Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq15631 118 8e-22 seq454 116 3e-21 seq13072 107 1e-18 seq11758 104 2e-17 seq17656 102 6e-17 seq22141 98.7 8e-16 seq1004 93.3 3e-14 seq9166 86.0 5e-12 seq3631 84.2 2e-11 seq8227 82.4 6e-11 >seq15631 Length=58196 Score = 118 bits (130), Expect = 8e-22 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || || ||||| || |||||||||| ||||| || || || | ||||||||| | Sbjct 20000 CCACCTCGAAGTCTCAAAACCAAATGGAGTGTGCTTTCTTTCTGAATATTGTAATCACTC 19941 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || | ||| || || |||| ||| || || ||||| ||||| |||||||| || | || Sbjct 19940 AAGGAACGATCATCCTCCAGTTGCTTCCCCGCAAATATCAACCGCTGTTGCTCTGGAGGT 19881 Query 43003 ACACCTTCTTTTTCGCTGA-TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | || ||||| || |||| || |||||| || | | || || || ||| | Sbjct 19880 ATCCCCTCTTTATC-CTGAATCTTCTCTTTCACAGTCATTATGGTTTCTGTAGGCTCAGC 19822 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTTC 43113 ||| | ||| || ||||| || || || ||||||||||||| |||||| ||| Sbjct 19821 GTCAATCGTGATCGTTTTGCCTGTCAGCGTTTTCACAAAAAATTGCATCTTC 19770 >seq454 Length=212681 Score = 116 bits (128), Expect = 3e-21 Identities = 169/233 (73%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || || |||| | || | ||||| ||||||||| || || |||||||||| | Sbjct 116485 CCGCCTCGAAGTCGCAGGACGAGATGGAGAGTGCTCTCTTTCTGAGTATTGTAATCGCTC 116544 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || | ||| ||||| |||| ||| || || ||||||||||| ||||||||||| | ||| Sbjct 116545 AACGAACGATCGTCCTCCAGTTGCTTTCCCGCAAAAATCAACCGCTGTTGATCTGGCGGT 116604 Query 43003 ACACCTTCTTTTTCGCTG-ATCAACTCTTT----GACTCTGCCAACTGTGTC-GCCAGCC 43056 | | ||||||| || ||| || |||||| |||| | | ||||| | | | | Sbjct 116605 ATATCTTCTTTATC-CTGAATTTTCTCTTTTACAGACTTT----ATAGTGTCTGTCTG-C 116658 Query 43057 TCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || |||| | ||| || ||||| || || | ||||||||||||| |||||| Sbjct 116659 TCAGCGTCAATCGTGATCGTTTTGCCTGTCAATGTTTTCACAAAAAATTGCAT 116711 >seq13072 Length=78421 Score = 107 bits (118), Expect = 1e-18 Identities = 161/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 42889 CGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTA 42948 || ||||| | || ||||||| ||||| || || || | |||||||||| ||| | | Sbjct 53543 CGAAGTCTCAGAACAAAATGGAGTGTGCTTTCTTTCTGAATATTGTAATCGCTCAAGGAA 53602 Query 42949 CGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCT 43008 || || || |||| ||| || || ||||| ||||| |||||||| || | ||| | ||| Sbjct 53603 CGATCATCCTCCAGTTGCTTCCCCGCAAATATCAACCGCTGTTGCTCTGGCGGTATCCCT 53662 Query 43009 TCTTTTTCGCTGA-TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTAC 43067 ||||| || |||| || |||||| || | | |||| ||| ||| |||| | Sbjct 53663 TCTTTATC-CTGAATCTTCTCTTTCACAGTCATTATGGTGTTCGCAGGCTCAGCGTCGAT 53721 Query 43068 CGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTTC 43113 ||| || |||| || || ||||||||||||| ||||| ||| Sbjct 53722 CGTGATCCTTTTCATTGTCAGCGTTTTCACAAAAAAATGCATCTTC 53767 >seq11758 Length=86814 Score = 104 bits (114), Expect = 2e-17 Identities = 167/236 (71%), Gaps = 18/236 (8%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || || || || | || | ||||| ||| | || || || | |||||| ||| | Sbjct 33384 CCGCCTCGAAGCCTCAGTACGAGATGGAATGTGTTATCTTTCTGAATATTGTAGTCGCGC 33325 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || | ||| ||||| |||| ||| || || ||||| ||||| ||||||||||| | || Sbjct 33324 AAAGAACGATCGTCCTCCAGTTGCTTCCCCGCAAAGATCAACCGCTGTTGATCTGGAGGT 33265 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCA---ACT-----GTGTC-GCCA 43053 | ||||||||| || ||| ||| |||| ||| ||| ||||| | || Sbjct 33264 ATACCTTCTTTATC-CTG-------GTTTTTCTCTTCCACAGACTTTATAGTGTCTGTCA 33213 Query 43054 GCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | ||| |||| | ||| || |||||||| || | |||||||||||||| |||||| Sbjct 33212 G-CTCAGCGTCGATCGTGATCGTTTTTCCTGTCAAAGTTTTCACAAAAAATTGCAT 33158 >seq17656 Length=61091 Score = 102 bits (112), Expect = 6e-17 Identities = 150/209 (72%), Gaps = 10/209 (5%) Strand=Plus/Minus Query 42906 ATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTG 42965 ||||| |||||||| || || | |||||| ||| ||| | || ||||| |||| ||| Sbjct 9293 ATGGAGGGTGCTCTCTTTCTGAATATTGTAGTCGCTCAACGAGCGATCGTCCTCCAGTTG 9234 Query 42966 TTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAA 43025 || || ||||||||||| ||||||||||| | ||| | ||||||||| || || Sbjct 9233 CTTTCCCGCAAAAATCAACCGCTGTTGATCTGGCGGTATACCTTCTTTATCTTGAATTTT 9174 Query 43026 CTCTTT----GACTCTGCCAACTGTGTC-GCCAGCCTCGACGTCTACCGTTATAGTTTTT 43080 |||||| |||| | | ||||| | || ||| | || | ||| || ||||| Sbjct 9173 CTCTTTTACAGACTTT----ATAGTGTCTGTTAG-CTCAGCTTCGATCGTGATCGTTTTG 9119 Query 43081 CCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || | ||||||||||||| |||||| Sbjct 9118 CCTGTCAATGTTTTCACAAAAAATTGCAT 9090 >seq22141 Length=76464 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/207 (72%), Gaps = 5/207 (2%) Strand=Plus/Minus Query 42906 ATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTG 42965 ||||| |||||||| || || | |||||| ||| ||| | ||| ||||| |||| ||| Sbjct 26734 ATGGAGTGTGCTCTCTTTCTGAATATTGTAGTCGCTCAAAGAACGATCGTCCTCCAGTTG 26675 Query 42966 TTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCA 43024 || || ||||| || || ||||||||||| | ||| | ||||||||| || ||| || Sbjct 26674 CTTCCCCGCAAAGATTAACCGCTGTTGATCTGACGGTATACCTTCTTTATC-CTGAATTT 26616 Query 43025 ACTCTTTGACTCTGCCAACTGTGTC-GCCAGCCTCGACGTCTACCGTTATAGTTTTTCCG 43083 |||||| || | ||||| | ||| ||| |||| | ||| || ||||| | Sbjct 26615 TCTCTTTCACAGATTTTATAGTGTCTGTCAG-CTCAGCGTCGATCGTGATCGTTTTGTCT 26557 Query 43084 GTTAGAGTTTTCAC-AAAAATTTGCAT 43109 || | |||||||| ||||| |||||| Sbjct 26556 GTCAACGTTTTCACAAAAAAATTGCAT 26530 >seq1004 Length=176236 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/209 (71%), Gaps = 10/209 (5%) Strand=Plus/Minus Query 42906 ATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTG 42965 ||||| |||||||| || || | |||||| ||| || | || ||||| |||| ||| Sbjct 108921 ATGGAGGGTGCTCTCTTTCTGAATATTGTAGTCGCTCAGCGAGCGATCGTCCTCCAGTTG 108862 Query 42966 TTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAA 43025 || || ||||||||||| ||||||||||| | ||| | ||||||||| || || Sbjct 108861 CTTTCCCGCAAAAATCAACCGCTGTTGATCTGGCGGTATACCTTCTTTATCTTGAATTTT 108802 Query 43026 CTCTTT----GACTCTGCCAACTGTGTC-GCCAGCCTCGACGTCTACCGTTATAGTTTTT 43080 |||||| |||| | | ||||| | | | || | || | ||| || ||||| Sbjct 108801 CTCTTTTACAGACTTT----ATAGTGTCTGTCTG-TTCAGCTTCGATCGTGATCGTTTTG 108747 Query 43081 CCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || | ||||||||||||| |||||| Sbjct 108746 CCTGTCAATGTTTTCACAAAAAATTGCAT 108718 >seq9166 Length=72308 Score = 86.0 bits (94), Expect = 5e-12 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || | |||||| | || | || | |||| | || ||||| | ||| ||||| | Sbjct 29273 CCACCTCTCAGTCTCAGAACAAGGTGTAAAGTGTTTTCTTTTTGAATATTATAATCATTC 29332 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 ||| | || | || ||||| ||||||||||||||||| | ||||||||| || | || Sbjct 29333 AATATCCGATTATCTTCCAACTGTTTGCCGGCAAAAATAAGTCGCTGTTGTTCAGGTGGA 29392 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||||| || || | ||| || | ||| ||||| | ||| || Sbjct 29393 ATTCCTTCTTTATCTTGAATTTGTTTTTTAACAATTTCAATGGTGTCTGTCGGCTCAACA 29452 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGC 43107 || | || || ||||| || ||| |||||||||||| | |||| Sbjct 29453 TCGATAGTAATTGTTTTCCCACTTAAAGTTTTCACAAATAATTGC 29497 >seq3631 Length=139484 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 |||||||||| ||||| || || || ||||||||||| ||| | | || || | | Sbjct 124664 ACCAAATGGAGGGTGCTGTCTTTCTGAACATTGTAATCATTCAAAGATCTGTCATCCTTC 124723 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 | ||| || || ||||| ||||| ||||||||||| || | |||||| ||| | ||| Sbjct 124724 AGTTGCTTTCCCGCAAAGATCAACCGCTGTTGATCTAGAGGTATACCTTC-TTTGCCCTG 124782 Query 43021 -ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTT 43079 || || || || | || ||||| || ||| |||| | || | ||||| Sbjct 124783 AATTTTATCCTTCACAGCCCTTACAGTGTCTGTAGGCTCAGCGTCAATAGTAACCGTTTT 124842 Query 43080 TCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || || ||||||||| ||| |||||| Sbjct 124843 GCCTGTCAGCGTTTTCACACAAAATTGCAT 124872 >seq8227 Length=99420 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/231 (68%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || || | ||| | || ||||||| || ||||| || || | |||||||||| | Sbjct 17183 CCGCCTCGAATTCTCAGTACTAAATGGAGTGTACTCTCTTTCTGAATATTGTAATCGTTC 17124 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || | | ||| | |||| ||| || | ||||| || || || |||||||| | || Sbjct 17123 AAAGATTGATCGCCCTCCAGTTGCTTCTCCGCAAAGATTAACCGTTGTTGATCTGGAGGT 17064 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTT----GACTCTGCCAACTGTGTCGCCAGCCTC 43058 | ||||||||| || || |||||| |||| | | |||| | | ||| Sbjct 17063 ATACCTTCTTTGTCTTGAATTTTCTCTTTCACGGACTTTATGA----TGTCTGCGGGCTC 17008 Query 43059 GACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| | ||| || ||||| || || | ||||||||||||| |||||| Sbjct 17007 AGCGTCGATCGTGATCGTTTTGCCTGTCAATGTTTTCACAAAAAATTGCAT 16957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380701853412570