Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq17209 105 1e-18
seq5220 98.7 2e-16
seq1371 89.7 8e-14
>seq17209
Length=54724
Score = 105 bits (116), Expect = 1e-18
Identities = 135/185 (73%), Gaps = 1/185 (1%)
Strand=Plus/Minus
Query 16436 AAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGT 16495
|| |||||| | | | |||||||||||||||||| || || |||||||| || |||| |
Sbjct 27797 AAACGTCATTGTAAAGTTCTTCGAGATAACATCCAGGGTATTACCAAGCCTGCCATCCAT 27738
Query 16496 CGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGT 16555
|||||||||| |||||| ||| ||||| ||||||| | ||||||||| | |||
Sbjct 27737 CGTCTGGCTCACCGTGGTTTTGTCCAGCGTATCTCTGGCCTCATCTATGAAGGTACTCGC 27678
Query 16556 GATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCAC 16615
|||| | || | ||| | ||| |||||| | | ||||| | || ||| ||||
Sbjct 27677 AGTGTTCTTAAAGTTTTCTTGGAGAACGTTATTCGT-ATGCTGTAACTTACACCAAGCAT 27619
Query 16616 GCTAA 16620
|| ||
Sbjct 27618 GCCAA 27614
>seq5220
Length=110530
Score = 98.7 bits (108), Expect = 2e-16
Identities = 120/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 16490 ATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAG 16549
||||||||| |||||| |||| ||||||||||||| ||||||| | |||| ||||||
Sbjct 110530 ATCCGTCGTTTGGCTCTCCGTGATGGAGTCAAGCGTATCTCTGGCCTCATCTACGAAGAG 110471
Query 16550 ATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACC 16609
| || | ||| || | ||| | ||| |||||| | ||| ||| | || |||
Sbjct 110470 ACACGCGGTGTGCCTAAAGTTTTCTTGGAGAACGTTATTCGTGACGCTGTAACTTACACC 110411
Query 16610 GAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTA 16653
|||||||| || | ||||| ||||| | |||||| |||| ||
Sbjct 110410 GAGCACGCCAAGAGGAAGACCGTCACTGCTATGGATGTCGTGTA 110367
>seq1371
Length=172647
Score = 89.7 bits (98), Expect = 8e-14
Identities = 76/94 (81%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516
||||| |||||||| || | |||| ||| || ||||||||| ||||| | |||||||||
Sbjct 50064 CGAGACAACATCCAGGGTCTTACCATGCCCGCCATCCGTCGTTTGGCTTGCCGTGGTGGA 50005
Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
||||||| | ||||||| | | ||||||||||
Sbjct 50004 GTCAAGCATATCTCTGGCCTCATGTATGAAGAGA 49971
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 78943846084845
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |