Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq56889 107 2e-18
seq1004 87.8 1e-12
seq8227 82.4 6e-11
>seq56889
Length=12386
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 24831 CATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAG 24890
||||||||| ||||| || || ||||| || || || ||||| | || || ||| | ||
Sbjct 5831 CATGCAGATTTTTGTCAAGACTTTAACAGGGAAGACCATAACACTTGAAGTGGAACCCAG 5772
Query 24891 CGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCA 24950
|| | | |||| ||| |||| ||||||| | ||||| ||| | || |||||
Sbjct 5771 TGATACAATTGAAAATGTCAAGGCAAAAATTCAGGACAAAGAGGGCATTCCCCCAGACCA 5712
Query 24951 GCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAG 25010
||||||| | || | ||| || || ||||| |||||| | || || ||| ||||
Sbjct 5711 GCAACGTCTTATTTTTGCTGGTAAGCAACTTGAAGATGGCCGAACCCTGTCCGACTACAA 5652
Query 25011 CATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059
|| ||||||||| |||| | ||| | ||| | || ||| | ||||||
Sbjct 5651 TATCCAGAAAGAGTCCACATTGCATCTTGTGCTGCGGTTGAGAGGAGGT 5603
>seq1004
Length=176236
Score = 87.8 bits (96), Expect = 1e-12
Identities = 144/206 (70%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
||||| | ||||| ||||| || || ||||||||||| || |||| | ||| ||
Sbjct 108718 ATGCAATTTTTTGTGAAAACATTGACAGGCAAAACGATCACGATCGAAGCTGAACAGACA 108777
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|||| | || | |||| || || |||||| | |||||||| ||||| || ||
Sbjct 108778 GACACTATAAAGTCTGTAAAAGAGAAAATTCAAGATAAAGAAGGTATACCGCCAGATCAA 108837
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACT--ATGAACGATTACA 25009
|| || || || | |||||| || |||||||| || | || || ||| ||| ||||
Sbjct 108838 CAGCGGTTGATTTTTGCGGGAAAGCAACTGGAGGA--CGATCGCTCGCTGAGCGACTACA 108895
Query 25010 GCATACAGAAAGAGGCCACGCTTCAT 25035
|| ||||||||| ||| || |||
Sbjct 108896 ATATTCAGAAAGAGAGCACCCTCCAT 108921
>seq8227
Length=99420
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/211 (69%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
||||| | ||||| ||||| || || ||||||||||| || |||| | || |
Sbjct 16957 ATGCAATTTTTTGTGAAAACATTGACAGGCAAAACGATCACGATCGACGCTGAGCCCGCA 17016
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|||| || | | || || || |||||| | |||||||| |||| || ||
Sbjct 17017 GACATCATAAAGTCCGTGAAAGAGAAAATTCAAGACAAAGAAGGTATACCTCCAGATCAA 17076
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGAT--TCCATGACTATGAACGATTACA 25009
||||| ||||| | ||||| || |||||||| | || || || ||||||||||||
Sbjct 17077 CAACGGTTAATCTTTGCGGAGAAGCAACTGGAGGGCGATCAAT--CTTTGAACGATTACA 17134
Query 25010 GCATACAGAAAGAGGCCACGCTTCATTTAGT 25040
|| ||||||||| || || ||||||||
Sbjct 17135 ATATTCAGAAAGAGAGTACACTCCATTTAGT 17165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 417571584336800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |