Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq95420 98.7 1e-15 seq56889 98.7 1e-15 seq23149 95.1 2e-14 seq18729 93.3 6e-14 >seq95420 Length=6446 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/142 (76%), Gaps = 5/142 (4%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATC--TG 146108 |||||||| ||||| || || | ||||||||| |||||| ||||||||||| | Sbjct 33 CCACCTCTCAGTCTCAAAACAAGATGTAAAGTGTTTTCTTTTTGAATATTATAATCGCTT 92 Query 146109 AAAGAGTTCTGCTATCATC---TAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCG 146165 || | | | |||||| ||| ||||| ||||||||||| | || ||||||||| | Sbjct 93 AATTAATATTATAATCATCCTCTAACTGTTTGCCAGCAAAAATAAGTCGTTGCTGATCGG 152 Query 146166 GAGGAATTCCTTCTTTATCTTG 146187 | |||||||||||||| ||||| Sbjct 153 GTGGAATTCCTTCTTTGTCTTG 174 >seq56889 Length=12386 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || |||||||| || || || | || || ||||||||||| || ||||| |||||| Sbjct 6288 CCTCCTCTAAGCCTCAACACAAGGTGCAAGGTAGATTCTTTTTGAATGTTATAGTCTGAA 6347 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | | ||| ||||| || || ||||||||||| | | |||||| || || ||| Sbjct 6348 AGAGTACGACCATCTTCTAACTGCTTACCAGCAAAAATAAGACGTTGCTGGTCGGGTGGA 6407 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || ||||| Sbjct 6408 ATGCCTTCCTTGTCTTG 6424 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || |||||||| || || || | ||| | ||||||||||| || ||||| || ||| Sbjct 5832 CCGCCTCTAAGCCTCAACACAAGATGCAGGGTAGATTCTTTTTGAATGTTATAGTCCGAA 5891 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | ||| ||||| || |||||||||||||||| | ||||| || || || Sbjct 5892 AGGGTACGACCATCTTCTAACTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGG 5951 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||| ||||| Sbjct 5952 ATACCTTCTTTGTCTTG 5968 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || || || |||| || |||| ||||| ||||||||||| || || ||||||||| Sbjct 6060 CCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAA 6119 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | || ||| || | ||||| ||||||||||| || | ||||| || || || Sbjct 6120 AGCGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGG 6179 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||| ||||| Sbjct 6180 ATACCTTCTTTGTCTTG 6196 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || || || |||| || |||| ||||| ||||||||||| || || ||||||||| Sbjct 6516 CCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAA 6575 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | || ||| || | ||||| ||||| ||||| || | ||||| || || || Sbjct 6576 AGAGTGCGGCCATCTTCCAGCTGTTTGCCAGCGAAAATTAAACGCTGCTGGTCTGGTGGG 6635 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||| ||||| Sbjct 6636 ATACCTTCTTTGTCTTG 6652 >seq23149 Length=43904 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| ||||| || || | ||||||||| |||||| ||||||||||| Sbjct 19843 CCACCTCTCAGTCTCAAAACAAGATGTAAAGTGTTTTCTTTTTGAATATTATAATCGCTT 19902 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | | || ||| || || ||||| ||||||||||| | | ||||||||| || ||| Sbjct 19903 AATATCCTATCATCCTCCAACTGTTTGCCAGCAAAAATAAGCCGTTGCTGATCGGGTGGA 19962 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||||||||| ||||| Sbjct 19963 ATTCCTTCTTTGTCTTG 19979 >seq18729 Length=68688 Score = 93.3 bits (102), Expect = 6e-14 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 10457 TCCCAGATCTGATTTAGCTCTAAATAAATTTATTGATATTGGAGCTGGAGTAATTGACGA 10516 ||| || |||| || || |||| || ||||||||| |||| |||||||||||||||| Sbjct 44776 TCCAAGGTCTGGATTGGCAGTAAAGAACTTTATTGATGTTGGCACTGGAGTAATTGACGA 44835 Query 10517 AGATTATAGAGGAAATGTGGGAGTAATATTATTTAATCATTCTAATGAAGATTTTATAAT 10576 |||||||| |||||||| | | | | |||||| | |||| ||| | | | Sbjct 44836 GGATTATAGGGGAAATGTTCGCATTGAACTTTTTAATTTTGGACCTGAACCTTTCACAGT 44895 Query 10577 AAATAGAGGAGATAGAATATCTCAATTAATATGT 10610 ||||| ||| ||||||| | |||||||||||| Sbjct 44896 AAATAAAGGTGATAGAACTACCCAATTAATATGT 44929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 742191165996800