Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq72566 165 8e-36
seq14637 125 7e-24
seq141305 98.7 9e-16
seq50696 86.0 6e-12
seq57831 82.4 7e-11
>seq72566
Length=7134
Score = 165 bits (182), Expect = 8e-36
Identities = 582/897 (65%), Gaps = 33/897 (4%)
Strand=Plus/Minus
Query 13367 ttttttGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATAT 13426
|||| |||||||| || || | ||| ||||| || |||||||||| ||| | ||
Sbjct 894 TTTTCTGATATTCGCTCACCCGTTTCTCAAAGAAATTAGTTTTACTTTCTAAACTAATTA 835
Query 13427 TTTCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATA 13486
||||||||| || ||||||||| ||| |||||| ||| |||| || | || |
Sbjct 834 GTTCCATAAACTCAAATGGATTTTCTGAGTTAAACATTTTCGTGTAACCGAGCTGCAACA 775
Query 13487 ATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 13546
||| || |||| || ||||| ||||| ||| | || |||||||| || |
Sbjct 774 GTAAATGGTCGGCAACGAATTCAATGTATTGTTTCATCAGCGTACTGTTCATACCAATGA 715
Query 13547 GTTTTACAGG-AATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATA 13605
| || || || | || | |||||||||| ||| | |||||| ||| | |
Sbjct 714 GAGCGACGGGTAAAGCTTCTAAT-AAAAATTCTTGTTCGAGTCCCACAGCTTCG---ACA 659
Query 13606 ATAATCTTAATAATGTCATTAGAAGGA-GGATAT--TTTA-----GATGTT-----TAAA 13652
| ||| ||| | | ||| |||| | ||| || || | ||
Sbjct 658 AAAAT-------ATGACGGACGCGGGACGGATCTGGTTTGTGGGTGAGGTAACGCGTGAA 606
Query 13653 AATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAA 13712
| || || ||||||| ||||| ||||| || |||| ||| || |||||||| ||
Sbjct 605 TAGCAAGCAAGCAAAATTGCAATGTAGGCCTTCGTCTCGACTGATGAGTTCGTTGCTGAA 546
Query 13713 TGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGA 13772
||||| || || | |||||||| ||| || | |||||| || || || || ||||| ||
Sbjct 545 CGTTAAACCGGGGAGCAATCCTCTTTTCTTGAGCCAAAAAATGGCTGCAAACGATCCCGA 486
Query 13773 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTT 13832
|||||| | || || ||| ||| || || | | ||||| || | | || |
Sbjct 485 AAAGAAAACACCTTCCACTATAGCGAAAGCAAGCAACCGTTCACCGAGGG--GCGACTCG 428
Query 13833 GTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGAT 13892
| || ||||| || |||||| || | ||| ||| || | | ||||||||
Sbjct 427 GAGCGA-ATCCAATTCAAAGCCCACTCTGCTTTCTTTCGAACGCAGGGGAACGTTTCGAT 369
Query 13893 TGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCT 13952
|| | || || | | | || ||| | | | |||||||| ||||| || || ||
Sbjct 368 GGCGTCAAACAAGTTGTATTACTGTTTTGGATCAGTGATGTATGTGTCAATGAGCAAACT 309
Query 13953 ATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTC 14012
|||||||| || || ||||| || || ||||| ||||| || ||||| |||| |||||
Sbjct 308 GTACATTTCTGAATGAATGTTCTCCATGGCTATTTGAAACCCGTAAAAGCATCGCGCTTC 249
Query 14013 TGACCATTGTACCTCC-GAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCAC 14071
| ||| | || || ||||| | | || ||||||||||| || || || |
Sbjct 248 GGGTAGTTGAATTTCTTGACTAAAA-CGGGCGAGTAAATTTTCATTAACGATGCCGTCGC 190
Query 14072 TAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTC-ATTGT--TGAGTT 14128
| || || || ||||| || | | | ||| || | || ||| || ||| | | |
Sbjct 189 TGGCAGCGAAGAATGCTAAAACATGTGCAATGAAATGTTTCTCGTCGGCTGTCAAGCGCT 130
Query 14129 TTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGA 14188
|| ||| || |||||| || || | ||| ||||| || || |||||||| ||||
Sbjct 129 CTTCCCAGTCTCGTAAATCTTTTGACAAATCAACTTCCTCTACGGTCCAAAAGGACGCGA 70
Query 14189 CAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATC 14245
| |||||||| || |||| || || |||| || ||||| | |||||||
Sbjct 69 CCGCTTTTTTGTAAGCGTCCCAAATATCAGGATATTGAATGGGAAACAAAACAAATC 13
>seq14637
Length=87010
Score = 125 bits (138), Expect = 7e-24
Identities = 363/556 (65%), Gaps = 6/556 (1%)
Strand=Plus/Plus
Query 13649 TAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTG 13708
|||| | ||||| || |||| || || || || | || | ||| || |||| |||
Sbjct 12816 TAAACAACAAACAAGCGAAATTGCAGTGGAGACCTCCGTCGCGACTGATGAGTTTGTTGC 12875
Query 13709 AAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATC 13768
|| || || || || | || ||| ||| || | ||| || || || ||||| ||||
Sbjct 12876 TGAACGTCAAACCGGGGAACAGCCCTTTTTTCTTGAGCCAGAAAATGGCTGCGAACGATC 12935
Query 13769 CGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTT 13828
|||| ||||| | || | | | || || || | |||| || | || | |
Sbjct 12936 CGGAGAAGAAAACACCTTTCAATATGGCGAAAGCGAGCTACCGTTTGCCGAGGGACGACT 12995
Query 13829 TTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTT 13888
| | | |||| | ||| ||||||||||| ||||||| || ||| | ||||
Sbjct 12996 TG--GACCG-TATCTAATTTAAAGCCCATTCAGCTTTTTTTCGAACGCAATGGAACGTTT 13052
Query 13889 CGATTGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTA 13948
|||| || | || |||| | |||| ||| | | |||||||| || || || | |
Sbjct 13053 CGATGGCGTCAAACAAATCGTGTTTCTGTTTCGGATCAGAAATGTACGTGTCGATCAACA 13112
Query 13949 AGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAG 14008
|||| |||||||| ||||| || || || |||||||| ||||| || ||||| ||||
Sbjct 13113 AGCTGTACATTTCCGAGTGAATATTCTCCATAGCTATTTGAAATCCGTAAAAGCATCGTA 13172
Query 14009 CTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCAT 14068
|||| | |||| || || | ||| | | || || ||||| || ||||| |
Sbjct 13173 CTTCAGGTAATTGAACTTCTTGGCTAAACCGCGCCAGTAAATTCTCATTGACGATACCGT 13232
Query 14069 CACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTT---CATTGTTGA 14125
|||| || || || || || || | | ||||| | || | ||| | | |
Sbjct 13233 CACTGGCAGCGAAGAAAGCTAAAACATGCGCGATAAAATGTTTCACTTGAGGAGTCAAGC 13292
Query 14126 GTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAG 14185
||| || ||| ||| |||||| | || | ||| ||||| || | ||||||||| |
Sbjct 13293 GTTCTTCCCAGTCGCGTAAATCTATCGACAAATCAACTTCTTCTAGGGTCCAAAAAGATG 13352
Query 14186 CGACAGCTTTTTTATA 14201
|||| |||||||| ||
Sbjct 13353 CGACTGCTTTTTTGTA 13368
>seq141305
Length=1168
Score = 98.7 bits (108), Expect = 9e-16
Identities = 81/99 (82%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 13929 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTG 13988
||||||||| ||||| | | ||||||||||| ||||| || ||||| |||||||||||
Sbjct 1039 AATGTATGTGTCAATTAAGAGACTATACATTTCTGAGTGGATATTTTCCATAGCTATCTG 1098
Query 13989 AAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC 14027
|||||||| ||||||| |||||||| |||||| ||
Sbjct 1099 GAAACCATAGAAACATCGAGCTTCTGTAACTTGTACTTC 1137
>seq50696
Length=13760
Score = 86.0 bits (94), Expect = 6e-12
Identities = 106/145 (73%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741
||||||| || || ||||| || || ||||| | |||||||| | |||| || |
Sbjct 186 CCTCATCCCTGCTTATAAGCTCATTACTGAATGTCAGGCCTGGCATAAGACCTCTCTTCT 127
Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801
| | ||| ||||| | || || || || || || || ||||| |||||||||||||| |
Sbjct 126 TAAGCCAGAATATAGAGGCAAAGGAACCAGAGAAAAAAATTCCTTCAACTGCAGCAAATG 67
Query 13802 CTATTAGTCGTTCTCCAAACGATGC 13826
||| | || |||||||| |||||
Sbjct 66 CTACAACACGCTCTCCAAAAGATGC 42
>seq57831
Length=14284
Score = 82.4 bits (90), Expect = 7e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 13933 TATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAA 13992
|| || ||||| ||||| || | ||||||||| ||||||||||||||||| || |||||
Sbjct 6058 TAGGTGTCAATGAGTAAACTGTGCATTTCAGAATGTATGTTTTCTATAGCAATTTGAAAT 6117
Query 13993 CCATAAAAACATC 14005
|||||||| ||||
Sbjct 6118 CCATAAAAGCATC 6130
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 477729344250600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |