Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq17656 100 2e-16
seq8227 98.7 8e-16
seq15631 96.9 3e-15
seq22141 95.1 1e-14
seq454 95.1 1e-14
seq1004 91.5 1e-13
seq13072 82.4 6e-11
>seq17656
Length=61091
Score = 100 bits (110), Expect = 2e-16
Identities = 145/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582
||| || |||||||| || ||||| ||||| || ||| || ||||||||||| ||
Sbjct 9293 ATGGAGGGTGCTCTCTTTCTGAATATTGTAGTCGCTCAACGAGCGATCGTCCTCCAGTTG 9234
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| || | |||| || ||||| ||||| ||| | || ||| || || ||||||
Sbjct 9233 CTTTCCCGCAAAAATCAACCGCTGTTGATCTGGCGGTATACCTTCTTTATCTTGAATTTT 9174
Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702
|| || | |||| ||| || || || ||| | |||| || || ||||| || ||
Sbjct 9173 CTCTTTTACAGACTTTATAGTGTCTGTTAGCTCAGCTTCGATCGTGATCGTTTTGCCTGT 9114
Query 48703 GAGAGTTTTCACAAAAATCTGCATC 48727
| ||||||||||||| ||||||
Sbjct 9113 CAATGTTTTCACAAAAAATTGCATC 9089
>seq8227
Length=99420
Score = 98.7 bits (108), Expect = 8e-16
Identities = 150/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577
|||||||| ||||| ||||| || ||||| |||||||| ||| | | ||| |||||
Sbjct 17165 ACTAAATGGAGTGTACTCTCTTTCTGAATATTGTAATCGTTCAAAGATTGATCGCCCTCC 17106
Query 48578 AGCTGCTTACCGCCGTAAA--TTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
|| ||||| | ||| ||| |||| || || ||||| || | || ||| |||||
Sbjct 17105 AGTTGCTT--CTCCGCAAAGATTAACCGTTGTTGATCTGGAGGTATACCTTCTTTGTCTT 17048
Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695
|||||||| || | ||| |||| | || | | ||| | |||| || || ||||
Sbjct 17047 GAATTTTCTCTTTCACGGACTTTATGATGTCTGCGGGCTCAGCGTCGATCGTGATCGTTT 16988
Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
| || || | ||||||||||||| ||||||
Sbjct 16987 TGCCTGTCAATGTTTTCACAAAAAATTGCATC 16956
>seq15631
Length=58196
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG 48571
|| || || ||||| |||||||| || || ||||| ||||||||| ||| || ||
Sbjct 19988 CTCAAAACCAAATGGAGTGTGCTTTCTTTCTGAATATTGTAATCACTCAAGGAACGATCA 19929
Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631
|||||||| ||||| || | | || || ||||| || || || | | || ||
Sbjct 19928 TCCTCCAGTTGCTTCCCCGCAAATATCAACCGCTGTTGCTCTGGAGGTATCCCCTCTTTA 19869
Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691
||| ||| |||| || | || | |||||| || |||| ||| | || | || ||
Sbjct 19868 TCCTGAATCTTCTCTTTCACAGTCATTATGGTTTCTGTAGGCTCAGCGTCAATCGTGATC 19809
Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||||| || || || ||||||||||||| ||||||
Sbjct 19808 GTTTTGCCTGTCAGCGTTTTCACAAAAAATTGCATC 19773
>seq22141
Length=76464
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582
||| ||||||||||| || ||||| ||||| || ||| || ||||||||||| ||
Sbjct 26734 ATGGAGTGTGCTCTCTTTCTGAATATTGTAGTCGCTCAAAGAACGATCGTCCTCCAGTTG 26675
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| || | | ||||| ||||| ||||| ||| | || ||| || ||| ||||||
Sbjct 26674 CTTCCCCGCAAAGATTAACCGCTGTTGATCTGACGGTATACCTTCTTTATCCTGAATTTT 26615
Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702
|| || | ||| ||| || || || ||| | |||| || || ||||| | ||
Sbjct 26614 CTCTTTCACAGATTTTATAGTGTCTGTCAGCTCAGCGTCGATCGTGATCGTTTTGTCTGT 26555
Query 48703 GAGAGTTTTCACAAAAA 48719
| |||||||||||||
Sbjct 26554 CAACGTTTTCACAAAAA 26538
>seq454
Length=212681
Score = 95.1 bits (104), Expect = 1e-14
Identities = 144/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582
||| || |||||||| || ||| | |||||||| ||| || ||||||||||| ||
Sbjct 116508 ATGGAGAGTGCTCTCTTTCTGAGTATTGTAATCGCTCAACGAACGATCGTCCTCCAGTTG 116567
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| || | |||| || ||||| ||||| ||| | | ||| || ||| ||||||
Sbjct 116568 CTTTCCCGCAAAAATCAACCGCTGTTGATCTGGCGGTATATCTTCTTTATCCTGAATTTT 116627
Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702
|| || | |||| ||| || || || ||| | || | || || ||||| || ||
Sbjct 116628 CTCTTTTACAGACTTTATAGTGTCTGTCTGCTCAGCGTCAATCGTGATCGTTTTGCCTGT 116687
Query 48703 GAGAGTTTTCACAAAAATCTGCATC 48727
| ||||||||||||| ||||||
Sbjct 116688 CAATGTTTTCACAAAAAATTGCATC 116712
>seq1004
Length=176236
Score = 91.5 bits (100), Expect = 1e-13
Identities = 143/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582
||| || |||||||| || ||||| ||||| || || || ||||||||||| ||
Sbjct 108921 ATGGAGGGTGCTCTCTTTCTGAATATTGTAGTCGCTCAGCGAGCGATCGTCCTCCAGTTG 108862
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| || | |||| || ||||| ||||| ||| | || ||| || || ||||||
Sbjct 108861 CTTTCCCGCAAAAATCAACCGCTGTTGATCTGGCGGTATACCTTCTTTATCTTGAATTTT 108802
Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702
|| || | |||| ||| || || || || | |||| || || ||||| || ||
Sbjct 108801 CTCTTTTACAGACTTTATAGTGTCTGTCTGTTCAGCTTCGATCGTGATCGTTTTGCCTGT 108742
Query 48703 GAGAGTTTTCACAAAAATCTGCATC 48727
| ||||||||||||| ||||||
Sbjct 108741 CAATGTTTTCACAAAAAATTGCATC 108717
>seq13072
Length=78421
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577
|| ||||| |||||||| || || ||||| |||||||| ||| || || ||||||
Sbjct 53555 ACAAAATGGAGTGTGCTTTCTTTCTGAATATTGTAATCGCTCAAGGAACGATCATCCTCC 53614
Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637
|| ||||| || | | || || ||||| || || ||| | | ||| || ||| |
Sbjct 53615 AGTTGCTTCCCCGCAAATATCAACCGCTGTTGCTCTGGCGGTATCCCTTCTTTATCCTGA 53674
Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697
|| |||| || | || | |||||| | | || ||| | |||| || || ||||
Sbjct 53675 ATCTTCTCTTTCACAGTCATTATGGTGTTCGCAGGCTCAGCGTCGATCGTGATCCTTTTC 53734
Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
|| || ||||||||||||| ||||||
Sbjct 53735 ATTGTCAGCGTTTTCACAAAAAAATGCATC 53764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420513624033665
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |