Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq56889 95.1 9e-15
>seq56889
Length=12386
Score = 95.1 bits (104), Expect = 9e-15
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188
|| ||||||||||||||||| ||||| | | || || |||||| || || || ||
Sbjct 6318 GTAGATTCTTTTTGAATGTTATAGTCTGAAAGAGTACGACCATCTTCTAACTGCTTACCA 6377
Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248
||| | ||||| | ||| || || || | ||||||||| || || | | ||||
Sbjct 6378 GCAAAAATAAGACGTTGCTGGTCGGGTGGAATGCCTTCCTTGTCTTGGATCTTTGCCTTG 6437
Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308
|| | | | | |||||||| || || ||||| ||||| |||| || ||||||||
Sbjct 6438 ACATTTTCGATAGTGTCACTTGGTTCAACTTCAAGAGTGATTGTTTTCCCAGTCAATGTC 6497
Query 18309 TTTACAAAAATTTGCAT 18325
|| || ||||| |||||
Sbjct 6498 TTGACGAAAATCTGCAT 6514
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182
|| || || ||||||||||||||||| ||||| | | || || |||||| || ||
Sbjct 5856 TGCAGGGTAGATTCTTTTTGAATGTTATAGTCCGAAAGGGTACGACCATCTTCTAACTGC 5915
Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242
|| || ||| | || || | || || || || | ||||| || || || | |
Sbjct 5916 TTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGGATACCTTCTTTGTCTTGGATCTTT 5975
Query 18243 TGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTC 18302
|||||| | | | | |||||||| || || ||||| ||||| |||| || |||
Sbjct 5976 GCCTTGACATTTTCGATAGTGTCACTTGGTTCAACTTCAAGAGTGATTGTTTTCCCAGTC 6035
Query 18303 AATGTTTTTACAAAAATTTGCAT 18325
||||| || |||||||| |||||
Sbjct 6036 AATGTCTTAACAAAAATCTGCAT 6058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 378679800070425
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |