-20 >seq56889 Length=12386 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| | | || ||| |||| || | ||||| ||||| || ||||||||||| Sbjct 6516 CCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAA 6575 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | |||||| ||| || |||||||| |||||| | || | ||||||||| || || || Sbjct 6576 AGAGTGCGGCCATCTTCCAGCTGTTTGCCAGCGAAAATTAAACGCTGCTGGTCTGGTGGG 6635 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || || || |||||| |||||| || || | ||| | |||||| || ||| || Sbjct 6636 ATACCTTCTTTGTCTTGGATTTTTGCCTTCACGTTTTCAATGGTGTCACTGGGCTCTACT 6695 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | || ||||| || || || |||||||| |||||||| Sbjct 6696 TCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTTACAAAGATCTGCAT 6742 Score = 105 bits (116), Expect = 6e-18 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 118524 CTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA 118583 |||||||| | ||| | ||||| |||||||||||||| || || | ||| || | Sbjct 6300 CTCAACACAAGGTGCAAGGTAGATTCTTTTTGAATGTTATAGTCTGAAAGAGTACGACCA 6359 Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 || || | ||| || ||||| | || ||||| ||||| ||||| || ||||| |||||| Sbjct 6360 TCTTCTAACTGCTTACCAGCAAAAATAAGACGTTGCTGGTCGGGTGGAATGCCTTCCTTG 6419 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCGACCTCGACGGTCAC 118702 ||| || ||| || || | ||||| ||||| | || | || || || | || | Sbjct 6420 TCTTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTTGGT-TCAACTTCAAGAGTGAT 6478 Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 ||||| || |||| || || || |||||||||||| || Sbjct 6479 TGTTTTCCCAGTCAATGTCTTGACGAAAATCTGCATGCCT 6518 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| | | || ||| |||| || | ||||| ||||| || ||||||||||| Sbjct 6060 CCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAA 6119 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||| ||| || |||||||| ||||| | || | ||||||||| || || || Sbjct 6120 AGCGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGG 6179 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || || || |||||| |||||| || || | ||| | |||||| || || || Sbjct 6180 ATACCTTCTTTGTCTTGGATTTTTGCCTTTACGTTTTCAATGGTGTCACTGGGTTCCACT 6239 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 || | || | || ||||| || || || || ||||| ||||||||| || Sbjct 6240 TCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGCCT 6290 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 118524 CTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA 118583 |||||||| | || | ||||| |||||||||||||| || || | || || | Sbjct 5844 CTCAACACAAGATGCAGGGTAGATTCTTTTTGAATGTTATAGTCCGAAAGGGTACGACCA 5903 Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 || || | ||| |||||||| | || ||||||||||| || || || || || || ||| Sbjct 5904 TCTTCTAACTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGGATACCTTCTTTG 5963 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCGACCTCGACGGTCAC 118702 ||| || ||| || || | ||||| ||||| | || | || || || | || | Sbjct 5964 TCTTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTTGGT-TCAACTTCAAGAGTGAT 6022 Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 ||||| || |||| || || ||||||||||||||| || Sbjct 6023 TGTTTTCCCAGTCAATGTCTTAACAAAAATCTGCATGCCT 6062 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| | || | || ||| | || | ||| |||||||| || || ||||| ||| Sbjct 5602 TACCTCCTCTCAACCGCAGCACAAGATGCAATGTGGACTCTTTCTGGATATTGTAGTCGG 5661 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || || ||| || || || || ||||| | || ||||| ||||| || || | Sbjct 5662 ACAGGGTTCGGCCATCTTCAAGTTGCTTACCAGCAAAAATAAGACGTTGCTGGTCTGGGG 5721 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | |||||||| ||||| ||||||| || || | ||| | || || || || | Sbjct 5722 GAATGCCCTCTTTGTCCTGAATTTTTGCCTTGACATTTTCAATTGTATCACTGGGTTCCA 5781 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 | || | || | || || || || | ||| || ||||||||||||||| Sbjct 5782 CTTCAAGTGTTATGGTCTTCCCTGTTAAAGTCTTGACAAAAATCTGCATG 5831 >seq5901 Length=104132 Score = 114 bits (126), Expect = 1e-20 Identities = 296/446 (66%), Gaps = 4/446 (1%) Strand=Plus/Minus Query 44854 CGAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTTGCGGC 44913 |||||| || |||| |||||||| || ||||| |||||||| ||||| || || || Sbjct 20944 CGAACGTCTGCTCGCTTTCGCCATAGTGGAAGGCGTGTTCTTCTCGGGATCGTTCGCAGC 20885 Query 44914 GATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTGAT 44973 || || | | || | | || || ||||||| ||||||| |||||||| || || Sbjct 20884 CATCTTCTGGCTCAAGAAGAGAGGGCTGCTGCCCGGTTTGACGTTCAGCAACGAGTTCAT 20825 Query 44974 TTCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGCCTCTACTATAATACGAGAGTCGA 45033 |||||||||| || ||| ||| || || ||| | | | | || | || Sbjct 20824 CAGTCGAGACGAAGGCCTCCACTGCAATTTCGCTTGCTTGCTGTTCACT-CGCTACCTGA 20766 Query 45034 -TCAAAAGTTGGACGCGCCCACCGTCAACGACATGTTCTCCGAAGCCGTGGCCATCGAGA 45092 ||| ||| || || | |||| | || || ||||||||||| |||| Sbjct 20765 CTCACAAGCCCGATCCGGCACGCGTCTGTCAGATTTTTACCGAAGCCGTGCAACTCGAAC 20706 Query 45093 TGGAATTTTTTGCTGAGGCTCTGCCCGAATCGTTGGTGGGAATGAAC-GCGAATATGATG 45151 |||||| | || |||||||||| || || | || ||||| ||| | ||||| Sbjct 20705 AAGAATTTCTCCTGGAAGCTCTGCCCGTCTCCCTGATTGGCATGAATAGCGCTT-TGATG 20647 Query 45152 AGAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGTCCAGTTAAAGTATCCCAAGATG 45211 | |||||||||| || |||||||| | | | || | || | || || || ||| Sbjct 20646 AAGCAGTACATTGAATTCGTCGCCGACCATTTGCTGTTGCAACTCGGATACCCGAAAATG 20587 Query 45212 TACTATACTGAGAACCCATTCGAGTTTATGAACAATATTTCGTTGGAGGGCAAAACTAAt 45271 | | | || ||||| |||||||||||| | ||| | || ||||||| ||| Sbjct 20586 TTTCACTCGGAAAACCCTTTCGAGTTTATGGAGCTGATTAGTCTCGAAAGCAAAACCAAT 20527 Query 45272 ttttttGAGAAACGCGTCGGCGAATA 45297 || |||||||||||||| ||||||| Sbjct 20526 TTCTTTGAGAAACGCGTGAGCGAATA 20501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433070798896180