Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq56889 113 5e-20
seq52744 93.3 4e-14
seq8227 93.3 4e-14
seq1004 93.3 4e-14
seq15708 91.5 1e-13
seq56511 87.8 2e-12
seq23149 87.8 2e-12
seq17656 87.8 2e-12
seq7405 82.4 8e-11
>seq56889
Length=12386
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
||||||| || |||| || | ||| | ||| || ||||| || || ||||| ||| |
Sbjct 5604 CCTCCTCTCAACCGCAGCACAAGATGCAATGTGGACTCTTTCTGGATATTGTAGTCGGAC 5663
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | ||||| ||||| ||||||||| | || ||||||||||| || || ||
Sbjct 5664 AGGGTTCGGCCATCTTCAAGTTGCTTACCAGCAAAAATAAGACGTTGCTGGTCTGGGGGA 5723
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
||||| |||||||| ||||||| || | | ||| | || || ||||||| |||
Sbjct 5724 ATGCCCTCTTTGTCCTGAATTTTTGCCTTGACATTTTCAATTGTATCACTGGGTTCCACT 5783
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|||| || | ||||| || || || || || || || || |||||
Sbjct 5784 TCAAGTGTTATGGTCTTCCCTGTTAAAGTCTTGACAAAAATCTGCAT 5830
Score = 109 bits (120), Expect = 6e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016
|||||| | | ||||| || | ||| | ||||||||||| || |||||||||||
Sbjct 6059 GCCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGA 6118
Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
| |||| ||||| || ||||| |||||| | || | ||| ||||| || || ||
Sbjct 6119 AAGCGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGG 6178
Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
|| ||||||||||| |||||| |||| | ||| | ||||| ||||||| ||
Sbjct 6179 GATACCTTCTTTGTCTTGGATTTTTGCCTTTACGTTTTCAATGGTGTCACTGGGTTCCAC 6238
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
||||| || | |||||||| || | || || || || || |||||
Sbjct 6239 TTCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 6286
Score = 107 bits (118), Expect = 2e-18
Identities = 163/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016
|||||||| | | ||| || | || | |||||||||||||| ||||| || || |
Sbjct 6287 GCCTCCTCTAAGCCTCAACACAAGGTGCAAGGTAGATTCTTTTTGAATGTTATAGTC--T 6344
Query 143017 CATTGTGCTCGAG--TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074
| | | ||| ||||| | || ||||||||| | || ||||||||||| |||||
Sbjct 6345 GAAAGAGTACGACCATCTTCTAACTGCTTACCAGCAAAAATAAGACGTTGCTGGTCGGGT 6404
Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134
|| |||||||| ||||| || ||| || | | ||| | ||||| | |||||
Sbjct 6405 GGAATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTTGGTTCA 6464
Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
||||||| ||| | || || || |||||||| || ||||| || |||||
Sbjct 6465 ACTTCAAGAGTGATTGTTTTCCCAGTCAATGTCTTGACGAAAATCTGCAT 6514
Score = 107 bits (118), Expect = 2e-18
Identities = 163/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016
|||||| | | ||||| || | ||| | ||||||||||| || |||||||||||
Sbjct 6515 GCCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGA 6574
Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
| |||| ||||| || ||||| ||||| | || | ||| ||||| || || ||
Sbjct 6575 AAGAGTGCGGCCATCTTCCAGCTGTTTGCCAGCGAAAATTAAACGCTGCTGGTCTGGTGG 6634
Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
|| ||||||||||| |||||| || | | ||| | ||||| |||| |||||
Sbjct 6635 GATACCTTCTTTGTCTTGGATTTTTGCCTTCACGTTTTCAATGGTGTCACTGGGCTCTAC 6694
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188
||||| || | |||||||| || | || ||||| || || |||||| ||
Sbjct 6695 TTCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTTACAAAGATCTGCATACCT 6746
Score = 95.1 bits (104), Expect = 1e-14
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| ||| | |||||| || || | ||| |||||||| ||||||||||| || |
Sbjct 2967 CCACCTCTTAACCTCAAAACCAAGTGCAATGTGGATTCTTTCTGTATGTTGTAGTCTGAC 3026
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| ||| | ||||| | || || || ||| | || ||||||||||| || |||||
Sbjct 3027 AGTGTTCGGCCATCTTCTAACTGCTTGCCTGCAAAAATAAGACGTTGCTGGTCTGGAGGA 3086
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| |||||| ||| | | || | ||||| ||||||| ||
Sbjct 3087 ATACCTTCTTTGTCTTGTATTTTTGCTTTCACGTTCTCGATAGTGTCACTGGGTTCAACC 3146
Query 143138 TCAACAGTCACCGTCTTGCC 143157
|| | || | || |||||
Sbjct 3147 TCCAAGGTTATGGTTTTGCC 3166
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 143031
||| || | ||| | |||||||||||||| ||||| || || | || | ||
Sbjct 5846 CAACACAAGATGCAGGGTAGATTCTTTTTGAATGTTATAGTCCGAAAGGGTACGACCATC 5905
Query 143032 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091
||| | || || |||||| | |||||||| ||||| || || || || |||||||||||
Sbjct 5906 TTCTAACTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGGATACCTTCTTTGTC 5965
Query 143092 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGT 143151
|| ||| || | | ||| | ||||| | ||||| ||||||| ||| | ||
Sbjct 5966 TTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTTGGTTCAACTTCAAGAGTGATTGT 6025
Query 143152 CTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| || |||||||| || || || || |||||
Sbjct 6026 TTTCCCAGTCAATGTCTTAACAAAAATCTGCAT 6058
>seq52744
Length=12040
Score = 93.3 bits (102), Expect = 4e-14
Identities = 133/185 (72%), Gaps = 2/185 (1%)
Strand=Plus/Plus
Query 156137 GGAGAGACGGTAAATTGCTGCGAATTGGCCGCCGGAAGTGTGCGAAAATAGTACATGCCG 156196
||| | || ||||| |||| | ||| || ||||| | || | |||||||||||
Sbjct 3238 GGACACACAGTAAACTGCTCAGCATTCGCTGCCGGTTTACTACGGAGGTAGTACATGCCC 3297
Query 156197 GTTTTGAGGCCGCGCTTCCAACCGTACATGTGCACCGACGCCATTTTAGGCAAAG-TAGG 156255
|| || || || |||||||||||| | |||| || || ||| ||| | | ||
Sbjct 3298 GTCTTCAGTCCTAACTTCCAACCGTAAAAATGCATGCTCGTCAGTTT-GGCTTCGCTCGG 3356
Query 156256 GTTTGCCATGTACACGTTGAACGATTGACTTTGATCGATAAATGCTCCCCTGTCTGCTGC 156315
| |||||||||||||| | ||||||||||||||| ||||| || || | || |||||
Sbjct 3357 CTCCGCCATGTACACGTTCATCGATTGACTTTGATCAATAAAAGCGCCACGATCGGCTGC 3416
Query 156316 CATTT 156320
|||||
Sbjct 3417 CATTT 3421
>seq8227
Length=99420
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| ||||| | | || |||||||| | |||| ||||| || || ||||||||| ||
Sbjct 17183 CCGCCTCGAATTCTCAGTACTAAATGGAGTGTACTCTCTTTCTGAATATTGTAATCGTTC 17124
Query 143018 ATTG--TGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 143075
| | || ||| | || ||||| || | ||| |||| | ||||| ||||| ||||
Sbjct 17123 AAAGATTGATCGC--CCTCCAGTTGCTTCTCCGCAAAGATTAACCGTTGTTGATCTGGAG 17066
Query 143076 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTA 143135
|||| ||||||||||| |||||| | ||| | | | |||| | ||| ||
Sbjct 17065 GTATACCTTCTTTGTCTTGAATTTTCTCTTTCACGGACTTTATGATGTCTGCGGGCTCAG 17006
Query 143136 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
| || | || | ||| ||||| ||||||||||| || || | ||||||
Sbjct 17005 CGTCGATCGTGATCGTTTTGCCTGTCAATGTTTTCACAAAAAATTGCAT 16957
>seq1004
Length=176236
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 142994 TCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAG 143053
||||| || || ||||| ||||||| | || ||| || ||||| || || ||| |
Sbjct 108908 TCTTTCTGAATATTGTAGTCGCTCAGCGAGCGATCGTCCTCCAGTTGCTTTCCCGCAAAA 108849
Query 143054 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGT 143113
|||| || || ||||| || ||||| |||||||| || |||||| | |||||
Sbjct 108848 ATCAACCGCTGTTGATCTGGCGGTATACCTTCTTTATCTTGAATTTTCTCTTTTACAGAC 108789
Query 143114 TCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACG 143173
| | ||||| || |||| |||| | || | ||| ||||| ||||||||||| ||
Sbjct 108788 TTTATAGTGTCTGTCTGTTCAGCTTCGATCGTGATCGTTTTGCCTGTCAATGTTTTCACA 108729
Query 143174 AATATTTGCAT 143184
|| | ||||||
Sbjct 108728 AAAAATTGCAT 108718
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/189 (72%), Gaps = 3/189 (2%)
Strand=Plus/Minus
Query 156136 TGGAGAGACGGTAAATTGCTGCGAATTGGCCGCCGGAAGTGTGCGAAAATAGTACATGCC 156195
|||| | |||||||| |||| | || || ||||| | || | |||||||||||
Sbjct 32120 TGGACACACGGTAAACTGCTCGGCGTTCGCTGCCGGTTTGTTCCGGAGGTAGTACATGCC 32061
Query 156196 GGTTTTGAGGCCGCGCTTCCAACCGTACATGTGCACCGACGCCATTTTAGGCAAAG-TAG 156254
|| ||||| || |||||||||||| | ||||| || || ||| ||| | | |
Sbjct 32060 CGTCTTGAGTCCCAACTTCCAACCGTAAAAGTGCATGCTCGTCAGTTT-GGCTTCGCTCG 32002
Query 156255 GGTTTGCCATGTACACGTTGAACGATTGACTTTGATCGATAAATGCTCCCCTGTCTGCTG 156314
| | ||||||||||| ||| | ||| ||||| ||||||||||||| || | || || |
Sbjct 32001 GATCTGCCATGTACATGTTCATCGACTGACTCTGATCGATAAATGGACCGCGATCGGCCG 31942
Query 156315 CCAT-TTCA 156322
|||| ||||
Sbjct 31941 CCATCTTCA 31933
>seq15708
Length=44177
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/189 (72%), Gaps = 3/189 (2%)
Strand=Plus/Plus
Query 156136 TGGAGAGACGGTAAATTGCTGCGAATTGGCCGCCGGAAGTGTGCGAAAATAGTACATGCC 156195
|||| | || ||||| | || | ||| |||||||| | || | |||||||||||
Sbjct 33786 TGGACACACAGTAAACTACTCGGCATTCGCCGCCGGTTTGCTCCGGAGGTAGTACATGCC 33845
Query 156196 GGTTTTGAGGCCGCGCTTCCAACCGTACATGTGCACCGACGCCATTTTAGGCAAAG-TAG 156254
|| ||||| || |||||||||||| | ||||| || || ||| ||| | | |
Sbjct 33846 CGTCTTGAGTCCTAACTTCCAACCGTAAAAGTGCATGCTCGTCAGTTT-GGCTTCGCTCG 33904
Query 156255 GGTTTGCCATGTACACGTTGAACGATTGACTTTGATCGATAAATGCTCCCCTGTCTGCTG 156314
| | |||||||||||||| | ||| ||||| ||||||||||||| || | || || |
Sbjct 33905 GATCCGCCATGTACACGTTCATCGACTGACTCTGATCGATAAATGGACCGCGATCGGCCG 33964
Query 156315 CCAT-TTCA 156322
|||| ||||
Sbjct 33965 CCATCTTCA 33973
>seq56511
Length=8202
Score = 87.8 bits (96), Expect = 2e-12
Identities = 145/207 (70%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 142979 AAATGAATTGTAGATTCTTTTTGTATGTTGTAATC-GCTCATTGTGCTCGAGTCTTCGAG 143037
||||| | || |||| ||| | ||||||||||| | | ||| | |||| ||
Sbjct 3185 AAATGTAGAGTTGATTTTTTCTAAATGTTGTAATCCGAGAACTGTACGACCACCTTCAAG 3126
Query 143038 TTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAAT 143097
||||||||||||| | ||||| ||||||||||| | || |||| |||||| || ||
Sbjct 3125 TTGTTTACCAGCAAAAATCAGGCGTTGCTGATCTGAAGAAATGCTTTCTTTATCTTGGAT 3066
Query 143098 TTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCC 143157
||| ||| | | ||| || | || ||| |||||| || | ||| | || || ||
Sbjct 3065 CTTTGCTTTGACATTTTCAACTGAGTTACTGGATTCTACCTCCAAAGTGATGGTTTTACC 3006
Query 143158 GGTCAATGTTTTTACGAATATTTGCAT 143184
|| || ||||| ||||| || |||||
Sbjct 3005 AGTTAAAGTTTTGACGAA-ATCTGCAT 2980
>seq23149
Length=43904
Score = 87.8 bits (96), Expect = 2e-12
Identities = 148/213 (69%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 143031
|||||| | ||| | || ||||||||| || || |||||||| | | | || ||
Sbjct 19857 CAAAACAAGATGTAAAGTGTTTTCTTTTTGAATATTATAATCGCTTAATATCCTATCATC 19916
Query 143032 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091
|| | ||||| |||||| | || || |||||||||||||| || || |||||||||||
Sbjct 19917 CTCCAACTGTTTGCCAGCAAAAATAAGCCGTTGCTGATCGGGTGGAATTCCTTCTTTGTC 19976
Query 143092 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGT 143151
||||| || ||||| | || || || |||| || || | ||| | ||
Sbjct 19977 TTGAATTTGTT-TTTTAACACTTTCA-----ATAGTTGGTTGAACATCGATAGTGATTGT 20030
Query 143152 CTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| || |||| ||||| || |||| ||||||
Sbjct 20031 TTTTCCATTCAAAGTTTTCACAAATAATTGCAT 20063
>seq17656
Length=61091
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 142994 TCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAG 143053
||||| || || ||||| ||||||| | || ||| || ||||| || || ||| |
Sbjct 9280 TCTTTCTGAATATTGTAGTCGCTCAACGAGCGATCGTCCTCCAGTTGCTTTCCCGCAAAA 9221
Query 143054 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGT 143113
|||| || || ||||| || ||||| |||||||| || |||||| | |||||
Sbjct 9220 ATCAACCGCTGTTGATCTGGCGGTATACCTTCTTTATCTTGAATTTTCTCTTTTACAGAC 9161
Query 143114 TCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACG 143173
| | ||||| || | || |||| | || | ||| ||||| ||||||||||| ||
Sbjct 9160 TTTATAGTGTCTGTTAGCTCAGCTTCGATCGTGATCGTTTTGCCTGTCAATGTTTTCACA 9101
Query 143174 AATATTTGCAT 143184
|| | ||||||
Sbjct 9100 AAAAATTGCAT 9090
>seq7405
Length=74570
Score = 82.4 bits (90), Expect = 8e-11
Identities = 131/187 (70%), Gaps = 1/187 (1%)
Strand=Plus/Plus
Query 156137 GGAGAGACGGTAAATTGCTGCGAATTGGCCGCCGGAAGTGTGCGAAAATAGTACATGCCG 156196
||| | |||||||| ||| | || || ||||| | || | |||||||||||
Sbjct 57501 GGACACACGGTAAACTGCACTGTGTTCGCTGCCGGTTTGCTCCGGAGGTAGTACATGCCC 57560
Query 156197 GTTTTGAGGCCGCGCTTCCAACCGTACATGTGCACCGACGCCATTTTAGGCAAAGTAGGG 156256
|| ||||| || |||||||||||| | ||||| || || ||| | | ||
Sbjct 57561 GTCTTGAGTCCCAACTTCCAACCGTAAAAGTGCATGTTCGTCAATTTGGCTTCTCTCGGA 57620
Query 156257 TTTGCCATGTACACGTTGAACGATTGACTTTGATCGATAAATGCTCCCCTGTCTGCTGCC 156316
| ||||| |||||||| | ||| ||||| ||||||||||| || || | || ||||||
Sbjct 57621 TCCGCCATTTACACGTTCATCGACTGACTCTGATCGATAAAAGCGCCGCGATCGGCTGCC 57680
Query 156317 AT-TTCA 156322
|| ||||
Sbjct 57681 ATCTTCA 57687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506103897202800
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