Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq95420 98.7 1e-15
seq56889 98.7 1e-15
seq23149 95.1 2e-14
seq18729 93.3 6e-14
>seq95420
Length=6446
Score = 98.7 bits (108), Expect = 1e-15
Identities = 108/142 (76%), Gaps = 5/142 (4%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATC--TG 146108
|||||||| ||||| || || | ||||||||| |||||| ||||||||||| |
Sbjct 33 CCACCTCTCAGTCTCAAAACAAGATGTAAAGTGTTTTCTTTTTGAATATTATAATCGCTT 92
Query 146109 AAAGAGTTCTGCTATCATC---TAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCG 146165
|| | | | |||||| ||| ||||| ||||||||||| | || ||||||||| |
Sbjct 93 AATTAATATTATAATCATCCTCTAACTGTTTGCCAGCAAAAATAAGTCGTTGCTGATCGG 152
Query 146166 GAGGAATTCCTTCTTTATCTTG 146187
| |||||||||||||| |||||
Sbjct 153 GTGGAATTCCTTCTTTGTCTTG 174
>seq56889
Length=12386
Score = 98.7 bits (108), Expect = 1e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||||||| || || || | || || ||||||||||| || ||||| ||||||
Sbjct 6288 CCTCCTCTAAGCCTCAACACAAGGTGCAAGGTAGATTCTTTTTGAATGTTATAGTCTGAA 6347
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
||||| | | ||| ||||| || || ||||||||||| | | |||||| || || |||
Sbjct 6348 AGAGTACGACCATCTTCTAACTGCTTACCAGCAAAAATAAGACGTTGCTGGTCGGGTGGA 6407
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || |||||
Sbjct 6408 ATGCCTTCCTTGTCTTG 6424
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||||||| || || || | ||| | ||||||||||| || ||||| || |||
Sbjct 5832 CCGCCTCTAAGCCTCAACACAAGATGCAGGGTAGATTCTTTTTGAATGTTATAGTCCGAA 5891
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || | | ||| ||||| || |||||||||||||||| | ||||| || || ||
Sbjct 5892 AGGGTACGACCATCTTCTAACTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGG 5951
Query 146171 ATTCCTTCTTTATCTTG 146187
|| |||||||| |||||
Sbjct 5952 ATACCTTCTTTGTCTTG 5968
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| || || |||| || |||| ||||| ||||||||||| || || |||||||||
Sbjct 6060 CCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAA 6119
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || | || ||| || | ||||| ||||||||||| || | ||||| || || ||
Sbjct 6120 AGCGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGG 6179
Query 146171 ATTCCTTCTTTATCTTG 146187
|| |||||||| |||||
Sbjct 6180 ATACCTTCTTTGTCTTG 6196
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| || || |||| || |||| ||||| ||||||||||| || || |||||||||
Sbjct 6516 CCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAA 6575
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
||||| | || ||| || | ||||| ||||| ||||| || | ||||| || || ||
Sbjct 6576 AGAGTGCGGCCATCTTCCAGCTGTTTGCCAGCGAAAATTAAACGCTGCTGGTCTGGTGGG 6635
Query 146171 ATTCCTTCTTTATCTTG 146187
|| |||||||| |||||
Sbjct 6636 ATACCTTCTTTGTCTTG 6652
>seq23149
Length=43904
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| ||||| || || | ||||||||| |||||| |||||||||||
Sbjct 19843 CCACCTCTCAGTCTCAAAACAAGATGTAAAGTGTTTTCTTTTTGAATATTATAATCGCTT 19902
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| | || ||| || || ||||| ||||||||||| | | ||||||||| || |||
Sbjct 19903 AATATCCTATCATCCTCCAACTGTTTGCCAGCAAAAATAAGCCGTTGCTGATCGGGTGGA 19962
Query 146171 ATTCCTTCTTTATCTTG 146187
||||||||||| |||||
Sbjct 19963 ATTCCTTCTTTGTCTTG 19979
>seq18729
Length=68688
Score = 93.3 bits (102), Expect = 6e-14
Identities = 113/154 (73%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 10457 TCCCAGATCTGATTTAGCTCTAAATAAATTTATTGATATTGGAGCTGGAGTAATTGACGA 10516
||| || |||| || || |||| || ||||||||| |||| ||||||||||||||||
Sbjct 44776 TCCAAGGTCTGGATTGGCAGTAAAGAACTTTATTGATGTTGGCACTGGAGTAATTGACGA 44835
Query 10517 AGATTATAGAGGAAATGTGGGAGTAATATTATTTAATCATTCTAATGAAGATTTTATAAT 10576
|||||||| |||||||| | | | | |||||| | |||| ||| | | |
Sbjct 44836 GGATTATAGGGGAAATGTTCGCATTGAACTTTTTAATTTTGGACCTGAACCTTTCACAGT 44895
Query 10577 AAATAGAGGAGATAGAATATCTCAATTAATATGT 10610
||||| ||| ||||||| | ||||||||||||
Sbjct 44896 AAATAAAGGTGATAGAACTACCCAATTAATATGT 44929
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 742191165996800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |