Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq3127 109 3e-19 seq11779 105 3e-18 seq25600 104 1e-17 seq40866 100 1e-16 seq7567 100 1e-16 seq4698 98.7 5e-16 seq2317 96.9 2e-15 seq18635 91.5 8e-14 seq37084 89.7 3e-13 seq13098 87.8 9e-13 seq95516 82.4 4e-11 >seq3127 Length=144444 Score = 109 bits (120), Expect = 3e-19 Identities = 77/89 (87%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| ||| |||||| || |||||||||| ||||||||||||||||||||| Sbjct 49381 AAAAAAAAAGCAAGCTGGCCCGTGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCAC 49322 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||| ||||| Sbjct 49321 GACGCTCTAACCAACTGAGCTAACGGGCC 49293 >seq11779 Length=76271 Score = 105 bits (116), Expect = 3e-18 Identities = 76/87 (87%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 11444 AAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||| || | |||||| ||| |||||||||| ||||||||||||||||||||||| Sbjct 3748 AAAAAAAAAAGTCTGGCCCGTGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 3807 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||| ||||| Sbjct 3808 CGCTCTAACCAACTGAGCTAACGGGCC 3834 >seq25600 Length=39438 Score = 104 bits (114), Expect = 1e-17 Identities = 74/85 (87%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| ||| |||||| || ||||||||||| ||||||| ||||||||||||||||| Sbjct 39271 AAAAAACAA--TGGCCCGTGGGAGGATCGAACCCACGACCTTTGCGTTATTAGCACGACG 39328 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||| ||||| Sbjct 39329 CTCTAACCAACTGAGCTAACGGGCC 39353 >seq40866 Length=18027 Score = 100 bits (110), Expect = 1e-16 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||| || |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 168 TGGCCCGTGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 109 Query 11516 TGAGCTAATGGGCC 11529 |||||||| ||||| Sbjct 108 TGAGCTAACGGGCC 95 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||| ||||||||||||||| || |||||||||||||| ||| Sbjct 732 GGATCGAACCCACGACCTTCGCATTATTAGCACGACGCACTAACCAACTGAGCTAACGGG 673 Query 11528 CC 11529 || Sbjct 672 CC 671 >seq7567 Length=79236 Score = 100 bits (110), Expect = 1e-16 Identities = 77/91 (85%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 || |||||| ||| |||||| || |||||||||| ||||||||||||||||||| Sbjct 78481 AAAAAAAAAGAAAAGAATGGCCCGTGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGC 78540 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||| |||||||||||||| ||||| Sbjct 78541 ACGACGCTCTAACCAACTGAGCTAACGGGCC 78571 >seq4698 Length=123933 Score = 98.7 bits (108), Expect = 5e-16 Identities = 73/86 (85%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| ||| |||||| || |||| ||||| |||||||||||||||||||||||| Sbjct 54428 AAAAAAAAAAACTGGCCCGTGGGGGGATAGAACCCACGACCTTCGCGTTATTAGCACGAC 54369 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||| ||||||| ||||| Sbjct 54368 GCTCTAACCAACGGAGCTAACGGGCC 54343 >seq2317 Length=141517 Score = 96.9 bits (106), Expect = 2e-15 Identities = 87/107 (81%), Gaps = 6/107 (6%) Strand=Plus/Plus Query 11424 CAGGGAAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGAC 11483 |||||||| | |||| || |||||| | || ||| || | |||||||| |||| Sbjct 25074 CAGGGAAACA-AGAA--AAGAAAAAAC---ACTGCCCCGTGGGGGTATCGAACCCACGAC 25127 Query 11484 CTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct 25128 CTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACGGGCCG 25174 >seq18635 Length=70268 Score = 91.5 bits (100), Expect = 8e-14 Identities = 57/62 (92%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11469 GATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGC 11528 ||||||||| |||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct 10538 GATCGAACCCACGACCTTCCCGTTATTAGCACGACGCTTTAACCAACTGAGCTAATGGGC 10597 Query 11529 CG 11530 || Sbjct 10598 CG 10599 >seq37084 Length=16403 Score = 89.7 bits (98), Expect = 3e-13 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 11469 GATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGC 11528 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || | Sbjct 11991 GATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACGGAC 12050 Query 11529 C 11529 | Sbjct 12051 C 12051 >seq13098 Length=78878 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||||||||||||||||||||||||| |||| ||||| ||| ||| Sbjct 55353 GGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCACCTGAGATAACGGG 55294 Query 11528 CC 11529 || Sbjct 55293 CC 55292 >seq95516 Length=3113 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||| ||||| |||||||||||||||||||||||| |||| |||||||||||||| || Sbjct 3103 GGATTGAACCCGCGACCTTCGCGTTATTAGCACGACACTCTAACCAACTGAGCTAACGGC 3044 Query 11528 CC 11529 || Sbjct 3043 CC 3042 Lambda K H 0.638 0.409 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261033350563540