Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_004813.1
Length=57930
Score E
Sequences producing significant alignments: (Bits) Value
seq140194 223 1e-53
>seq140194
Length=4052
Score = 223 bits (246), Expect = 1e-53
Identities = 329/470 (70%), Gaps = 31/470 (7%)
Strand=Plus/Plus
Query 5551 TTCGACAATGCGCTCGGCTTCATCCTTGTCATAGATACCAGCAAATCCGAAGGCCAGACG 5610
||| || |||||||| || || |||| |||||||||||| | | |||||||||| ||
Sbjct 2332 TTCTACGATGCGCTCTGCCTCGTCCTGGTCATAGATACCGCCGTACCCGAAGGCCAAGCG 2391
Query 5611 GGCACACTGAATCATGGCTTTATGCCGTAACATCCGTTTGGGATGCGACTGCCACGGCCC 5670
|||||||| ||||||||||| || || | ||| || || ||||| ||||| || ||
Sbjct 2392 TGCACACTGGATCATGGCTTTGTGGCGCAGCATGCGGCGCGGGTGCGATTGCCAGGGGCC 2451
Query 5671 GGTGATTTCTCTGCCTTCGCGGGTTTTGAATGGTTCGCGGCGGCATTCATCCATCCATTC 5730
|| || | ||| | ||| || ||||||| ||
Sbjct 2452 CATG---------CCATTGCGCTT------------------GCACTCGGCCATCCACTC 2484
Query 5731 GGTAACGCAGATCGGATGATTACGGTCCTTGCGGTAAATCCGGCATGTACAGGATTCATT 5790
|| || ||| || | || ||||| |||||||| || ||| || ||| ||| |
Sbjct 2485 CGTCACTTTGATAGGCCGGTTGCGGTCTTTGCGGTAGATGATGCAGGTGCAGCTTTCGTC 2544
Query 5791 GTCCTGCTCAAAGTCCATGCCATCAAACTGCTGGTTTTCATTGATGATGCGGGACCAGCC 5850
|| ||||||||| || || || || |||||| ||| | ||||||||| || ||||||
Sbjct 2545 GTTCTGCTCAAACTCGATACCGTCGAACTGCGGGTGTGAATTGATGATCCGACTCCAGCC 2604
Query 5851 ATCAACGCCCACCACCGGAACGATGCCGTTCTGCTTATCAGGGAAGGCGTAAATTTCTTT 5910
|| |||||||| || || ||||||||||| | ||| || ||||||||||| ||||| ||
Sbjct 2605 GTCCACGCCCACAACGGGCACGATGCCGTTGTTCTTGTCGGGGAAGGCGTAGATTTCCTT 2664
Query 5911 CGTCCACGGATTAAGGCCGTACTGGTTGGCGACGATCAACAATGCGATGAACTGCGCATC 5970
||||| || || || |||||||||||||||| | || || ||| | | |||||| ||
Sbjct 2665 GGTCCAGGGGTTCAGCGCGTACTGGTTGGCGACCACCAGCAGGGCGGTCATCTGCGCGTC 2724
Query 5971 GCTGGCATCGCCTTTAAATGCCGTCTGGC--GAAGAGTGGTGATCAGTTC 6018
||| | | |||||| || |||| |||| ||| ||| |||||| ||
Sbjct 2725 GCTCACCTGGCCTTTGAAGGCCG--TGGCCTTAAGCGTGCCGATCAGGTC 2772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 184938351941160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |