Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq15631 118 8e-22 seq17656 109 4e-19 seq1004 109 4e-19 seq3631 105 5e-18 seq454 96.9 3e-15 seq15459 95.1 1e-14 seq22141 89.7 4e-13 seq56889 86.0 5e-12 seq13072 86.0 5e-12 seq11758 82.4 6e-11 >seq15631 Length=58196 Score = 118 bits (130), Expect = 8e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||| | ||| || ||||| || || ||||| || |||||||| ||||| || || Sbjct 20000 CCACCTCGAAGTCTCAAAACCAAATGGAGTGTGCTTTCTTTCTGAATATTGTAATCACTC 19941 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 | ||||| || |||||||| || || || ||||||||||||||||| || ||||| Sbjct 19940 AAGGAACGATCATCCTCCAGTTGCTTCCCCGCAAATATCAACCGCTGTTGCTCTGGAGGT 19881 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||| || ||| ||| || | || || | | | | | || | ||| | Sbjct 19880 ATCCCCTCTTTATCCTGAATCTTCTCTTTCACAGTCATTATGGTTTCTGTAGGCTCAGCG 19821 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 || | || ||||| ||||| ||||| || |||||||| | |||||| || Sbjct 19820 TCAATCGTGATCGTTTTGCCTGTCAGCGTTTTCACAAAAAATTGCATCTT 19771 >seq17656 Length=61091 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || || |||||||| |||||||| ||||||||| ||| ||||||||| |||||||| Sbjct 9292 TGGAGGGTGCTCTCTTTCTGAATATTGTAGTCGCTCAACGAGCGATCGTCCTCCAGTTGC 9233 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 ||||| || || |||||||||||||| || || || | ||| || || || |||||| Sbjct 9232 TTTCCCGCAAAAATCAACCGCTGTTGATCTGGCGGTATACCTTCTTTATCTTGAATTTTC 9173 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 | || || | | | |||| ||| | || | || ||||| ||||| ||| Sbjct 9172 TCTTTTACAGACTTTATAGTGTCTGTTAGCTCAGCTTCGATCGTGATCGTTTTGCCTGTC 9113 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 | || |||||||| | |||||| Sbjct 9112 AATGTTTTCACAAAAAATTGCAT 9090 >seq1004 Length=176236 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || || |||||||| |||||||| ||||||||| |||| ||||||||| |||||||| Sbjct 108920 TGGAGGGTGCTCTCTTTCTGAATATTGTAGTCGCTCAGCGAGCGATCGTCCTCCAGTTGC 108861 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 ||||| || || |||||||||||||| || || || | ||| || || || |||||| Sbjct 108860 TTTCCCGCAAAAATCAACCGCTGTTGATCTGGCGGTATACCTTCTTTATCTTGAATTTTC 108801 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 | || || | | | |||| || | || | || ||||| ||||| ||| Sbjct 108800 TCTTTTACAGACTTTATAGTGTCTGTCTGTTCAGCTTCGATCGTGATCGTTTTGCCTGTC 108741 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 | || |||||||| | |||||| Sbjct 108740 AATGTTTTCACAAAAAATTGCAT 108718 >seq3631 Length=139484 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 45119 AATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGA 45178 |||| | |||||| || || ||||| || ||||||| ||||| || |||| | Sbjct 124655 AATCACAGTACCAAATGGAGGGTGCTGTCTTTCTGAACATTGTAATCATTCAAAGATCTG 124714 Query 45179 TCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCC 45238 || || | |||||| ||||| || || |||||||||||||| || |||| | ||| || Sbjct 124715 TCATCCTTCAGTTGCTTTCCCGCAAAGATCAACCGCTGTTGATCTAGAGGTATACCTTCT 124774 Query 45239 TTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTA 45298 ||| || |||||| | ||| || ||| || |||| | ||| | || | ||| Sbjct 124775 TTGCCCTGAATTTTATCCTTCACAGCCCTTACAGTGTCTGTAGGCTCAGCGTCAATAGTA 124834 Query 45299 ATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | ||| ||||| ||||| || |||||| | | |||||| Sbjct 124835 ACCGTTTTGCCTGTCAGCGTTTTCACACAAAATTGCAT 124872 >seq454 Length=212681 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || || |||||||| |||||| | ||||| ||| ||| |||||||| |||||||| Sbjct 116509 TGGAGAGTGCTCTCTTTCTGAGTATTGTAATCGCTCAACGAACGATCGTCCTCCAGTTGC 116568 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 ||||| || || |||||||||||||| || || || | | | || || ||| |||||| Sbjct 116569 TTTCCCGCAAAAATCAACCGCTGTTGATCTGGCGGTATATCTTCTTTATCCTGAATTTTC 116628 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 | || || | | | |||| ||| | || | || ||||| ||||| ||| Sbjct 116629 TCTTTTACAGACTTTATAGTGTCTGTCTGCTCAGCGTCAATCGTGATCGTTTTGCCTGTC 116688 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 | || |||||||| | |||||| Sbjct 116689 AATGTTTTCACAAAAAATTGCAT 116711 >seq15459 Length=76120 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || |||| | ||| | ||| || || ||||||||||| |||| || ||||| |||||| Sbjct 41359 CCGCCTCGAAGTCTCAGTACGAAATGGAGCGTGCTCTCTTTCTAAAAATTGTAATCGTTC 41300 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 | | ||| || || ||||| ||||| || || ||||||||| |||| || ||| Sbjct 41299 AAAGATCTATCATCCTCGAGTTGCTTTCCCGCAAAGATCAACCGCCGTTGATCTTTAGGT 41240 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||| || || ||| |||||| | | || ||| | | ||| || ||| || Sbjct 41239 ATACCTTCTTTATCCTGAATTTTCTCTTGTACAGCCTTTATGGGGTCTGCAGGCTCAACG 41180 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || | |||||||| ||| | || || || ||| ||| | |||||| Sbjct 41179 TCGATAGTAATCGTTTTGACTGTGAGCGTTTTCGTAAAAAATTGCAT 41133 >seq22141 Length=76464 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || || |||||||| |||||||| ||||||||| ||| |||||||| |||||||| Sbjct 26733 TGGAGTGTGCTCTCTTTCTGAATATTGTAGTCGCTCAAAGAACGATCGTCCTCCAGTTGC 26674 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || || ||||||||||| || | || | ||| || || ||| |||||| Sbjct 26673 TTCCCCGCAAAGATTAACCGCTGTTGATCTGACGGTATACCTTCTTTATCCTGAATTTT 26615 >seq56889 Length=12386 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 || ||||| |||||||| || || ||| | || ||||| ||||| || || || Sbjct 6096 TCTTTCTGGATGTTGTAATCTGAAAGCGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAA 6155 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 || || ||||| ||||| || || | ||| || ||||| |||||| ||| || Sbjct 6156 ATTAAACGCTGCTGGTCTGGTGGGATACCTTCTTTGTCTTGGATTTTTGCCTTTACGTTT 6215 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | ||||| || | || || ||||||||||| || ||||||||| Sbjct 6216 TCAATGGTGTCACTGGGTTCCACTTCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTCACA 6275 Query 45326 AAGATTTGCATG 45337 ||||| |||||| Sbjct 6276 AAGATCTGCATG 6287 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 || ||||| |||||||| || || ||| | || ||||| ||||| || ||||| Sbjct 6552 TCTTTCTGGATGTTGTAATCTGAAAGAGTGCGGCCATCTTCCAGCTGTTTGCCAGCGAAA 6611 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 || || ||||| ||||| || || | ||| || ||||| |||||| ||| || Sbjct 6612 ATTAAACGCTGCTGGTCTGGTGGGATACCTTCTTTGTCTTGGATTTTTGCCTTCACGTTT 6671 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | ||| || || | || || ||||||||||| || ||||| ||| Sbjct 6672 TCAATGGTGTCACTGGGCTCTACTTCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTTACA 6731 Query 45326 AAGATTTGCAT 45336 ||||| ||||| Sbjct 6732 AAGATCTGCAT 6742 >seq13072 Length=78421 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 || || || || ||||| || |||||||| ||||| ||| ||| ||||| || ||| Sbjct 53555 ACAAAATGGAGTGTGCTTTCTTTCTGAATATTGTAATCGCTCAAGGAACGATCATCCTCC 53614 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| || || || ||||||||||||||||| || || || | || || || ||| | Sbjct 53615 AGTTGCTTCCCCGCAAATATCAACCGCTGTTGCTCTGGCGGTATCCCTTCTTTATCCTGA 53674 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || | || || | | | | ||| | || ||| | || | || ||| | || Sbjct 53675 ATCTTCTCTTTCACAGTCATTATGGTGTTCGCAGGCTCAGCGTCGATCGTGATCCTTTTC 53734 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 ||||| || |||||||| | ||||| || Sbjct 53735 ATTGTCAGCGTTTTCACAAAAAAATGCATCTT 53766 >seq11758 Length=86814 Score = 82.4 bits (90), Expect = 6e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 45140 GTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCG 45199 ||| | || |||||||| ||||||||| || |||||||| |||||||| || || Sbjct 33354 GTGTTATCTTTCTGAATATTGTAGTCGCGCAAAGAACGATCGTCCTCCAGTTGCTTCCCC 33295 Query 45200 GCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || |||||||||||||| || ||||| | ||| || || ||| Sbjct 33294 GCAAAGATCAACCGCTGTTGATCTGGAGGTATACCTTCTTTATCC 33250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394383456041965