Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq72566 165 8e-36 seq14637 125 7e-24 seq141305 98.7 9e-16 seq50696 86.0 6e-12 seq57831 82.4 7e-11 >seq72566 Length=7134 Score = 165 bits (182), Expect = 8e-36 Identities = 582/897 (65%), Gaps = 33/897 (4%) Strand=Plus/Minus Query 13367 ttttttGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATAT 13426 |||| |||||||| || || | ||| ||||| || |||||||||| ||| | || Sbjct 894 TTTTCTGATATTCGCTCACCCGTTTCTCAAAGAAATTAGTTTTACTTTCTAAACTAATTA 835 Query 13427 TTTCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATA 13486 ||||||||| || ||||||||| ||| |||||| ||| |||| || | || | Sbjct 834 GTTCCATAAACTCAAATGGATTTTCTGAGTTAAACATTTTCGTGTAACCGAGCTGCAACA 775 Query 13487 ATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 13546 ||| || |||| || ||||| ||||| ||| | || |||||||| || | Sbjct 774 GTAAATGGTCGGCAACGAATTCAATGTATTGTTTCATCAGCGTACTGTTCATACCAATGA 715 Query 13547 GTTTTACAGG-AATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATA 13605 | || || || | || | |||||||||| ||| | |||||| ||| | | Sbjct 714 GAGCGACGGGTAAAGCTTCTAAT-AAAAATTCTTGTTCGAGTCCCACAGCTTCG---ACA 659 Query 13606 ATAATCTTAATAATGTCATTAGAAGGA-GGATAT--TTTA-----GATGTT-----TAAA 13652 | ||| ||| | | ||| |||| | ||| || || | || Sbjct 658 AAAAT-------ATGACGGACGCGGGACGGATCTGGTTTGTGGGTGAGGTAACGCGTGAA 606 Query 13653 AATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAA 13712 | || || ||||||| ||||| ||||| || |||| ||| || |||||||| || Sbjct 605 TAGCAAGCAAGCAAAATTGCAATGTAGGCCTTCGTCTCGACTGATGAGTTCGTTGCTGAA 546 Query 13713 TGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGA 13772 ||||| || || | |||||||| ||| || | |||||| || || || || ||||| || Sbjct 545 CGTTAAACCGGGGAGCAATCCTCTTTTCTTGAGCCAAAAAATGGCTGCAAACGATCCCGA 486 Query 13773 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTT 13832 |||||| | || || ||| ||| || || | | ||||| || | | || | Sbjct 485 AAAGAAAACACCTTCCACTATAGCGAAAGCAAGCAACCGTTCACCGAGGG--GCGACTCG 428 Query 13833 GTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGAT 13892 | || ||||| || |||||| || | ||| ||| || | | |||||||| Sbjct 427 GAGCGA-ATCCAATTCAAAGCCCACTCTGCTTTCTTTCGAACGCAGGGGAACGTTTCGAT 369 Query 13893 TGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCT 13952 || | || || | | | || ||| | | | |||||||| ||||| || || || Sbjct 368 GGCGTCAAACAAGTTGTATTACTGTTTTGGATCAGTGATGTATGTGTCAATGAGCAAACT 309 Query 13953 ATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTC 14012 |||||||| || || ||||| || || ||||| ||||| || ||||| |||| ||||| Sbjct 308 GTACATTTCTGAATGAATGTTCTCCATGGCTATTTGAAACCCGTAAAAGCATCGCGCTTC 249 Query 14013 TGACCATTGTACCTCC-GAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCAC 14071 | ||| | || || ||||| | | || ||||||||||| || || || | Sbjct 248 GGGTAGTTGAATTTCTTGACTAAAA-CGGGCGAGTAAATTTTCATTAACGATGCCGTCGC 190 Query 14072 TAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTC-ATTGT--TGAGTT 14128 | || || || ||||| || | | | ||| || | || ||| || ||| | | | Sbjct 189 TGGCAGCGAAGAATGCTAAAACATGTGCAATGAAATGTTTCTCGTCGGCTGTCAAGCGCT 130 Query 14129 TTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGA 14188 || ||| || |||||| || || | ||| ||||| || || |||||||| |||| Sbjct 129 CTTCCCAGTCTCGTAAATCTTTTGACAAATCAACTTCCTCTACGGTCCAAAAGGACGCGA 70 Query 14189 CAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATC 14245 | |||||||| || |||| || || |||| || ||||| | ||||||| Sbjct 69 CCGCTTTTTTGTAAGCGTCCCAAATATCAGGATATTGAATGGGAAACAAAACAAATC 13 >seq14637 Length=87010 Score = 125 bits (138), Expect = 7e-24 Identities = 363/556 (65%), Gaps = 6/556 (1%) Strand=Plus/Plus Query 13649 TAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTG 13708 |||| | ||||| || |||| || || || || | || | ||| || |||| ||| Sbjct 12816 TAAACAACAAACAAGCGAAATTGCAGTGGAGACCTCCGTCGCGACTGATGAGTTTGTTGC 12875 Query 13709 AAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATC 13768 || || || || || | || ||| ||| || | ||| || || || ||||| |||| Sbjct 12876 TGAACGTCAAACCGGGGAACAGCCCTTTTTTCTTGAGCCAGAAAATGGCTGCGAACGATC 12935 Query 13769 CGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTT 13828 |||| ||||| | || | | | || || || | |||| || | || | | Sbjct 12936 CGGAGAAGAAAACACCTTTCAATATGGCGAAAGCGAGCTACCGTTTGCCGAGGGACGACT 12995 Query 13829 TTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTT 13888 | | | |||| | ||| ||||||||||| ||||||| || ||| | |||| Sbjct 12996 TG--GACCG-TATCTAATTTAAAGCCCATTCAGCTTTTTTTCGAACGCAATGGAACGTTT 13052 Query 13889 CGATTGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTA 13948 |||| || | || |||| | |||| ||| | | |||||||| || || || | | Sbjct 13053 CGATGGCGTCAAACAAATCGTGTTTCTGTTTCGGATCAGAAATGTACGTGTCGATCAACA 13112 Query 13949 AGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAG 14008 |||| |||||||| ||||| || || || |||||||| ||||| || ||||| |||| Sbjct 13113 AGCTGTACATTTCCGAGTGAATATTCTCCATAGCTATTTGAAATCCGTAAAAGCATCGTA 13172 Query 14009 CTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCAT 14068 |||| | |||| || || | ||| | | || || ||||| || ||||| | Sbjct 13173 CTTCAGGTAATTGAACTTCTTGGCTAAACCGCGCCAGTAAATTCTCATTGACGATACCGT 13232 Query 14069 CACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTT---CATTGTTGA 14125 |||| || || || || || || | | ||||| | || | ||| | | | Sbjct 13233 CACTGGCAGCGAAGAAAGCTAAAACATGCGCGATAAAATGTTTCACTTGAGGAGTCAAGC 13292 Query 14126 GTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAG 14185 ||| || ||| ||| |||||| | || | ||| ||||| || | ||||||||| | Sbjct 13293 GTTCTTCCCAGTCGCGTAAATCTATCGACAAATCAACTTCTTCTAGGGTCCAAAAAGATG 13352 Query 14186 CGACAGCTTTTTTATA 14201 |||| |||||||| || Sbjct 13353 CGACTGCTTTTTTGTA 13368 >seq141305 Length=1168 Score = 98.7 bits (108), Expect = 9e-16 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 13929 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTG 13988 ||||||||| ||||| | | ||||||||||| ||||| || ||||| ||||||||||| Sbjct 1039 AATGTATGTGTCAATTAAGAGACTATACATTTCTGAGTGGATATTTTCCATAGCTATCTG 1098 Query 13989 AAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC 14027 |||||||| ||||||| |||||||| |||||| || Sbjct 1099 GAAACCATAGAAACATCGAGCTTCTGTAACTTGTACTTC 1137 >seq50696 Length=13760 Score = 86.0 bits (94), Expect = 6e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 ||||||| || || ||||| || || ||||| | |||||||| | |||| || | Sbjct 186 CCTCATCCCTGCTTATAAGCTCATTACTGAATGTCAGGCCTGGCATAAGACCTCTCTTCT 127 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 | | ||| ||||| | || || || || || || || ||||| |||||||||||||| | Sbjct 126 TAAGCCAGAATATAGAGGCAAAGGAACCAGAGAAAAAAATTCCTTCAACTGCAGCAAATG 67 Query 13802 CTATTAGTCGTTCTCCAAACGATGC 13826 ||| | || |||||||| ||||| Sbjct 66 CTACAACACGCTCTCCAAAAGATGC 42 >seq57831 Length=14284 Score = 82.4 bits (90), Expect = 7e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 13933 TATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAA 13992 || || ||||| ||||| || | ||||||||| ||||||||||||||||| || ||||| Sbjct 6058 TAGGTGTCAATGAGTAAACTGTGCATTTCAGAATGTATGTTTTCTATAGCAATTTGAAAT 6117 Query 13993 CCATAAAAACATC 14005 |||||||| |||| Sbjct 6118 CCATAAAAGCATC 6130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477729344250600