Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq56889 107 2e-18 >seq56889 Length=12386 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| | || ||| || | ||||| |||||||| || || || |||||||||| | Sbjct 5604 CCTCCTCTCAACCGCAGCACAAGATGCAATGTGGACTCTTTCTGGATATTGTAGTCGGAC 5663 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | | || || | ||| || || ||| ||||||| || || ||||| || Sbjct 5664 AGGGTTCGGCCATCTTCAAGTTGCTTACCAGCAAAAATAAGACGTTGCTGGTCTGGGGGA 5723 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||||||||| ||||| ||| || | | | || || | ||| ||| | Sbjct 5724 ATGCCCTCTTTGTCCTGAATTTTTGCCTTGACATTTTCAATTGTATCACTGGGTTCCACT 5783 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | || ||||| || || || | || ||||||||||||||||| Sbjct 5784 TCAAGTGTTATGGTCTTCCCTGTTAAAGTCTTGACAAAAATCTGCAT 5830 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| |||| || ||||| |||| |||| ||||| || || |||||||||||||| | Sbjct 2966 CCCACCTCTTAACCTCAAAACCAAGTGCAATGTGGATTCTTTCTGTATGTTGTAGTCTGA 3025 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || ||| | | || || || || ||||| ||| ||||||| || || ||||| ||| Sbjct 3026 CAGTGTTCGGCCATCTTCTAACTGCTTGCCTGCAAAAATAAGACGTTGCTGGTCTGGAGG 3085 Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGC-TTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || |||||||| |||| ||| ||||| | | | |||||| | ||| || Sbjct 3086 AATACCTTCTTTGTCTTGTATTT-TTGCTTTCACGTTCTCGATAGTGTCACTGGGTTCAA 3144 Query 16887 TTTCCACGGTGATGGTTTTTCC 16908 |||| ||| |||||||| || Sbjct 3145 CCTCCAAGGTTATGGTTTTGCC 3166 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| ||||||| || | |||||| || || || ||||| ||||| ||||| | Sbjct 5832 CCGCCTCTAAGCCTCAACACAAGATGCAGGGTAGATTCTTTTTGAATGTTATAGTCCGAA 5891 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | || || || || || || ||| |||| || ||||| ||||| || Sbjct 5892 AGGGTACGACCATCTTCTAACTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGG 5951 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || |||||||| || ||||| ||| || | | | |||||| | || || Sbjct 5952 ATACCTTCTTTGTCTTGGATCTTTGC--CTTGACATTTTCGATAGTGTCACTTGGTTCAA 6009 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | ||||| ||||| || |||| || || |||||||||||||| Sbjct 6010 CTTCAAGAGTGATTGTTTTCCCAGTCAATGTCTTAACAAAAATCTGCAT 6058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404378724458350