Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq72566 145 8e-30 seq20458 95.1 1e-14 seq62528 91.5 2e-13 seq50696 86.0 7e-12 >seq72566 Length=7134 Score = 145 bits (160), Expect = 8e-30 Identities = 577/894 (65%), Gaps = 31/894 (3%) Strand=Plus/Minus Query 21183 TTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAA--TGATAT 21240 |||| ||||| || || || | ||| || || ||||| || || | ||| || | || | Sbjct 894 TTTTCTGATATTCGCTCACCCGTTTCTCAAAGAAATTAGTTTTACTTTCTAAACTAAT-T 836 Query 21241 AGATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGA 21300 || ||||||||| |||||||||||||| || ||||| ||||| | |||| || | | Sbjct 835 AG-TTCCATAAACTCAAATGGATTTTCTGAGTTAAACATTTTCGTGTAACCGAGCTGCAA 777 Query 21301 TAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGAT 21360 | ||| || || || ||||| || ||||| ||| | || |||||||| || Sbjct 776 CAGTAAATGGTCGGCAACGAATTCAATGTATTGTTTCATCAGCGTACTGTTCATACCAAT 717 Query 21361 CAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAG----ACGGCTTCAA 21416 | || || | ||||| | || ||| ||| || | | ||| || ||||| | Sbjct 716 GAGAGCGACGGGTAAAGCTTCT---AATAAAAATTCTTGT-TCGAGTCCCACAGCTTCGA 661 Query 21417 CAATTATATTTATTATCCTAGATGTA-CTAG---GGGGATACAATAATTGTTTAAACATC 21472 ||| |||| | | || | | || | | || | ||| | | || | | Sbjct 660 CAAAAATATGACGGACGCGGGACGGATCTGGTTTGTGGGTGAGGTAAC-GCGTGAATAGC 602 Query 21473 AAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTT 21532 || || ||||||| ||||| | ||||| || | ||| || | ||| || || ||| Sbjct 601 AAGCAAGCAAAATTGCAATGTAGGCCTTCGTCTCGACTGATGAGTTCGTTGCTGAACGTT 542 Query 21533 AAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAG 21592 |||||||| | |||||||| || || | |||||| || | ||||| | ||| |||||| Sbjct 541 AAACCGGGGAGCAATCCTCTTTTCTTGAGCCAAAAAATGGCTGCAAACGATCCCGAAAAG 482 Query 21593 AAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCC 21652 |||| || || || ||| || |||| || ||||||||| | || || | | Sbjct 481 AAAACACCTTCCACTATAGCGAAAGCAAGCAACCGTTCACCGAGGGGCGACTCGG-AGCG 423 Query 21653 AATATCCATTTTTCTGCCCATTTTGCCTTTTCTTT--AATACAATCAATTGTATCAATAG 21710 ||| ||| || ||||| | ||| ||||||| || || | || || || | Sbjct 422 AAT--CCAATTCAAAGCCCACTCTGC--TTTCTTTCGAACGCAGGGGAACGTTTCGATGG 367 Query 21711 CTTTTAA-AAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTA 21769 | | || ||| || | || | | | ||| || ||| ||| Sbjct 366 CGTCAAACAAGTTG-TATTACTGTTTTGGATCAGTGATGTATGTGTCAATGAGCAAACTG 308 Query 21770 TACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCT 21829 |||||||| ||||| || || || || ||||| ||||| |||||||| |||| || || Sbjct 307 TACATTTCTGAATGAATGTTCTCCATGGCTATTTGAAACCCGTAAAAGCATCGCGCTTCG 248 Query 21830 GAACATTGAACCTCG-GAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACT 21888 | ||||| || || ||||| | ||| || |||||||| || || || || || Sbjct 247 GGTAGTTGAATTTCTTGACTAAAACGGGCGAGTAAA-TTTTCATTAACGATGCCGTCGCT 189 Query 21889 GGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT---TT 21945 ||| || || ||||| || | || | || |||| | |||| |||| || | Sbjct 188 GGCAGCGAAGAATGCTAAAACATGTGCAATGAAATGTTTCTCGTCGGCTGTCAAGCGCTC 129 Query 21946 TTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAAT 22005 || ||| ||| |||||||||||| ||||| ||||| || ||||||||| || | Sbjct 128 TTCCCAGTCTCGTAAATCTTTTGACAAATCAACTTCCTCTACGGTCCAAAAGGACGCGAC 69 Query 22006 AGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAA 22059 || ||||| || ||| |||||| |||| || ||||| | ||||| Sbjct 68 CGCTTTTTTGTAAGCGTCCCAAATATCAGGATATTGAATGGGAAACAAAACAAA 15 >seq20458 Length=16953 Score = 95.1 bits (104), Expect = 1e-14 Identities = 344/532 (65%), Gaps = 19/532 (4%) Strand=Plus/Minus Query 21472 CAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGT 21531 ||| || ||||||| |||||| | ||||| || | ||| || | ||| || || || Sbjct 12358 CAAGCAAGCAAAATTACAATGTAGGCCTTCGTCTCGACTGATGAGTTCGTTGCTGAACGT 12299 Query 21532 TAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAA 21591 |||||||||| |||||||| || || | |||||| || | ||||| | ||| ||||| Sbjct 12298 CAAACCGGGCAGCAATCCTCTTTTCTTGAGCCAAAAAATGGCTGCAAACGATCCCGAAAA 12239 Query 21592 GAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATC 21651 ||||| || || || ||| || |||| || ||||||| | | || || | Sbjct 12238 GAAAACACCTTCCACTATAGCGAAAGCAAGCAACCGTTCAC-GAGGGGCGACTCGGA--C 12182 Query 21652 CAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTT--AATACAATCAATTGTATCAATA 21709 | | ||||| || || | ||| ||||||| || || | || || || Sbjct 12181 CGA-ATCCAATTCAAAGCTC----TGC--TTTCTTTCGAACGCAGGGGAACGTTTCGATG 12129 Query 21710 GCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTA 21769 | | || | | || ||| | | ||| || ||| ||| Sbjct 12128 ACGTCAAACAAGTTATGTTTCTGTTTCGGATCAGTGATGTATGTGTCAATGAGCAAACTG 12069 Query 21770 TACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCT 21829 |||||||| || || || || || || ||||| |||||||||||||| |||| || || Sbjct 12068 TACATTTCTGAGTGAATGTTCTCCATGGCTATTTGAAATCCGTAAAAGCATCGCGCTTCG 12009 Query 21830 GAACATTGAACCTC-GGAATAAAATCGT-TGAGCCAAGTTTTCATTTACTATTCCATCAC 21887 | ||||| || || ||||| ||| ||| || ||||| || || || || || | Sbjct 12008 GGTAGTTGAATTTCTTGACTAAAA-CGTGCGAG-TAAATTTTCGTTGACGATACCGTCGC 11951 Query 21888 TGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAA---TT 21944 ||||||| || ||||| || | || | || |||| | || || |||| || | Sbjct 11950 TGGCGGCGAAGAATGCTAAAACATGTGCAATGAAATGTTTCTCATTGGCTGTCAAGCGCT 11891 Query 21945 TTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996 || ||| || |||||||||||| ||||| ||||| || |||||||| Sbjct 11890 CTTCCCAGTCGCGTAAATCTTTTGACAAATCAACTTCCTCTACGGTCCAAAA 11839 >seq62528 Length=8633 Score = 91.5 bits (100), Expect = 2e-13 Identities = 163/235 (69%), Gaps = 5/235 (2%) Strand=Plus/Minus Query 21766 ACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGC 21825 ||| |||||||| || || || || ||||| ||||| |||||||||||||| |||| || Sbjct 1597 ACTGTACATTTCTGAGTGAATGTTCTCTATGGCTATTTGAAATCCGTAAAAGCATCGCGC 1538 Query 21826 CTCTGAACATTGAACCTC-GGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCAT 21884 || | ||||| || || | ||| ||| || |||||||| || || || | Sbjct 1537 TTCGGGTAGTTGAATTTCTTGACTGAAACGCGCGAGTGAA-TTTTCATTGACGATACCGT 1479 Query 21885 CACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAA-- 21942 | |||||||| || ||||| || | || | || |||| | || | |||| || Sbjct 1478 CGCTGGCGGCGAAGAATGCTAAAACATGTGCAATGAAATGTTTCTCATCGGCTGTCAAGC 1419 Query 21943 -TTTTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996 | || ||| ||| |||||| ||||| ||||| ||||| || |||||||| Sbjct 1418 GCTCTTCCCAGTCTCGTAAATCGTTTGACAAATCAACTTCCTCTACGGTCCAAAA 1364 >seq50696 Length=13760 Score = 86.0 bits (94), Expect = 7e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 21500 TCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTT 21559 |||||||| ||||| | |||||| ||||| | || ||||| | |||||||| || Sbjct 184 TCATCCCTGCTTATAAGCTCATTACTGAATGTCAGGCCTGGCATAAGACCTCTCTTCTTA 125 Query 21560 AACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCA 21619 | ||| ||||| || ||||| | || || || ||||| || ||||| ||||||||||| Sbjct 124 AGCCAGAATATAGAGGCAAAGGAACCAGAGAAAAAAATTCCTTCAACTGCAGCAAATGCT 65 Query 21620 AC 21621 || Sbjct 64 AC 63 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530945605894600