Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq56889 113 4e-20
seq23149 95.1 1e-14
seq9166 91.5 1e-13
seq95420 89.7 4e-13
>seq56889
Length=12386
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| ||||||||||| || | || || || ||||| || | ||| ||| ||||
Sbjct 5830 ATGCAGATTTTTGTCAAGACTTTAACAGGGAAGACCATAACACTTGAAGTGGAACCCAGT 5771
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
|| || ||| | | || || ||||||| || ||||| ||| | ||| || |||
Sbjct 5770 GATACAATTGAAAATGTCAAGGCAAAAATTCAGGACAAAGAGGGCATTCCCCCAGACCAG 5711
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
||| | ||||||| ||| || || ||| | ||||||| | |||| || |||| || ||
Sbjct 5710 CAACGTCTTATTTTTGCTGGTAAGCAACTTGAAGATGGCCGAACCCTGTCCGACTACAAT 5651
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|| || |||||||| || | ||| | ||| || | ||| |||||||
Sbjct 5650 ATCCAGAAAGAGTCCACATTGCATCTTGTGCTGCGGTTGAGAGGAGG 5604
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| |||||||| || || | || || ||||| || || | ||| || | ||
Sbjct 6058 ATGCAGATTTTTGTTAAGACATTGACTGGGAAAACAATCACTCTTGAAGTTGAACCAAGT 5999
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
|||||| | | | | || || ||| || || |||||||| |||| || |||
Sbjct 5998 GACACTATCGAAAATGTCAAGGCAAAGATCCAAGACAAAGAAGGTATCCCACCAGACCAG 5939
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| | || |||| ||| || || || |||||||||| ||| | | || ||||||
Sbjct 5938 CAGCGTCTGATTTTTGCTGGAAAGCAGTTAGAAGATGGTCGTACCCTTTCGGACTATAAC 5879
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAG 115500
||||||||||| ||||| | ||| | ||||||||
Sbjct 5878 ATTCAAAAAGAATCTACCCTGCATCTTGTGTTGAG 5844
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| ||||| ||||| || | || || ||||| || || | ||| || | ||
Sbjct 6514 ATGCAGATTTTCGTCAAGACATTGACTGGGAAAACAATCACTCTTGAAGTTGAACCAAGT 6455
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
|||||| | | | | || || ||| || || || |||||| | || || |||
Sbjct 6454 GACACTATCGAAAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATTCCACCCGACCAG 6395
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
||| | ||||||| ||| || || || |||||||||| || | | || ||||||
Sbjct 6394 CAACGTCTTATTTTTGCTGGTAAGCAGTTAGAAGATGGTCGTACTCTTTCAGACTATAAC 6335
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||||||||| ||||| | || | |||||||| | |||||||
Sbjct 6334 ATTCAAAAAGAATCTACCTTGCACCTTGTGTTGAGGCTTAGAGGAGG 6288
>seq23149
Length=43904
Score = 95.1 bits (104), Expect = 1e-14
Identities = 158/227 (70%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
|||||| | ||||| ||||| | | |||||||| || || |||| || || |
Sbjct 20063 ATGCAATTATTTGTGAAAACTTTGAATGGAAAAACAATCACTATCGAT-----GTTCAAC 20009
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
| ||| ||| | || ||| || ||||| || |||||||| | || ||||||
Sbjct 20008 CA-ACTATTGAAAGTGTTAAAAAACAAATTCAAGACAAAGAAGGAATTCCACCCGATCAG 19950
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
||| | ||||||| ||| |||||||| || || ||||| | | | |||||||||
Sbjct 19949 CAACGGCTTATTTTTGCTGGCAAACAGTTGGAGGATGATAGGATATTAAGCGATTATAAT 19890
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||||||||| ||| ||||| | || |||||| || |||| ||
Sbjct 19889 ATTCAAAAAGAAAACACTTTACATCTTGTTTTGAGACTGAGAGGTGG 19843
>seq9166
Length=72308
Score = 91.5 bits (100), Expect = 1e-13
Identities = 165/241 (68%), Gaps = 3/241 (1%)
Strand=Plus/Minus
Query 115272 ATAAGAGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCG 115331
|||||| ||| || |||| | ||||| ||||| | | || ||||| ||||| |||
Sbjct 29510 ATAAGATATTGAA---GCAATTATTTGTGAAAACTTTAAGTGGGAAAACAATTACTATCG 29454
Query 115332 AAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCG 115391
| ||| | | ||||| ||| | || ||| || ||||| |||||||||||
Sbjct 29453 ATGTTGAGCCGACAGACACCATTGAAATTGTTAAAAAACAAATTCAAGATAAAGAAGGAA 29394
Query 115392 TCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCA 115451
| || ||| || || ||||||||| ||| |||||||| || |||||| | |
Sbjct 29393 TTCCACCTGAACAACAGCGACTTATTTTTGCCGGCAAACAGTTGGAAGATAATCGGATAT 29334
Query 115452 TGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAG 115511
|| |||||||| ||||||||||| ||| |||| | || ||||| || |||| |
Sbjct 29333 TGAATGATTATAATATTCAAAAAGAAAACACTTTACACCTTGTTCTGAGACTGAGAGGTG 29274
Query 115512 G 115512
|
Sbjct 29273 G 29273
>seq95420
Length=6446
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/232 (69%), Gaps = 5/232 (2%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
|||||| | ||||| ||||| | || |||||||| || || |||| | | |
Sbjct 264 ATGCAATTATTTGTGAAAACTTTGACTGGAAAAACAATCACTATCGATGTTCAACCAACA 205
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
|| ||| ||| | || || || | ||| || |||||||| | || ||||||
Sbjct 204 GATACTATTGAAAGTGTGCAAAAATATATTCAAGACAAAGAAGGAATTCCACCCGATCAG 145
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGC-----CGATT 115460
||| ||||||||| ||| |||||||| ||||| ||||| | | || |||||
Sbjct 144 CAACGACTTATTTTTGCTGGCAAACAGTTAGAGGATGATTATAATATTAATTAAGCGATT 85
Query 115461 ATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||| ||||||||||| ||| ||||| | || |||||| || |||| ||
Sbjct 84 ATAATATTCAAAAAGAAAACACTTTACATCTTGTTTTGAGACTGAGAGGTGG 33
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424599257879800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |