Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_006658.1
Length=30655
Score E
Sequences producing significant alignments: (Bits) Value
seq123699 89.7 1e-13
seq35759 89.7 1e-13
seq80806 82.4 1e-11
seq13964 82.4 1e-11
>seq123699
Length=2420
Score = 89.7 bits (98), Expect = 1e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 4474 AAAAATAATTATGTTATTCACTATAAAAATTTGAAACAATGTTTAGATTTAGGTTTAGTT 4533
|| ||||| ||| ||||||||||| |||||||| ||||||||| | ||||| |
Sbjct 297 AAGAATAACTATATTATTCACTATCGCAATTTGAAGCAATGTTTAAACTTAGG-GAGGAA 239
Query 4534 CTTAAGAAAA-TACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATATAT 4592
||||||||| | |||| | | | || |||| || ||| | ||| |||||||
Sbjct 238 GTTAAGAAAAGTCCACCGCGCACTTCACTTCAAGCAGGCATCATGGTTAAAACCATATAT 179
Query 4593 CGATAAAAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAA 4652
||| ||||| | |||| || || |||| ||| ||||| |||||| ||
Sbjct 178 AGATTTCAATACTGAGCAAAGAAAGAATGCCAAAAATGGGTTTGAAAAGGACTTTTTCAA 119
Query 4653 ATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAAA 4700
| | ||||||||| | |||| ||| ||||| ||||| ||| | || ||
Sbjct 118 ACTCATGAATAATTCTGTTTATGGGAAGACCATGGAAAATCTCCGGAA 71
>seq35759
Length=24802
Score = 89.7 bits (98), Expect = 1e-13
Identities = 167/243 (69%), Gaps = 3/243 (1%)
Strand=Plus/Minus
Query 4460 CAACTCTGTACGATAAAAATAATTATGTTATTCACTATAAAAATTTGAAACAATGTTTAG 4519
||| |||| | | || ||||| ||| ||||||||||| ||||| || |||||||||
Sbjct 6489 CAAATCTGAATCAGAAGAATAACTATATTATTCACTATCTCAATTTAAAGCAATGTTTAA 6430
Query 4520 ATTTAGG--TTTAGTTCTTAAGAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTG 4577
| ||||| | |||| || ||| | |||| | | || || |||| || ||
Sbjct 6429 ACTTAGGAATGAAGTT-AGAAAAAAGTCCACCGTGCACTTAACTTCAAGCAGGCATCATG 6371
Query 4578 GCTCAAATCATATATCGATAAAAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGa 4637
| | ||| ||||||| ||| ||||| | | |||| || || |||| || ||
Sbjct 6370 GTTAAAACCATATATAGATTTCAATACTGAACAAAGAAAGAATGCCAAAAATGGATTTGA 6311
Query 4638 aaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACG 4697
||| |||||| ||| | ||||||||| | || | ||||||||| ||||| ||| | ||
Sbjct 6310 AAAGGACTTTTTCAAACTCATGAATAATTCTGTATATGGAAAGACTATGGAAAATCTCCG 6251
Query 4698 AAA 4700
||
Sbjct 6250 GAA 6248
>seq80806
Length=6184
Score = 82.4 bits (90), Expect = 1e-11
Identities = 146/206 (71%), Gaps = 8/206 (4%)
Strand=Plus/Minus
Query 4490 TTCACTATAAAAATTTGAAACAATGT-TTAGATTTAGGTTTAGTTCTTAAGAAAATACAC 4548
|||| |||| |||||||| |||||| || || |||| | |||| || ||||| |||
Sbjct 3480 TTCATTATAGGAATTTGAAGCAATGTCTTCGAGAAGGGTTGA-TTCTGAAAAAAATTCAC 3422
Query 4549 CTAGTCTTGAAATTTGAGCAATCAGAC--TGGCTCAAATCATATATCGATAAAAATACCG 4606
||| ||||||||||||| || | ||||| || | |||| ||| || || |
Sbjct 3421 AGAGTTCTGAAATTTGAGCAG--AGTCCTTGGCTAAAGCCCTATACTGATTTGAACACAG 3364
Query 4607 CATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAA-T 4665
|| || ||| || ||| | || ||||| | ||||||||||| ||||||||
Sbjct 3363 CAAAGCGGGCTAAAGCGAATAATCAATTTGAAAAGAGATTTTATAAATTGATGAATAACA 3304
Query 4666 GCGGTTTTTGGAAAGACGATGGAGAA 4691
||| |||||| ||| || ||||||||
Sbjct 3303 GCGTTTTTTGTAAA-ACTATGGAGAA 3279
>seq13964
Length=47905
Score = 82.4 bits (90), Expect = 1e-11
Identities = 163/236 (69%), Gaps = 8/236 (3%)
Strand=Plus/Plus
Query 4459 ACAACTCTGTACGATAAAAATAATTATGTTATTCACTATAAAAATTTGAAACAATGT-TT 4517
|| || ||||| ||||| | ||||||| |||| | || ||| |||| |||||| ||
Sbjct 31049 ACCACACTGTATGATAAGAGAAATTATGACCTTCATTGTAGGAATCTGAAGCAATGTCTT 31108
Query 4518 AGATTTAGGTTTAGTTCTTAAGAAAATACACCTAGTCTTGAAATTTGAGCAATCAGAC-- 4575
|| |||| | || | | ||||| ||| |||| ||||||| ||||| || |
Sbjct 31109 CGAGAAGGGTTGATTT-TGAGAAAAATTCAC--AGTCCTGAAATTCGAGCAG--AGTCCT 31163
Query 4576 TGGCTCAAATCATATATCGATAAAAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTC 4635
||||| || | ||||| ||| || || ||| ||| ||| || ||| | ||
Sbjct 31164 TGGCTAAAGCCTTATATTGATTTGAACACAGCAAAGCGAGCTGAAGCGAATAATAAATTT 31223
Query 4636 GaaaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAA 4691
|||||| || ||||| || |||||||| ||||||||||| || ||||||||
Sbjct 31224 GAAAAAGGATTATATAAGTTGATGAATAACAGCGTTTTTGGAAAAACTATGGAGAA 31279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97807253530410
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |