Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq56889 102 5e-17 >seq56889 Length=12386 Score = 102 bits (112), Expect = 5e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34181 ACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCC 34240 ||||| |||| ||| ||||||||| |||||||| || || ||| ||| | || ||| Sbjct 6078 ACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAAAGCGTGCGGCCATCTTCC 6137 Query 34241 AACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCT 34300 | ||| ||||| || ||||| | ||||||||||| || | | || ||||| Sbjct 6138 AGCTGTTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGGATACCTTCTTTGTCTTGG 6197 Query 34301 ATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTG 34360 || ||| ||||| | | || | || | | ||| || || | |||||||| ||| Sbjct 6198 ATTTTTGCCTTTACGTTTTCAATGGTGTCACTGGGTTCCACTTCAAGTGTGATGGTCTTG 6257 Query 34361 CCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || ||||| || ||||||||||||||||| Sbjct 6258 CCCGTGAGGGTCTTCACAAAGATCTGCAT 6286 Score = 93.3 bits (102), Expect = 3e-14 Identities = 136/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 34174 CCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTC 34233 ||||| |||| ||| || || ||||||||||||||||||||| ||||| ||| | Sbjct 2978 CCTCAAAACCAAGTGCAATGTGGATTCTTTCTGTATGTTGTAGTCTGACAGTGTTCGGCC 3037 Query 34234 GTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTT 34293 || || |||||||||||||| ||||| || || |||||||| || | | || || Sbjct 3038 ATCTTCTAACTGCTTGCCTGCAAAAATAAGACGTTGCTGGTCTGGAGGAATACCTTCTTT 3097 Query 34294 GTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGA 34352 ||| ||| ||||||||| | | | || | || | | ||| || |||| || | Sbjct 3098 GTCTTGTAT-TTTTGCTTTCACGTTCTCGATAGTGTCACTGGGTTCAACCTCCAAGGTTA 3156 Query 34353 TGGTTTTGCC 34362 |||||||||| Sbjct 3157 TGGTTTTGCC 3166 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | || || |||||| || || || || |||||||| || |||||||||||| Sbjct 5604 CCTCCTCTCAACCGCAGCACAAGATGCAATGTGGACTCTTTCTGGATATTGTAGTCGGAC 5663 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||||| || || ||||| || || |||||||| ||| Sbjct 5664 AGGGTTCGGCCATCTTCAAGTTGCTTACCAGCAAAAATAAGACGTTGCTGGTCTGGGGGA 5723 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||| ||||| || ||| ||| | || | || | ||| | | ||| || Sbjct 5724 ATGCCCTCTTTGTCCTGAATTTTTGCCTTGACATTTTCAATTGTATCACTGGGTTCCACT 5783 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | || ||||| || || || | ||| || ||||| |||||||| Sbjct 5784 TCAAGTGTTATGGTCTTCCCTGTTAAAGTCTTGACAAAAATCTGCAT 5830 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| | ||||||| ||| || || | ||| |||||| || ||||| ||||| || Sbjct 5832 CCGCCTCTAAGCCTCAACACAAGATGCAGGGTAGATTCTTTTTGAATGTTATAGTCCGAA 5891 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || |||||||| || || ||||| || ||||||||||| || Sbjct 5892 AGGGTACGACCATCTTCTAACTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGG 5951 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | || ||||| |||||| ||| | || | || | || | | ||| || Sbjct 5952 ATACCTTCTTTGTCTTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTTGGTTCAACT 6011 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| ||||| || || | || || ||||| |||||||| Sbjct 6012 TCAAGAGTGATTGTTTTCCCAGTCAATGTCTTAACAAAAATCTGCAT 6058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322506327682400