Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq19790 84.2 4e-11 >seq19790 Length=54031 Score = 84.2 bits (92), Expect = 4e-11 Identities = 245/372 (66%), Gaps = 8/372 (2%) Strand=Plus/Plus Query 35480 GGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGG 35539 ||| ||||||| ||||| ||| | | |||||| | | |||||||| |||| |||| Sbjct 16479 GGTGTTGATCAGTTGGCAAATGTGATTAAGACCATCAAGGAAAATCCTAGTGATCGAAGA 16538 Query 35540 ATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCAC 35599 |||||| || | |||||| || | ||| | | ||||||||||| || | || Sbjct 16539 ATGATTTTGTGCTCTTGGAATGCTCTTGATATACCAAAAATGGCTCTTCCACCTAGTAAC 16598 Query 35600 ATGACT-GCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCAGTTGTA--TCAGCGA 35656 || | || || ||||||||| ||| || ||| | || || || |||| | || | Sbjct 16599 -TGTTTAGCCCAGTTTTATGTGAGTAACGGCGAACTATCATGTCAAATGTACCTAAGGTA 16657 Query 35657 AGCGGAGATGTCGGGTTG-GGCGTGCCCTTCAATATTGCATCATACTCTCTTCTGACTCA 35715 || || || |||||| || ||||| || || ||||| || | ||| |||| || Sbjct 16658 TGCTGATAT---GGGTTGAGGTGTGCCATTTAACATTGCTAGCTATGCCCTTTTGACACA 16714 Query 35716 TCTGATGGCCAGTATGGTGGGTCTAAAACCGGGAGAGTTTATCCTCACTCTTGGTGACGC 35775 |||| || | | || ||||| ||||| ||| ||| || | || || || Sbjct 16715 CATGATCGCACATGTCACTAACCTCAAACCTGGAGATTTTGTCCATACAATAGGAGATGC 16774 Query 35776 ACACATTTATAATACCCACATTGAGGTGTTAAAGAAGCAGTTGTGCCGCGTCCCTAGACC 35835 ||||| ||| | ||| ||||| | || ||| ||||| | | | |||||| | Sbjct 16775 TCACATATATCTGAACCATATTGATGCATTGAAGGAGCAGATAAGTAGAAAGCCTAGAGC 16834 Query 35836 ATTCCCTAAGTT 35847 ||| || ||||| Sbjct 16835 ATTTCCGAAGTT 16846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 987762465000075