Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq56889 116 3e-21
seq5901 114 1e-20
>seq56889
Length=12386
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| | | || ||| |||| || | ||||| ||||| || |||||||||||
Sbjct 6516 CCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAA 6575
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| |||||| ||| || |||||||| |||||| | || | ||||||||| || || ||
Sbjct 6576 AGAGTGCGGCCATCTTCCAGCTGTTTGCCAGCGAAAATTAAACGCTGCTGGTCTGGTGGG 6635
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| || || |||||| |||||| || || | ||| | |||||| || ||| ||
Sbjct 6636 ATACCTTCTTTGTCTTGGATTTTTGCCTTCACGTTTTCAATGGTGTCACTGGGCTCTACT 6695
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | || | || ||||| || || || |||||||| ||||||||
Sbjct 6696 TCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTTACAAAGATCTGCAT 6742
Score = 105 bits (116), Expect = 6e-18
Identities = 157/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 118524 CTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA 118583
|||||||| | ||| | ||||| |||||||||||||| || || | ||| || |
Sbjct 6300 CTCAACACAAGGTGCAAGGTAGATTCTTTTTGAATGTTATAGTCTGAAAGAGTACGACCA 6359
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
|| || | ||| || ||||| | || ||||| ||||| ||||| || ||||| ||||||
Sbjct 6360 TCTTCTAACTGCTTACCAGCAAAAATAAGACGTTGCTGGTCGGGTGGAATGCCTTCCTTG 6419
Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCGACCTCGACGGTCAC 118702
||| || ||| || || | ||||| ||||| | || | || || || | || |
Sbjct 6420 TCTTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTTGGT-TCAACTTCAAGAGTGAT 6478
Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
||||| || |||| || || || |||||||||||| ||
Sbjct 6479 TGTTTTCCCAGTCAATGTCTTGACGAAAATCTGCATGCCT 6518
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| | | || ||| |||| || | ||||| ||||| || |||||||||||
Sbjct 6060 CCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAA 6119
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||||| ||| || |||||||| ||||| | || | ||||||||| || || ||
Sbjct 6120 AGCGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGG 6179
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| || || |||||| |||||| || || | ||| | |||||| || || ||
Sbjct 6180 ATACCTTCTTTGTCTTGGATTTTTGCCTTTACGTTTTCAATGGTGTCACTGGGTTCCACT 6239
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|| | || | || ||||| || || || || ||||| ||||||||| ||
Sbjct 6240 TCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGCCT 6290
Score = 96.9 bits (106), Expect = 3e-15
Identities = 155/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 118524 CTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA 118583
|||||||| | || | ||||| |||||||||||||| || || | || || |
Sbjct 5844 CTCAACACAAGATGCAGGGTAGATTCTTTTTGAATGTTATAGTCCGAAAGGGTACGACCA 5903
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
|| || | ||| |||||||| | || ||||||||||| || || || || || || |||
Sbjct 5904 TCTTCTAACTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGGATACCTTCTTTG 5963
Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCGACCTCGACGGTCAC 118702
||| || ||| || || | ||||| ||||| | || | || || || | || |
Sbjct 5964 TCTTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTTGGT-TCAACTTCAAGAGTGAT 6022
Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
||||| || |||| || || ||||||||||||||| ||
Sbjct 6023 TGTTTTCCCAGTCAATGTCTTAACAAAAATCTGCATGCCT 6062
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
||||||| | || | || ||| | || | ||| |||||||| || || ||||| |||
Sbjct 5602 TACCTCCTCTCAACCGCAGCACAAGATGCAATGTGGACTCTTTCTGGATATTGTAGTCGG 5661
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || || ||| || || || || ||||| | || ||||| ||||| || || |
Sbjct 5662 ACAGGGTTCGGCCATCTTCAAGTTGCTTACCAGCAAAAATAAGACGTTGCTGGTCTGGGG 5721
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| |||||||| ||||| ||||||| || || | ||| | || || || || |
Sbjct 5722 GAATGCCCTCTTTGTCCTGAATTTTTGCCTTGACATTTTCAATTGTATCACTGGGTTCCA 5781
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
| || | || | || || || || | ||| || |||||||||||||||
Sbjct 5782 CTTCAAGTGTTATGGTCTTCCCTGTTAAAGTCTTGACAAAAATCTGCATG 5831
>seq5901
Length=104132
Score = 114 bits (126), Expect = 1e-20
Identities = 296/446 (66%), Gaps = 4/446 (1%)
Strand=Plus/Minus
Query 44854 CGAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTTGCGGC 44913
|||||| || |||| |||||||| || ||||| |||||||| ||||| || || ||
Sbjct 20944 CGAACGTCTGCTCGCTTTCGCCATAGTGGAAGGCGTGTTCTTCTCGGGATCGTTCGCAGC 20885
Query 44914 GATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTGAT 44973
|| || | | || | | || || ||||||| ||||||| |||||||| || ||
Sbjct 20884 CATCTTCTGGCTCAAGAAGAGAGGGCTGCTGCCCGGTTTGACGTTCAGCAACGAGTTCAT 20825
Query 44974 TTCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGCCTCTACTATAATACGAGAGTCGA 45033
|||||||||| || ||| ||| || || ||| | | | | || | ||
Sbjct 20824 CAGTCGAGACGAAGGCCTCCACTGCAATTTCGCTTGCTTGCTGTTCACT-CGCTACCTGA 20766
Query 45034 -TCAAAAGTTGGACGCGCCCACCGTCAACGACATGTTCTCCGAAGCCGTGGCCATCGAGA 45092
||| ||| || || | |||| | || || ||||||||||| ||||
Sbjct 20765 CTCACAAGCCCGATCCGGCACGCGTCTGTCAGATTTTTACCGAAGCCGTGCAACTCGAAC 20706
Query 45093 TGGAATTTTTTGCTGAGGCTCTGCCCGAATCGTTGGTGGGAATGAAC-GCGAATATGATG 45151
|||||| | || |||||||||| || || | || ||||| ||| | |||||
Sbjct 20705 AAGAATTTCTCCTGGAAGCTCTGCCCGTCTCCCTGATTGGCATGAATAGCGCTT-TGATG 20647
Query 45152 AGAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGTCCAGTTAAAGTATCCCAAGATG 45211
| |||||||||| || |||||||| | | | || | || | || || || |||
Sbjct 20646 AAGCAGTACATTGAATTCGTCGCCGACCATTTGCTGTTGCAACTCGGATACCCGAAAATG 20587
Query 45212 TACTATACTGAGAACCCATTCGAGTTTATGAACAATATTTCGTTGGAGGGCAAAACTAAt 45271
| | | || ||||| |||||||||||| | ||| | || ||||||| |||
Sbjct 20586 TTTCACTCGGAAAACCCTTTCGAGTTTATGGAGCTGATTAGTCTCGAAAGCAAAACCAAT 20527
Query 45272 ttttttGAGAAACGCGTCGGCGAATA 45297
|| |||||||||||||| |||||||
Sbjct 20526 TTCTTTGAGAAACGCGTGAGCGAATA 20501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433070798896180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |