Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq56889 113 4e-20 seq23149 95.1 1e-14 seq9166 91.5 1e-13 seq95420 89.7 4e-13 >seq56889 Length=12386 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||||||||| || | || || || ||||| || | ||| ||| |||| Sbjct 5830 ATGCAGATTTTTGTCAAGACTTTAACAGGGAAGACCATAACACTTGAAGTGGAACCCAGT 5771 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || ||| | | || || ||||||| || ||||| ||| | ||| || ||| Sbjct 5770 GATACAATTGAAAATGTCAAGGCAAAAATTCAGGACAAAGAGGGCATTCCCCCAGACCAG 5711 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||||| ||| || || ||| | ||||||| | |||| || |||| || || Sbjct 5710 CAACGTCTTATTTTTGCTGGTAAGCAACTTGAAGATGGCCGAACCCTGTCCGACTACAAT 5651 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || || |||||||| || | ||| | ||| || | ||| ||||||| Sbjct 5650 ATCCAGAAAGAGTCCACATTGCATCTTGTGCTGCGGTTGAGAGGAGG 5604 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||| || || | || || ||||| || || | ||| || | || Sbjct 6058 ATGCAGATTTTTGTTAAGACATTGACTGGGAAAACAATCACTCTTGAAGTTGAACCAAGT 5999 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 |||||| | | | | || || ||| || || |||||||| |||| || ||| Sbjct 5998 GACACTATCGAAAATGTCAAGGCAAAGATCCAAGACAAAGAAGGTATCCCACCAGACCAG 5939 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | || |||| ||| || || || |||||||||| ||| | | || |||||| Sbjct 5938 CAGCGTCTGATTTTTGCTGGAAAGCAGTTAGAAGATGGTCGTACCCTTTCGGACTATAAC 5879 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAG 115500 ||||||||||| ||||| | ||| | |||||||| Sbjct 5878 ATTCAAAAAGAATCTACCCTGCATCTTGTGTTGAG 5844 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||| ||||| || | || || ||||| || || | ||| || | || Sbjct 6514 ATGCAGATTTTCGTCAAGACATTGACTGGGAAAACAATCACTCTTGAAGTTGAACCAAGT 6455 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 |||||| | | | | || || ||| || || || |||||| | || || ||| Sbjct 6454 GACACTATCGAAAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATTCCACCCGACCAG 6395 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||||| ||| || || || |||||||||| || | | || |||||| Sbjct 6394 CAACGTCTTATTTTTGCTGGTAAGCAGTTAGAAGATGGTCGTACTCTTTCAGACTATAAC 6335 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||| ||||| | || | |||||||| | ||||||| Sbjct 6334 ATTCAAAAAGAATCTACCTTGCACCTTGTGTTGAGGCTTAGAGGAGG 6288 >seq23149 Length=43904 Score = 95.1 bits (104), Expect = 1e-14 Identities = 158/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||| | ||||| ||||| | | |||||||| || || |||| || || | Sbjct 20063 ATGCAATTATTTGTGAAAACTTTGAATGGAAAAACAATCACTATCGAT-----GTTCAAC 20009 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 | ||| ||| | || ||| || ||||| || |||||||| | || |||||| Sbjct 20008 CA-ACTATTGAAAGTGTTAAAAAACAAATTCAAGACAAAGAAGGAATTCCACCCGATCAG 19950 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||||| ||| |||||||| || || ||||| | | | ||||||||| Sbjct 19949 CAACGGCTTATTTTTGCTGGCAAACAGTTGGAGGATGATAGGATATTAAGCGATTATAAT 19890 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||| ||| ||||| | || |||||| || |||| || Sbjct 19889 ATTCAAAAAGAAAACACTTTACATCTTGTTTTGAGACTGAGAGGTGG 19843 >seq9166 Length=72308 Score = 91.5 bits (100), Expect = 1e-13 Identities = 165/241 (68%), Gaps = 3/241 (1%) Strand=Plus/Minus Query 115272 ATAAGAGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCG 115331 |||||| ||| || |||| | ||||| ||||| | | || ||||| ||||| ||| Sbjct 29510 ATAAGATATTGAA---GCAATTATTTGTGAAAACTTTAAGTGGGAAAACAATTACTATCG 29454 Query 115332 AAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCG 115391 | ||| | | ||||| ||| | || ||| || ||||| ||||||||||| Sbjct 29453 ATGTTGAGCCGACAGACACCATTGAAATTGTTAAAAAACAAATTCAAGATAAAGAAGGAA 29394 Query 115392 TCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCA 115451 | || ||| || || ||||||||| ||| |||||||| || |||||| | | Sbjct 29393 TTCCACCTGAACAACAGCGACTTATTTTTGCCGGCAAACAGTTGGAAGATAATCGGATAT 29334 Query 115452 TGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAG 115511 || |||||||| ||||||||||| ||| |||| | || ||||| || |||| | Sbjct 29333 TGAATGATTATAATATTCAAAAAGAAAACACTTTACACCTTGTTCTGAGACTGAGAGGTG 29274 Query 115512 G 115512 | Sbjct 29273 G 29273 >seq95420 Length=6446 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/232 (69%), Gaps = 5/232 (2%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||| | ||||| ||||| | || |||||||| || || |||| | | | Sbjct 264 ATGCAATTATTTGTGAAAACTTTGACTGGAAAAACAATCACTATCGATGTTCAACCAACA 205 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| ||| | || || || | ||| || |||||||| | || |||||| Sbjct 204 GATACTATTGAAAGTGTGCAAAAATATATTCAAGACAAAGAAGGAATTCCACCCGATCAG 145 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGC-----CGATT 115460 ||| ||||||||| ||| |||||||| ||||| ||||| | | || ||||| Sbjct 144 CAACGACTTATTTTTGCTGGCAAACAGTTAGAGGATGATTATAATATTAATTAAGCGATT 85 Query 115461 ATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||| ||||||||||| ||| ||||| | || |||||| || |||| || Sbjct 84 ATAATATTCAAAAAGAAAACACTTTACATCTTGTTTTGAGACTGAGAGGTGG 33 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424599257879800