Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq56889 95.1 9e-15 >seq56889 Length=12386 Score = 95.1 bits (104), Expect = 9e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 || ||||||||||||||||| ||||| | | || || |||||| || || || || Sbjct 6318 GTAGATTCTTTTTGAATGTTATAGTCTGAAAGAGTACGACCATCTTCTAACTGCTTACCA 6377 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248 ||| | ||||| | ||| || || || | ||||||||| || || | | |||| Sbjct 6378 GCAAAAATAAGACGTTGCTGGTCGGGTGGAATGCCTTCCTTGTCTTGGATCTTTGCCTTG 6437 Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308 || | | | | |||||||| || || ||||| ||||| |||| || |||||||| Sbjct 6438 ACATTTTCGATAGTGTCACTTGGTTCAACTTCAAGAGTGATTGTTTTCCCAGTCAATGTC 6497 Query 18309 TTTACAAAAATTTGCAT 18325 || || ||||| ||||| Sbjct 6498 TTGACGAAAATCTGCAT 6514 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 || || || ||||||||||||||||| ||||| | | || || |||||| || || Sbjct 5856 TGCAGGGTAGATTCTTTTTGAATGTTATAGTCCGAAAGGGTACGACCATCTTCTAACTGC 5915 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242 || || ||| | || || | || || || || | ||||| || || || | | Sbjct 5916 TTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGGATACCTTCTTTGTCTTGGATCTTT 5975 Query 18243 TGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTC 18302 |||||| | | | | |||||||| || || ||||| ||||| |||| || ||| Sbjct 5976 GCCTTGACATTTTCGATAGTGTCACTTGGTTCAACTTCAAGAGTGATTGTTTTCCCAGTC 6035 Query 18303 AATGTTTTTACAAAAATTTGCAT 18325 ||||| || |||||||| ||||| Sbjct 6036 AATGTCTTAACAAAAATCTGCAT 6058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378679800070425