Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq17209 105 1e-18 seq5220 98.7 2e-16 seq1371 89.7 8e-14 >seq17209 Length=54724 Score = 105 bits (116), Expect = 1e-18 Identities = 135/185 (73%), Gaps = 1/185 (1%) Strand=Plus/Minus Query 16436 AAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGT 16495 || |||||| | | | |||||||||||||||||| || || |||||||| || |||| | Sbjct 27797 AAACGTCATTGTAAAGTTCTTCGAGATAACATCCAGGGTATTACCAAGCCTGCCATCCAT 27738 Query 16496 CGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGT 16555 |||||||||| |||||| ||| ||||| ||||||| | ||||||||| | ||| Sbjct 27737 CGTCTGGCTCACCGTGGTTTTGTCCAGCGTATCTCTGGCCTCATCTATGAAGGTACTCGC 27678 Query 16556 GATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCAC 16615 |||| | || | ||| | ||| |||||| | | ||||| | || ||| |||| Sbjct 27677 AGTGTTCTTAAAGTTTTCTTGGAGAACGTTATTCGT-ATGCTGTAACTTACACCAAGCAT 27619 Query 16616 GCTAA 16620 || || Sbjct 27618 GCCAA 27614 >seq5220 Length=110530 Score = 98.7 bits (108), Expect = 2e-16 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 16490 ATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAG 16549 ||||||||| |||||| |||| ||||||||||||| ||||||| | |||| |||||| Sbjct 110530 ATCCGTCGTTTGGCTCTCCGTGATGGAGTCAAGCGTATCTCTGGCCTCATCTACGAAGAG 110471 Query 16550 ATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACC 16609 | || | ||| || | ||| | ||| |||||| | ||| ||| | || ||| Sbjct 110470 ACACGCGGTGTGCCTAAAGTTTTCTTGGAGAACGTTATTCGTGACGCTGTAACTTACACC 110411 Query 16610 GAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTA 16653 |||||||| || | ||||| ||||| | |||||| |||| || Sbjct 110410 GAGCACGCCAAGAGGAAGACCGTCACTGCTATGGATGTCGTGTA 110367 >seq1371 Length=172647 Score = 89.7 bits (98), Expect = 8e-14 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 ||||| |||||||| || | |||| ||| || ||||||||| ||||| | ||||||||| Sbjct 50064 CGAGACAACATCCAGGGTCTTACCATGCCCGCCATCCGTCGTTTGGCTTGCCGTGGTGGA 50005 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 ||||||| | ||||||| | | |||||||||| Sbjct 50004 GTCAAGCATATCTCTGGCCTCATGTATGAAGAGA 49971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78943846084845