Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq56889 104 2e-17 seq23149 96.9 3e-15 seq95420 95.1 1e-14 seq8227 82.4 6e-11 >seq56889 Length=12386 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| ||||||||||| || | || || || ||||| || | ||| ||||||||| Sbjct 5830 ATGCAGATTTTTGTCAAGACTTTAACAGGGAAGACCATAACACTTGAAGTGGAACCCAGT 5771 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | || || ||||||| |||||||| ||| ||||| || || Sbjct 5770 GATACAATTGAAAATGTCAAGGCAAAAATTCAGGACAAAGAGGGCATTCCCCCAGACCAG 5711 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | ||||||| ||| || || ||| | |||||| ||| || |||| || ||| Sbjct 5710 CAACGTCTTATTTTTGCTGGTAAGCAACTTGAAGATGGCCGAACCCTGTCCGACTACAAT 5651 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCG 111401 || || ||||| || ||| | ||| | ||| |||| Sbjct 5650 ATCCAGAAAGAGTCCACATTGCATCTTGTGCTGCG 5616 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 111214 GGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAA 111273 ||||||||||| ||| |||| |||||||| || || | | | || ||| |||| Sbjct 3166 GGCAAAACCATAACCTTGGAGGTTGAACCCAGTGACACTATCGAGAACGTGAAAGCAAAA 3107 Query 111274 ATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAA 111333 || ||||||||||| |||| || || ||| | ||||||| ||| ||||| || Sbjct 3106 ATACAAGACAAAGAAGGTATTCCTCCAGACCAGCAACGTCTTATTTTTGCAGGCAAGCAG 3047 Query 111334 TTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTA 111393 || |||||| ||| || | || || || ||||| |||||||| ||| | || || Sbjct 3046 TTAGAAGATGGCCGAACACTGTCAGACTACAACATACAGAAAGAATCCACATTGCACTTG 2987 Query 111394 GTGTTG 111399 || ||| Sbjct 2986 GTTTTG 2981 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || ||||| || || | || ||||| ||||| || | ||| ||||||||| Sbjct 6286 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACACTTGAAGTGGAACCCAGT 6227 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | ||||| |||||| ||||||||||| | || || || Sbjct 6226 GACACCATTGAAAACGTAAAGGCAAAAATCCAAGACAAAGAAGGTATCCCACCAGACCAG 6167 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || | | |||| ||| |||||||| |||||||| || | | ||||| || Sbjct 6166 CAGCGTTTAATTTTTGCTGGCAAACAGCTGGAAGATGGCCGCACGCTTTCAGATTACAAC 6107 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 || || ||||||||||| |||||| | || ||||| || | || |||| Sbjct 6106 ATCCAGAAAGAATCTACCCTACATCTGGTCTTGCGACTCAGGGGAGGCA 6058 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| ||||| ||||| || |||| || ||||| || || | ||| ||||| || Sbjct 6514 ATGCAGATTTTCGTCAAGACATTGACTGGGAAAACAATCACTCTTGAAGTTGAACCAAGT 6455 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || || | | | || || ||| || ||||| |||||| |||| ||| || Sbjct 6454 GACACTATCGAAAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATTCCACCCGACCAG 6395 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | ||||||| ||| || || || || |||||| | ||| | | || ||||| Sbjct 6394 CAACGTCTTATTTTTGCTGGTAAGCAGTTAGAAGATGGTCGTACTCTTTCAGACTATAAC 6335 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 || |||||||||||||| | || | |||||| | || | || |||| Sbjct 6334 ATTCAAAAAGAATCTACCTTGCACCTTGTGTTGAGGCTTAGAGGAGGCA 6286 >seq23149 Length=43904 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/154 (75%), Gaps = 4/154 (3%) Strand=Plus/Minus Query 111262 GTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTAT 111321 || ||| || ||||| ||||||||||| |||| |||||| ||| ||||||||| | Sbjct 19994 GTTAAAAAACAAATTCAAGACAAAGAAGGAATTCCACCCGATCAGCAACGGCTTATTTTT 19935 Query 111322 GCGGGCAAACAATTGGAAGATTCTA--AAACTATGGCCGATTATAATATACAAAAAGAAT 111379 || |||||||| ||||| ||| || | | || | |||||||||||| ||||||||| Sbjct 19934 GCTGGCAAACAGTTGGAGGATGATAGGATATTAAG--CGATTATAATATTCAAAAAGAAA 19877 Query 111380 CTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||| | || ||| | ||| | ||||| Sbjct 19876 ACACTTTACATCTTGTTTTGAGACTGAGAGGTGG 19843 >seq95420 Length=6446 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/232 (69%), Gaps = 5/232 (2%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||| | ||||| ||||| |||| || ||||| || || | || |||| | Sbjct 264 ATGCAATTATTTGTGAAAACTTTGACTGGAAAAACAATCACTATCGATGTTCAACCAACA 205 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| || ||| || || || | ||| ||||||||||| |||| |||||| Sbjct 204 GATACTATTGAAAGTGTGCAAAAATATATTCAAGACAAAGAAGGAATTCCACCCGATCAG 145 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATT---GGAAGATTCTAAAACTA--TGGCCGATT 111361 ||| | ||||||| ||| |||||||| || ||| |||| ||| | || | ||||| Sbjct 144 CAACGACTTATTTTTGCTGGCAAACAGTTAGAGGATGATTATAATATTAATTAAGCGATT 85 Query 111362 ATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||||||| ||||||||| || ||||| | || ||| | ||| | ||||| Sbjct 84 ATAATATTCAAAAAGAAAACACTTTACATCTTGTTTTGAGACTGAGAGGTGG 33 >seq8227 Length=99420 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCC--A 111244 |||||| ||||||| ||||| |||| |||||||| || || | || | || ||| | Sbjct 16957 ATGCAATTTTTTGTGAAAACATTGACAGGCAAAACGATCACGATCGACGCTGAGCCCGCA 17016 Query 111245 GCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATC 111304 | || | | || || ||| | |||||| ||||||||||| | || |||| Sbjct 17017 GACATCATAAAGTCC--GTGAAAGAGAAAATTCAAGACAAAGAAGGTATACCTCCAGATC 17074 Query 111305 AACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 111364 ||||| || | || | ||||| || ||| |||| | | || || || |||||| | Sbjct 17075 AACAACGGTTAATCTTTGCGGAGAAGCAACTGGAGGGCGATCAATCTTTGAACGATTACA 17134 Query 111365 ATATACAAAAAGAATCTACACTACATTTAGT 111395 |||| || ||||| |||||| |||||||| Sbjct 17135 ATATTCAGAAAGAGAGTACACTCCATTTAGT 17165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422299291993000