Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq56889 123 2e-23 seq15631 84.2 1e-11 seq8227 82.4 5e-11 >seq56889 Length=12386 Score = 123 bits (136), Expect = 2e-23 Identities = 172/236 (73%), Gaps = 14/236 (6%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| ||||||| ||| | ||||||||| |||||||| || |||||||| || || Sbjct 5603 ACCTCCTCTCAACCGCAGCACAAGATGCAATGTGGACTCTTTCTGGATATTGTAGTCGGA 5662 Query 33202 CAAATTGAGTT-GGTCATC--CAA-TTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257 || | ||| || |||| ||| |||||| ||| ||| || | |||||||||||| | Sbjct 5663 CA----GGGTTCGGCCATCTTCAAGTTGCTTACCAGCAAAAATAAGACGTTGCTGGTCTG 5718 Query 33258 TGGGTATGCCTTCTTTTTCGCTAA---TCGCCTGTTTTACTGTTTGAATCGTGTCGTTGG 33314 ||| ||||| ||||| || || | ||| || || ||| ||| || || ||| Sbjct 5719 GGGGAATGCCCTCTTTGTCCTGAATTTTTGCC---TTGACATTTTCAATTGTATCACTGG 5775 Query 33315 GTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 ||| || || || ||||| || || || || | ||| || || ||||| |||||| Sbjct 5776 GTTCCACTTCAAGTGTTATGGTCTTCCCTGTTAAAGTCTTGACAAAAATCTGCATG 5831 Score = 95.1 bits (104), Expect = 8e-15 Identities = 155/221 (70%), Gaps = 12/221 (5%) Strand=Plus/Plus Query 33135 AATCTTCA--CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATT 33192 ||||| || || |||||||||| ||| ||||| |||||||| || ||||| ||||| || Sbjct 2957 AATCTGCATCCCACCTCTTAACCTCAAAACCAAGTGCAATGTGGATTCTTTCTGTATGTT 3016 Query 33193 GTAATCAGACAAATTGAGTTGG----TCATCCAATTGCTTTCCACTAAATATTAAACGTT 33248 ||| || |||| | ||| | || || || ||||| || ||| || | ||||| Sbjct 3017 GTAGTCTGACA----GTGTTCGGCCATCTTCTAACTGCTTGCCTGCAAAAATAAGACGTT 3072 Query 33249 GCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGT 33308 ||||||| | || || |||||||| || || ||| || | | || |||| Sbjct 3073 GCTGGTCTGGAGGAATACCTTCTTTGTCTTGTATTTTTGCTTTCACGTTCTCGATAGTGT 3132 Query 33309 CGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGA 33349 | |||||| ||| |||| ||||| ||||| || ||||| Sbjct 3133 CACTGGGTTCAACCTCCAAGGTTATGGTTTTGCC--TAAGA 3171 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || ||||| | || |||||| | ||||| || || |||||||| || || || || || Sbjct 6288 CCTCCTCTAAGCCTCAACACAAGGTGCAAGGTAGATTCTTTTTGAATGTTATAGTCTGAA 6347 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 | | | | || || || ||||| ||| ||| || | |||||||||||| | || Sbjct 6348 AGAGTACGACCATCTTCTAACTGCTTACCAGCAAAAATAAGACGTTGCTGGTCGGGTGGA 6407 Query 33263 ATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319 |||||||| || || | | | ||| || || ||| || ||||| | |||| | Sbjct 6408 ATGCCTTCCTTGTCTTGGATCTTTGCC---TTGACATTTTCGATAGTGTCACTTGGTTCA 6464 Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 || || ||||| || ||||| || || | || || |||||||| |||||| Sbjct 6465 ACTTCAAGAGTGATTGTTTTCCCAGTCAATGTCTTGACGAAAATCTGCATG 6515 >seq15631 Length=58196 Score = 84.2 bits (92), Expect = 1e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 33157 CAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTC 33216 ||| |||||||| | ||| ||||| || |||||||||||| ||| | | || Sbjct 19986 CAAAACCAAATGGAGTGTGCTTTCTTTCTGAATATTGTAATCACTCAAGGAACGATCATC 19927 Query 33217 ATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC 33276 |||| |||||| || |||||| || || || || || | ||||| || ||||| || Sbjct 19926 CTCCAGTTGCTTCCCCGCAAATATCAACCGCTGTTGCTCTGGAGGTATCCCCTCTTTATC 19867 Query 33277 GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGT 33336 |||| || ||| || || || || || | || | | |||| | || ||||| Sbjct 19866 CTGAATCTTCTCTTTCACAGTCATTATGGTTTCTGTAGGCTCAGCGTCAATCGTGATCGT 19807 Query 33337 TTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 ||| || || || ||||| || |||| |||||| || Sbjct 19806 TTTGCCTGTCAGCGTTTTCACAAAAAATTGCATCTT 19771 >seq8227 Length=99420 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 ||||||| | | || || ||||| | ||| |||||| || ||||||||||| | Sbjct 17183 CCGCCTCGAATTCTCAGTACTAAATGGAGTGTACTCTCTTTCTGAATATTGTAATCGTTC 17124 Query 33203 AA--ATTGAGTTGGTCATCCAATTGCTT-TCCACTAAATATTAAACGTTGCTGGTCCGTG 33259 || ||||| | | | |||| |||||| ||| | ||| ||||| ||||| || || | Sbjct 17123 AAAGATTGA--TCGCCCTCCAGTTGCTTCTCCGC-AAAGATTAACCGTTGTTGATCTGGA 17067 Query 33260 GGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319 ||||| |||||||| || ||| || ||| || | | || |||| ||| | | Sbjct 17066 GGTATACCTTCTTTGTCTTGAATTTTCTCTTTCACGGACTTTATGATGTCTGCGGGCTCA 17007 Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||| | || |||||||| || || | ||||| || |||| |||||| Sbjct 17006 GCGTCGATCGTGATCGTTTTGCCTGTCAATGTTTTCACAAAAAATTGCAT 16957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318219446821170