Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq72566 145 8e-30
seq20458 95.1 1e-14
seq62528 91.5 2e-13
seq50696 86.0 7e-12
>seq72566
Length=7134
Score = 145 bits (160), Expect = 8e-30
Identities = 577/894 (65%), Gaps = 31/894 (3%)
Strand=Plus/Minus
Query 21183 TTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAA--TGATAT 21240
|||| ||||| || || || | ||| || || ||||| || || | ||| || | || |
Sbjct 894 TTTTCTGATATTCGCTCACCCGTTTCTCAAAGAAATTAGTTTTACTTTCTAAACTAAT-T 836
Query 21241 AGATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGA 21300
|| ||||||||| |||||||||||||| || ||||| ||||| | |||| || | |
Sbjct 835 AG-TTCCATAAACTCAAATGGATTTTCTGAGTTAAACATTTTCGTGTAACCGAGCTGCAA 777
Query 21301 TAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGAT 21360
| ||| || || || ||||| || ||||| ||| | || |||||||| ||
Sbjct 776 CAGTAAATGGTCGGCAACGAATTCAATGTATTGTTTCATCAGCGTACTGTTCATACCAAT 717
Query 21361 CAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAG----ACGGCTTCAA 21416
| || || | ||||| | || ||| ||| || | | ||| || ||||| |
Sbjct 716 GAGAGCGACGGGTAAAGCTTCT---AATAAAAATTCTTGT-TCGAGTCCCACAGCTTCGA 661
Query 21417 CAATTATATTTATTATCCTAGATGTA-CTAG---GGGGATACAATAATTGTTTAAACATC 21472
||| |||| | | || | | || | | || | ||| | | || | |
Sbjct 660 CAAAAATATGACGGACGCGGGACGGATCTGGTTTGTGGGTGAGGTAAC-GCGTGAATAGC 602
Query 21473 AAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTT 21532
|| || ||||||| ||||| | ||||| || | ||| || | ||| || || |||
Sbjct 601 AAGCAAGCAAAATTGCAATGTAGGCCTTCGTCTCGACTGATGAGTTCGTTGCTGAACGTT 542
Query 21533 AAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAG 21592
|||||||| | |||||||| || || | |||||| || | ||||| | ||| ||||||
Sbjct 541 AAACCGGGGAGCAATCCTCTTTTCTTGAGCCAAAAAATGGCTGCAAACGATCCCGAAAAG 482
Query 21593 AAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCC 21652
|||| || || || ||| || |||| || ||||||||| | || || | |
Sbjct 481 AAAACACCTTCCACTATAGCGAAAGCAAGCAACCGTTCACCGAGGGGCGACTCGG-AGCG 423
Query 21653 AATATCCATTTTTCTGCCCATTTTGCCTTTTCTTT--AATACAATCAATTGTATCAATAG 21710
||| ||| || ||||| | ||| ||||||| || || | || || || |
Sbjct 422 AAT--CCAATTCAAAGCCCACTCTGC--TTTCTTTCGAACGCAGGGGAACGTTTCGATGG 367
Query 21711 CTTTTAA-AAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTA 21769
| | || ||| || | || | | | ||| || ||| |||
Sbjct 366 CGTCAAACAAGTTG-TATTACTGTTTTGGATCAGTGATGTATGTGTCAATGAGCAAACTG 308
Query 21770 TACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCT 21829
|||||||| ||||| || || || || ||||| ||||| |||||||| |||| || ||
Sbjct 307 TACATTTCTGAATGAATGTTCTCCATGGCTATTTGAAACCCGTAAAAGCATCGCGCTTCG 248
Query 21830 GAACATTGAACCTCG-GAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACT 21888
| ||||| || || ||||| | ||| || |||||||| || || || || ||
Sbjct 247 GGTAGTTGAATTTCTTGACTAAAACGGGCGAGTAAA-TTTTCATTAACGATGCCGTCGCT 189
Query 21889 GGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT---TT 21945
||| || || ||||| || | || | || |||| | |||| |||| || |
Sbjct 188 GGCAGCGAAGAATGCTAAAACATGTGCAATGAAATGTTTCTCGTCGGCTGTCAAGCGCTC 129
Query 21946 TTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAAT 22005
|| ||| ||| |||||||||||| ||||| ||||| || ||||||||| || |
Sbjct 128 TTCCCAGTCTCGTAAATCTTTTGACAAATCAACTTCCTCTACGGTCCAAAAGGACGCGAC 69
Query 22006 AGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAA 22059
|| ||||| || ||| |||||| |||| || ||||| | |||||
Sbjct 68 CGCTTTTTTGTAAGCGTCCCAAATATCAGGATATTGAATGGGAAACAAAACAAA 15
>seq20458
Length=16953
Score = 95.1 bits (104), Expect = 1e-14
Identities = 344/532 (65%), Gaps = 19/532 (4%)
Strand=Plus/Minus
Query 21472 CAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGT 21531
||| || ||||||| |||||| | ||||| || | ||| || | ||| || || ||
Sbjct 12358 CAAGCAAGCAAAATTACAATGTAGGCCTTCGTCTCGACTGATGAGTTCGTTGCTGAACGT 12299
Query 21532 TAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAA 21591
|||||||||| |||||||| || || | |||||| || | ||||| | ||| |||||
Sbjct 12298 CAAACCGGGCAGCAATCCTCTTTTCTTGAGCCAAAAAATGGCTGCAAACGATCCCGAAAA 12239
Query 21592 GAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATC 21651
||||| || || || ||| || |||| || ||||||| | | || || |
Sbjct 12238 GAAAACACCTTCCACTATAGCGAAAGCAAGCAACCGTTCAC-GAGGGGCGACTCGGA--C 12182
Query 21652 CAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTT--AATACAATCAATTGTATCAATA 21709
| | ||||| || || | ||| ||||||| || || | || || ||
Sbjct 12181 CGA-ATCCAATTCAAAGCTC----TGC--TTTCTTTCGAACGCAGGGGAACGTTTCGATG 12129
Query 21710 GCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTA 21769
| | || | | || ||| | | ||| || ||| |||
Sbjct 12128 ACGTCAAACAAGTTATGTTTCTGTTTCGGATCAGTGATGTATGTGTCAATGAGCAAACTG 12069
Query 21770 TACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCT 21829
|||||||| || || || || || || ||||| |||||||||||||| |||| || ||
Sbjct 12068 TACATTTCTGAGTGAATGTTCTCCATGGCTATTTGAAATCCGTAAAAGCATCGCGCTTCG 12009
Query 21830 GAACATTGAACCTC-GGAATAAAATCGT-TGAGCCAAGTTTTCATTTACTATTCCATCAC 21887
| ||||| || || ||||| ||| ||| || ||||| || || || || || |
Sbjct 12008 GGTAGTTGAATTTCTTGACTAAAA-CGTGCGAG-TAAATTTTCGTTGACGATACCGTCGC 11951
Query 21888 TGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAA---TT 21944
||||||| || ||||| || | || | || |||| | || || |||| || |
Sbjct 11950 TGGCGGCGAAGAATGCTAAAACATGTGCAATGAAATGTTTCTCATTGGCTGTCAAGCGCT 11891
Query 21945 TTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996
|| ||| || |||||||||||| ||||| ||||| || ||||||||
Sbjct 11890 CTTCCCAGTCGCGTAAATCTTTTGACAAATCAACTTCCTCTACGGTCCAAAA 11839
>seq62528
Length=8633
Score = 91.5 bits (100), Expect = 2e-13
Identities = 163/235 (69%), Gaps = 5/235 (2%)
Strand=Plus/Minus
Query 21766 ACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGC 21825
||| |||||||| || || || || ||||| ||||| |||||||||||||| |||| ||
Sbjct 1597 ACTGTACATTTCTGAGTGAATGTTCTCTATGGCTATTTGAAATCCGTAAAAGCATCGCGC 1538
Query 21826 CTCTGAACATTGAACCTC-GGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCAT 21884
|| | ||||| || || | ||| ||| || |||||||| || || || |
Sbjct 1537 TTCGGGTAGTTGAATTTCTTGACTGAAACGCGCGAGTGAA-TTTTCATTGACGATACCGT 1479
Query 21885 CACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAA-- 21942
| |||||||| || ||||| || | || | || |||| | || | |||| ||
Sbjct 1478 CGCTGGCGGCGAAGAATGCTAAAACATGTGCAATGAAATGTTTCTCATCGGCTGTCAAGC 1419
Query 21943 -TTTTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996
| || ||| ||| |||||| ||||| ||||| ||||| || ||||||||
Sbjct 1418 GCTCTTCCCAGTCTCGTAAATCGTTTGACAAATCAACTTCCTCTACGGTCCAAAA 1364
>seq50696
Length=13760
Score = 86.0 bits (94), Expect = 7e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 21500 TCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTT 21559
|||||||| ||||| | |||||| ||||| | || ||||| | |||||||| ||
Sbjct 184 TCATCCCTGCTTATAAGCTCATTACTGAATGTCAGGCCTGGCATAAGACCTCTCTTCTTA 125
Query 21560 AACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCA 21619
| ||| ||||| || ||||| | || || || ||||| || ||||| |||||||||||
Sbjct 124 AGCCAGAATATAGAGGCAAAGGAACCAGAGAAAAAAATTCCTTCAACTGCAGCAAATGCT 65
Query 21620 AC 21621
||
Sbjct 64 AC 63
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 530945605894600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |