Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_008520.2
Length=132239
Score E
Sequences producing significant alignments: (Bits) Value
seq56889 104 2e-17
seq23149 96.9 3e-15
seq95420 95.1 1e-14
seq8227 82.4 6e-11
>seq56889
Length=12386
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||| ||||||||||| || | || || || ||||| || | ||| |||||||||
Sbjct 5830 ATGCAGATTTTTGTCAAGACTTTAACAGGGAAGACCATAACACTTGAAGTGGAACCCAGT 5771
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
||| | ||| | || || ||||||| |||||||| ||| ||||| || ||
Sbjct 5770 GATACAATTGAAAATGTCAAGGCAAAAATTCAGGACAAAGAGGGCATTCCCCCAGACCAG 5711
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
||| | ||||||| ||| || || ||| | |||||| ||| || |||| || |||
Sbjct 5710 CAACGTCTTATTTTTGCTGGTAAGCAACTTGAAGATGGCCGAACCCTGTCCGACTACAAT 5651
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCG 111401
|| || ||||| || ||| | ||| | ||| ||||
Sbjct 5650 ATCCAGAAAGAGTCCACATTGCATCTTGTGCTGCG 5616
Score = 84.2 bits (92), Expect = 2e-11
Identities = 130/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 111214 GGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAA 111273
||||||||||| ||| |||| |||||||| || || | | | || ||| ||||
Sbjct 3166 GGCAAAACCATAACCTTGGAGGTTGAACCCAGTGACACTATCGAGAACGTGAAAGCAAAA 3107
Query 111274 ATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAA 111333
|| ||||||||||| |||| || || ||| | ||||||| ||| ||||| ||
Sbjct 3106 ATACAAGACAAAGAAGGTATTCCTCCAGACCAGCAACGTCTTATTTTTGCAGGCAAGCAG 3047
Query 111334 TTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTA 111393
|| |||||| ||| || | || || || ||||| |||||||| ||| | || ||
Sbjct 3046 TTAGAAGATGGCCGAACACTGTCAGACTACAACATACAGAAAGAATCCACATTGCACTTG 2987
Query 111394 GTGTTG 111399
|| |||
Sbjct 2986 GTTTTG 2981
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||| || ||||| || || | || ||||| ||||| || | ||| |||||||||
Sbjct 6286 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACACTTGAAGTGGAACCCAGT 6227
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| | ||| | ||||| |||||| ||||||||||| | || || ||
Sbjct 6226 GACACCATTGAAAACGTAAAGGCAAAAATCCAAGACAAAGAAGGTATCCCACCAGACCAG 6167
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
|| | | |||| ||| |||||||| |||||||| || | | ||||| ||
Sbjct 6166 CAGCGTTTAATTTTTGCTGGCAAACAGCTGGAAGATGGCCGCACGCTTTCAGATTACAAC 6107
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415
|| || ||||||||||| |||||| | || ||||| || | || ||||
Sbjct 6106 ATCCAGAAAGAATCTACCCTACATCTGGTCTTGCGACTCAGGGGAGGCA 6058
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||| ||||| ||||| || |||| || ||||| || || | ||| ||||| ||
Sbjct 6514 ATGCAGATTTTCGTCAAGACATTGACTGGGAAAACAATCACTCTTGAAGTTGAACCAAGT 6455
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| || | | | || || ||| || ||||| |||||| |||| ||| ||
Sbjct 6454 GACACTATCGAAAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATTCCACCCGACCAG 6395
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
||| | ||||||| ||| || || || || |||||| | ||| | | || |||||
Sbjct 6394 CAACGTCTTATTTTTGCTGGTAAGCAGTTAGAAGATGGTCGTACTCTTTCAGACTATAAC 6335
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415
|| |||||||||||||| | || | |||||| | || | || ||||
Sbjct 6334 ATTCAAAAAGAATCTACCTTGCACCTTGTGTTGAGGCTTAGAGGAGGCA 6286
>seq23149
Length=43904
Score = 96.9 bits (106), Expect = 3e-15
Identities = 115/154 (75%), Gaps = 4/154 (3%)
Strand=Plus/Minus
Query 111262 GTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTAT 111321
|| ||| || ||||| ||||||||||| |||| |||||| ||| ||||||||| |
Sbjct 19994 GTTAAAAAACAAATTCAAGACAAAGAAGGAATTCCACCCGATCAGCAACGGCTTATTTTT 19935
Query 111322 GCGGGCAAACAATTGGAAGATTCTA--AAACTATGGCCGATTATAATATACAAAAAGAAT 111379
|| |||||||| ||||| ||| || | | || | |||||||||||| |||||||||
Sbjct 19934 GCTGGCAAACAGTTGGAGGATGATAGGATATTAAG--CGATTATAATATTCAAAAAGAAA 19877
Query 111380 CTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|| ||||| | || ||| | ||| | |||||
Sbjct 19876 ACACTTTACATCTTGTTTTGAGACTGAGAGGTGG 19843
>seq95420
Length=6446
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/232 (69%), Gaps = 5/232 (2%)
Strand=Plus/Minus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
|||||| | ||||| ||||| |||| || ||||| || || | || |||| |
Sbjct 264 ATGCAATTATTTGTGAAAACTTTGACTGGAAAAACAATCACTATCGATGTTCAACCAACA 205
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
||| || ||| || || || | ||| ||||||||||| |||| ||||||
Sbjct 204 GATACTATTGAAAGTGTGCAAAAATATATTCAAGACAAAGAAGGAATTCCACCCGATCAG 145
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATT---GGAAGATTCTAAAACTA--TGGCCGATT 111361
||| | ||||||| ||| |||||||| || ||| |||| ||| | || | |||||
Sbjct 144 CAACGACTTATTTTTGCTGGCAAACAGTTAGAGGATGATTATAATATTAATTAAGCGATT 85
Query 111362 ATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
||||||| ||||||||| || ||||| | || ||| | ||| | |||||
Sbjct 84 ATAATATTCAAAAAGAAAACACTTTACATCTTGTTTTGAGACTGAGAGGTGG 33
>seq8227
Length=99420
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/211 (69%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCC--A 111244
|||||| ||||||| ||||| |||| |||||||| || || | || | || ||| |
Sbjct 16957 ATGCAATTTTTTGTGAAAACATTGACAGGCAAAACGATCACGATCGACGCTGAGCCCGCA 17016
Query 111245 GCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATC 111304
| || | | || || ||| | |||||| ||||||||||| | || ||||
Sbjct 17017 GACATCATAAAGTCC--GTGAAAGAGAAAATTCAAGACAAAGAAGGTATACCTCCAGATC 17074
Query 111305 AACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 111364
||||| || | || | ||||| || ||| |||| | | || || || |||||| |
Sbjct 17075 AACAACGGTTAATCTTTGCGGAGAAGCAACTGGAGGGCGATCAATCTTTGAACGATTACA 17134
Query 111365 ATATACAAAAAGAATCTACACTACATTTAGT 111395
|||| || ||||| |||||| ||||||||
Sbjct 17135 ATATTCAGAAAGAGAGTACACTCCATTTAGT 17165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422299291993000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |