Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq56889 95.1 1e-14
seq95420 82.4 6e-11
>seq56889
Length=12386
Score = 95.1 bits (104), Expect = 1e-14
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| ||||||||| ||||| || | ||| |||||||| ||||||||||| || |
Sbjct 2967 CCACCTCTTAACCTCAAAACCAAGTGCAATGTGGATTCTTTCTGTATGTTGTAGTCTGAC 3026
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| ||| |||||| || || ||||| ||| ||||||| | || || || ||
Sbjct 3027 AGTGTTCGGCCATCTTCTAACTGCTTGCCTGCAAAAATAAGACGTTGCTGGTCTGGAGGA 3086
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||||||||| |||||| |||||| | | | || || | |||||
Sbjct 3087 ATACCTTCTTTGTCTTGTATTTTTGCTTTCACGTTCTCGATAGTGTCACTGGGTTCAACC 3146
Query 20162 TCCACGGTAATGGTTTTGCC 20181
|||| ||| |||||||||||
Sbjct 3147 TCCAAGGTTATGGTTTTGCC 3166
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
||||||| |||| || ||| | ||| | ||| || ||||| || || ||||| ||| |
Sbjct 5604 CCTCCTCTCAACCGCAGCACAAGATGCAATGTGGACTCTTTCTGGATATTGTAGTCGGAC 5663
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| ||| |||||| | ||| || || ||| ||||||| | || || || |||
Sbjct 5664 AGGGTTCGGCCATCTTCAAGTTGCTTACCAGCAAAAATAAGACGTTGCTGGTCTGGGGGA 5723
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||| |||||||| ||||||| || || | ||| | ||| | |||||| |
Sbjct 5724 ATGCCCTCTTTGTCCTGAATTTTTGCCTTGACATTTTCAATTGTATCACTGGGTTCCACT 5783
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|| | || ||||| || || || || || ||||||||||| |||||
Sbjct 5784 TCAAGTGTTATGGTCTTCCCTGTTAAAGTCTTGACAAAAATCTGCAT 5830
>seq95420
Length=6446
Score = 82.4 bits (90), Expect = 6e-11
Identities = 151/220 (69%), Gaps = 5/220 (2%)
Strand=Plus/Plus
Query 19994 CTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCA--TAGTTTTAG 20051
||||| || | ||||| || ||||||||| || || ||||||| | || | |||
Sbjct 45 CTCAAAACAAGATGTAAAGTGTTTTCTTTTTGAATATTATAATCGCTTAATTAATATTAT 104
Query 20052 AATCTTCC---AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTT 20108
|||| ||| || |||||||| ||| ||||||| | || |||||| || | ||||
Sbjct 105 AATCATCCTCTAACTGTTTGCCAGCAAAAATAAGTCGTTGCTGATCGGGTGGAATTCCTT 164
Query 20109 CTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGG 20168
||||||| ||| | || || ||| ||| || ||| |||| || | |
Sbjct 165 CTTTGTCTTGAATATATTTTTGCACACTTTCAATAGTATCTGTTGGTTGAACATCGATAG 224
Query 20169 TAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
| || ||||| || ||||| ||||| ||||| | ||||||
Sbjct 225 TGATTGTTTTTCCAGTCAAAGTTTTCACAAATAATTGCAT 264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418852537559865
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |