Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq17656 100 2e-16 seq8227 98.7 8e-16 seq15631 96.9 3e-15 seq22141 95.1 1e-14 seq454 95.1 1e-14 seq1004 91.5 1e-13 seq13072 82.4 6e-11 >seq17656 Length=61091 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582 ||| || |||||||| || ||||| ||||| || ||| || ||||||||||| || Sbjct 9293 ATGGAGGGTGCTCTCTTTCTGAATATTGTAGTCGCTCAACGAGCGATCGTCCTCCAGTTG 9234 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| || | |||| || ||||| ||||| ||| | || ||| || || |||||| Sbjct 9233 CTTTCCCGCAAAAATCAACCGCTGTTGATCTGGCGGTATACCTTCTTTATCTTGAATTTT 9174 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 || || | |||| ||| || || || ||| | |||| || || ||||| || || Sbjct 9173 CTCTTTTACAGACTTTATAGTGTCTGTTAGCTCAGCTTCGATCGTGATCGTTTTGCCTGT 9114 Query 48703 GAGAGTTTTCACAAAAATCTGCATC 48727 | ||||||||||||| |||||| Sbjct 9113 CAATGTTTTCACAAAAAATTGCATC 9089 >seq8227 Length=99420 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 |||||||| ||||| ||||| || ||||| |||||||| ||| | | ||| ||||| Sbjct 17165 ACTAAATGGAGTGTACTCTCTTTCTGAATATTGTAATCGTTCAAAGATTGATCGCCCTCC 17106 Query 48578 AGCTGCTTACCGCCGTAAA--TTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 || ||||| | ||| ||| |||| || || ||||| || | || ||| ||||| Sbjct 17105 AGTTGCTT--CTCCGCAAAGATTAACCGTTGTTGATCTGGAGGTATACCTTCTTTGTCTT 17048 Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 |||||||| || | ||| |||| | || | | ||| | |||| || || |||| Sbjct 17047 GAATTTTCTCTTTCACGGACTTTATGATGTCTGCGGGCTCAGCGTCGATCGTGATCGTTT 16988 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 | || || | ||||||||||||| |||||| Sbjct 16987 TGCCTGTCAATGTTTTCACAAAAAATTGCATC 16956 >seq15631 Length=58196 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG 48571 || || || ||||| |||||||| || || ||||| ||||||||| ||| || || Sbjct 19988 CTCAAAACCAAATGGAGTGTGCTTTCTTTCTGAATATTGTAATCACTCAAGGAACGATCA 19929 Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631 |||||||| ||||| || | | || || ||||| || || || | | || || Sbjct 19928 TCCTCCAGTTGCTTCCCCGCAAATATCAACCGCTGTTGCTCTGGAGGTATCCCCTCTTTA 19869 Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691 ||| ||| |||| || | || | |||||| || |||| ||| | || | || || Sbjct 19868 TCCTGAATCTTCTCTTTCACAGTCATTATGGTTTCTGTAGGCTCAGCGTCAATCGTGATC 19809 Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||||| || || || ||||||||||||| |||||| Sbjct 19808 GTTTTGCCTGTCAGCGTTTTCACAAAAAATTGCATC 19773 >seq22141 Length=76464 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582 ||| ||||||||||| || ||||| ||||| || ||| || ||||||||||| || Sbjct 26734 ATGGAGTGTGCTCTCTTTCTGAATATTGTAGTCGCTCAAAGAACGATCGTCCTCCAGTTG 26675 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| || | | ||||| ||||| ||||| ||| | || ||| || ||| |||||| Sbjct 26674 CTTCCCCGCAAAGATTAACCGCTGTTGATCTGACGGTATACCTTCTTTATCCTGAATTTT 26615 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 || || | ||| ||| || || || ||| | |||| || || ||||| | || Sbjct 26614 CTCTTTCACAGATTTTATAGTGTCTGTCAGCTCAGCGTCGATCGTGATCGTTTTGTCTGT 26555 Query 48703 GAGAGTTTTCACAAAAA 48719 | ||||||||||||| Sbjct 26554 CAACGTTTTCACAAAAA 26538 >seq454 Length=212681 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582 ||| || |||||||| || ||| | |||||||| ||| || ||||||||||| || Sbjct 116508 ATGGAGAGTGCTCTCTTTCTGAGTATTGTAATCGCTCAACGAACGATCGTCCTCCAGTTG 116567 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| || | |||| || ||||| ||||| ||| | | ||| || ||| |||||| Sbjct 116568 CTTTCCCGCAAAAATCAACCGCTGTTGATCTGGCGGTATATCTTCTTTATCCTGAATTTT 116627 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 || || | |||| ||| || || || ||| | || | || || ||||| || || Sbjct 116628 CTCTTTTACAGACTTTATAGTGTCTGTCTGCTCAGCGTCAATCGTGATCGTTTTGCCTGT 116687 Query 48703 GAGAGTTTTCACAAAAATCTGCATC 48727 | ||||||||||||| |||||| Sbjct 116688 CAATGTTTTCACAAAAAATTGCATC 116712 >seq1004 Length=176236 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582 ||| || |||||||| || ||||| ||||| || || || ||||||||||| || Sbjct 108921 ATGGAGGGTGCTCTCTTTCTGAATATTGTAGTCGCTCAGCGAGCGATCGTCCTCCAGTTG 108862 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| || | |||| || ||||| ||||| ||| | || ||| || || |||||| Sbjct 108861 CTTTCCCGCAAAAATCAACCGCTGTTGATCTGGCGGTATACCTTCTTTATCTTGAATTTT 108802 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 || || | |||| ||| || || || || | |||| || || ||||| || || Sbjct 108801 CTCTTTTACAGACTTTATAGTGTCTGTCTGTTCAGCTTCGATCGTGATCGTTTTGCCTGT 108742 Query 48703 GAGAGTTTTCACAAAAATCTGCATC 48727 | ||||||||||||| |||||| Sbjct 108741 CAATGTTTTCACAAAAAATTGCATC 108717 >seq13072 Length=78421 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 || ||||| |||||||| || || ||||| |||||||| ||| || || |||||| Sbjct 53555 ACAAAATGGAGTGTGCTTTCTTTCTGAATATTGTAATCGCTCAAGGAACGATCATCCTCC 53614 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 || ||||| || | | || || ||||| || || ||| | | ||| || ||| | Sbjct 53615 AGTTGCTTCCCCGCAAATATCAACCGCTGTTGCTCTGGCGGTATCCCTTCTTTATCCTGA 53674 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697 || |||| || | || | |||||| | | || ||| | |||| || || |||| Sbjct 53675 ATCTTCTCTTTCACAGTCATTATGGTGTTCGCAGGCTCAGCGTCGATCGTGATCCTTTTC 53734 Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 || || ||||||||||||| |||||| Sbjct 53735 ATTGTCAGCGTTTTCACAAAAAAATGCATC 53764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420513624033665