Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq56889 123 2e-23
seq15631 84.2 1e-11
seq8227 82.4 5e-11
>seq56889
Length=12386
Score = 123 bits (136), Expect = 2e-23
Identities = 172/236 (73%), Gaps = 14/236 (6%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||| ||||||| ||| | ||||||||| |||||||| || |||||||| || ||
Sbjct 5603 ACCTCCTCTCAACCGCAGCACAAGATGCAATGTGGACTCTTTCTGGATATTGTAGTCGGA 5662
Query 33202 CAAATTGAGTT-GGTCATC--CAA-TTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257
|| | ||| || |||| ||| |||||| ||| ||| || | |||||||||||| |
Sbjct 5663 CA----GGGTTCGGCCATCTTCAAGTTGCTTACCAGCAAAAATAAGACGTTGCTGGTCTG 5718
Query 33258 TGGGTATGCCTTCTTTTTCGCTAA---TCGCCTGTTTTACTGTTTGAATCGTGTCGTTGG 33314
||| ||||| ||||| || || | ||| || || ||| ||| || || |||
Sbjct 5719 GGGGAATGCCCTCTTTGTCCTGAATTTTTGCC---TTGACATTTTCAATTGTATCACTGG 5775
Query 33315 GTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370
||| || || || ||||| || || || || | ||| || || ||||| ||||||
Sbjct 5776 GTTCCACTTCAAGTGTTATGGTCTTCCCTGTTAAAGTCTTGACAAAAATCTGCATG 5831
Score = 95.1 bits (104), Expect = 8e-15
Identities = 155/221 (70%), Gaps = 12/221 (5%)
Strand=Plus/Plus
Query 33135 AATCTTCA--CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATT 33192
||||| || || |||||||||| ||| ||||| |||||||| || ||||| ||||| ||
Sbjct 2957 AATCTGCATCCCACCTCTTAACCTCAAAACCAAGTGCAATGTGGATTCTTTCTGTATGTT 3016
Query 33193 GTAATCAGACAAATTGAGTTGG----TCATCCAATTGCTTTCCACTAAATATTAAACGTT 33248
||| || |||| | ||| | || || || ||||| || ||| || | |||||
Sbjct 3017 GTAGTCTGACA----GTGTTCGGCCATCTTCTAACTGCTTGCCTGCAAAAATAAGACGTT 3072
Query 33249 GCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGT 33308
||||||| | || || |||||||| || || ||| || | | || ||||
Sbjct 3073 GCTGGTCTGGAGGAATACCTTCTTTGTCTTGTATTTTTGCTTTCACGTTCTCGATAGTGT 3132
Query 33309 CGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGA 33349
| |||||| ||| |||| ||||| ||||| || |||||
Sbjct 3133 CACTGGGTTCAACCTCCAAGGTTATGGTTTTGCC--TAAGA 3171
Score = 93.3 bits (102), Expect = 3e-14
Identities = 160/231 (69%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
|| ||||| | || |||||| | ||||| || || |||||||| || || || || ||
Sbjct 6288 CCTCCTCTAAGCCTCAACACAAGGTGCAAGGTAGATTCTTTTTGAATGTTATAGTCTGAA 6347
Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262
| | | | || || || ||||| ||| ||| || | |||||||||||| | ||
Sbjct 6348 AGAGTACGACCATCTTCTAACTGCTTACCAGCAAAAATAAGACGTTGCTGGTCGGGTGGA 6407
Query 33263 ATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319
|||||||| || || | | | ||| || || ||| || ||||| | |||| |
Sbjct 6408 ATGCCTTCCTTGTCTTGGATCTTTGCC---TTGACATTTTCGATAGTGTCACTTGGTTCA 6464
Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370
|| || ||||| || ||||| || || | || || |||||||| ||||||
Sbjct 6465 ACTTCAAGAGTGATTGTTTTCCCAGTCAATGTCTTGACGAAAATCTGCATG 6515
>seq15631
Length=58196
Score = 84.2 bits (92), Expect = 1e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 33157 CAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTC 33216
||| |||||||| | ||| ||||| || |||||||||||| ||| | | ||
Sbjct 19986 CAAAACCAAATGGAGTGTGCTTTCTTTCTGAATATTGTAATCACTCAAGGAACGATCATC 19927
Query 33217 ATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC 33276
|||| |||||| || |||||| || || || || || | ||||| || ||||| ||
Sbjct 19926 CTCCAGTTGCTTCCCCGCAAATATCAACCGCTGTTGCTCTGGAGGTATCCCCTCTTTATC 19867
Query 33277 GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGT 33336
|||| || ||| || || || || || | || | | |||| | || |||||
Sbjct 19866 CTGAATCTTCTCTTTCACAGTCATTATGGTTTCTGTAGGCTCAGCGTCAATCGTGATCGT 19807
Query 33337 TTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372
||| || || || ||||| || |||| |||||| ||
Sbjct 19806 TTTGCCTGTCAGCGTTTTCACAAAAAATTGCATCTT 19771
>seq8227
Length=99420
Score = 82.4 bits (90), Expect = 5e-11
Identities = 159/230 (69%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
||||||| | | || || ||||| | ||| |||||| || ||||||||||| |
Sbjct 17183 CCGCCTCGAATTCTCAGTACTAAATGGAGTGTACTCTCTTTCTGAATATTGTAATCGTTC 17124
Query 33203 AA--ATTGAGTTGGTCATCCAATTGCTT-TCCACTAAATATTAAACGTTGCTGGTCCGTG 33259
|| ||||| | | | |||| |||||| ||| | ||| ||||| ||||| || || |
Sbjct 17123 AAAGATTGA--TCGCCCTCCAGTTGCTTCTCCGC-AAAGATTAACCGTTGTTGATCTGGA 17067
Query 33260 GGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319
||||| |||||||| || ||| || ||| || | | || |||| ||| | |
Sbjct 17066 GGTATACCTTCTTTGTCTTGAATTTTCTCTTTCACGGACTTTATGATGTCTGCGGGCTCA 17007
Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|||| | || |||||||| || || | ||||| || |||| ||||||
Sbjct 17006 GCGTCGATCGTGATCGTTTTGCCTGTCAATGTTTTCACAAAAAATTGCAT 16957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318219446821170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |