Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq56889 125 8e-24
seq5783 111 2e-19
seq3779 105 8e-18
seq4561 100 3e-16
seq78 91.5 2e-13
seq23710 89.7 6e-13
seq15631 87.8 2e-12
>seq56889
Length=12386
Score = 125 bits (138), Expect = 8e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|||||||| || |||| ||| | |||||||||| ||| || || |||||||| || | |
Sbjct 5604 CCTCCTCTCAACCGCAGCACAAGATGCAATGTGGACTCTTTCTGGATATTGTAGTCGGAC 5663
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || || | || || || ||||||||||| || || || || |||||||| | ||
Sbjct 5664 AGGGTTCGGCCATCTTCAAGTTGCTTACCAGCAAAAATAAGACGTTGCTGGTCTGGGGGA 5723
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| || ||| |||||| ||| |||||| |||| | | | || || || | ||||||
Sbjct 5724 ATGCCCTCTTTGTCC-TGAATTTTTGCCTTGACATTTTCAATTGTATCACTGGGTTCCAC 5782
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | || ||||| || || |||| ||||| ||||| || |||||
Sbjct 5783 TTCAAGTGTTATGGTCTTCCCTGTTAAAGTCTTGACAAAAATCTGCAT 5830
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|||||||| | | |||||| | ||||| || || |||||||| || || || |
Sbjct 6288 CCTCCTCTAAGCCTCAACACAAGGTGCAAGGTAGATTCTTTTTGAATGTTATAGTCTGAA 6347
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
||||| || | || |||| |||||||||||| || || || || |||||||||| ||
Sbjct 6348 AGAGTACGACCATCTTCTAACTGCTTACCAGCAAAAATAAGACGTTGCTGGTCGGGTGGA 6407
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136
| || |||||||| ||| ||| |||| | | | ||||| || | ||| ||
Sbjct 6408 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTTGGTTCAACT 6467
Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | ||||| ||||| || || | ||||| || || || |||||
Sbjct 6468 TCAAGAGTGATTGTTTTCCCAGTCAATGTCTTGACGAAAATCTGCAT 6514
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
||||| || | ||||| |||| ||| | || || || || || |||||||| |
Sbjct 6516 CCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAA 6575
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
||||| || | || || ||||| || |||||||| || | ||||||||||| | ||
Sbjct 6576 AGAGTGCGGCCATCTTCCAGCTGTTTGCCAGCGAAAATTAAACGCTGCTGGTCTGGTGGG 6635
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136
| | || ||||| ||||||| || | | | | ||||| || | || ||
Sbjct 6636 ATACCTTCTTTGTCTTGGATTTTTGCCTTCACGTTTTCAATGGTGTCACTGGGCTCTACT 6695
Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | |||||||| |||||||| || |||||||||||||| |||||
Sbjct 6696 TCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTTACAAAGATCTGCAT 6742
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
||||| || | ||||| |||| ||| | || || || || || |||||||| |
Sbjct 6060 CCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAA 6119
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || || | || || ||||| || ||||| || || | ||||||||||| | ||
Sbjct 6120 AGCGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGG 6179
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136
| | || ||||| ||||||| || | | | | ||||| || | ||||||
Sbjct 6180 ATACCTTCTTTGTCTTGGATTTTTGCCTTTACGTTTTCAATGGTGTCACTGGGTTCCACT 6239
Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | |||||||| |||||||| || ||||| |||||||| |||||
Sbjct 6240 TCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 6286
Score = 86.0 bits (94), Expect = 7e-12
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| |||||||| | ||| ||||| ||||||||| || || || || ||||| || | |
Sbjct 2967 CCACCTCTTAACCTCAAAACCAAGTGCAATGTGGATTCTTTCTGTATGTTGTAGTCTGAC 3026
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || || | || |||| |||||| || || || || || || |||||||| | ||
Sbjct 3027 AGTGTTCGGCCATCTTCTAACTGCTTGCCTGCAAAAATAAGACGTTGCTGGTCTGGAGGA 3086
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136
| | || ||||| |||||| ||| | || | | ||||| || | ||| ||
Sbjct 3087 ATACCTTCTTTGTCTTGTATTTTTGCTTTCACGTTCTCGATAGTGTCACTGGGTTCAACC 3146
Query 43137 TCGACCGTGATGGTTTTGCC 43156
|| | || |||||||||||
Sbjct 3147 TCCAAGGTTATGGTTTTGCC 3166
>seq5783
Length=136462
Score = 111 bits (122), Expect = 2e-19
Identities = 73/81 (90%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| || |||| |||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 13206 AAAAAATTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 13147
Query 60117 TCACCACTATACTACCGAGGA 60137
| |||||||||||||||||||
Sbjct 13146 TGACCACTATACTACCGAGGA 13126
>seq3779
Length=122314
Score = 105 bits (116), Expect = 8e-18
Identities = 67/73 (92%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 93835 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 93894
Query 60126 TACTACCGAGGAT 60138
|||||||||||||
Sbjct 93895 TACTACCGAGGAT 93907
>seq4561
Length=102561
Score = 100 bits (110), Expect = 3e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct 87483 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCACGTGACAGGCGGGGATACTGACCACTA 87424
Query 60126 TACTACCGAGGAT 60138
|||||||||||||
Sbjct 87423 TACTACCGAGGAT 87411
>seq78
Length=387153
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|||||||| || | || || | |||||||||| ||||||||| |||||| | || | |
Sbjct 279104 CCTCCTCTCAACCACAGCATAAGATGCAATGTGGACTCCTTTTGGATATTGCAGTCTGAC 279045
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || || | || | ||||||||||| | | || || || |||||||| | ||
Sbjct 279044 AGGGTTCGGCCATCTCCGAGCTGCTTACCGGTAATAATAAGGCGTTGCTGGTCTGGTGGA 278985
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCA-CCGTGTCGCTCGATTCCAC 43135
| || ||| ||||| || |||| ||||| ||| || ||||| || | |||||
Sbjct 278984 ATGCCCTCTTTGTCTTGGAATTTTACTTTGA-TGTCTTCAGTTGTGTCACTGGCTTCCAT 278926
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAG 43162
|| | |||||||| || | ||||||
Sbjct 278925 TTCTAGTGTGATGGTCTTCCTCGTTAG 278899
>seq23710
Length=47617
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/71 (89%), Gaps = 2/71 (3%)
Strand=Plus/Minus
Query 60061 ATTTT--CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 60118
||||| |||| |||| ||||||||||||| ||||||||||||||||||||| |||||
Sbjct 3169 ATTTTGGCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTG 3110
Query 60119 ACCACTATACT 60129
|||||||||||
Sbjct 3109 ACCACTATACT 3099
>seq15631
Length=58196
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030
||| |||||||| | |||||| || || ||||||||||||||| || | || || ||
Sbjct 19986 CAAAACCAAATGGAGTGTGCTTTCTTTCTGAATATTGTAATCACTCAAGGAACGATCATC 19927
Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090
|| || ||||| || || ||||| | ||||| || || | || | | ||| || ||
Sbjct 19926 CTCCAGTTGCTTCCCCGCAAATATCAACCGCTGTTGCTCTGGAGGTATCCCCTCTTTATC 19867
Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150
| || || | ||| | ||| | || || | | || | || | |||||| ||
Sbjct 19866 CTGAATCTTCTCTTTCACAGTCATTATGGTTTCTGTAGGCTCAGCGTCAATCGTGATCGT 19807
Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186
|||||| || ||||| || ||||| | |||||| ||
Sbjct 19806 TTTGCCTGTCAGCGTTTTCACAAAAAATTGCATCTT 19771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570790722806200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |