Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq454 136 3e-27 seq19790 96.9 3e-15 >seq454 Length=212681 Score = 136 bits (150), Expect = 3e-27 Identities = 274/403 (68%), Gaps = 10/403 (2%) Strand=Plus/Minus Query 20192 TAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGA 20251 || ||||| ||||| || || ||||| | ||| || || ||| | || |||| ||||| Sbjct 93009 TATATGTGAGCATCCCCTAATGTGTGGACAAAATCTCCAGGTTTGAGGTCAGTGACATGT 92950 Query 20252 GCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATG 20311 || | ||| | || || |||| |||||| ||||||||||| || || || |||||||| Sbjct 92949 GCGATCATGTGTGTCAAAAGGGCATAGCTAGCAATGTTAAATGGTACACCTAAACCCATA 92890 Query 20312 TCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACAT 20371 || || ||||| || |||| ||||| || || || || | | |||||||| || | Sbjct 92889 TCGCCAGACCTTTGGTACAATTGACATGATAGTTCGCCATTACTCACATAAAACTGGGCT 92830 Query 20372 AACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATA 20431 || ||||||| || || || |||| | | || | |||||| | ||||| | Sbjct 92829 AAACAGTGACAAGGGGGGAGAACCATTTTGGGTATATCAAGTGCGTTCCAAGAACACAAA 92770 Query 20432 ATGATTCTTCTATCGTGCGGATTATTTTTTAT----TAAATCCACAATGTACGACAATTG 20487 || ||||||| ||| | ||||| | || || | ||| |||| | | ||| || Sbjct 92769 ATTATTCTTCGATCATTAGGATTTTCCTTGATGGCCTTAAT-CACA---TTTGCCAACTG 92714 Query 20488 GTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCT 20547 |||| || || ||||| ||||| || | | | ||| |||||||| || | Sbjct 92713 ATCAACTCCTTGACCTGTGTAGTCTGCTTTCATATGAGAATACTGAGCCCCAAAATGTCG 92654 Query 20548 CCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTG 20590 |||||| || || || || || || | ||| || | |||||| Sbjct 92653 CCACTGAAACCCATACACTGGACCTAGATCACCTT--CTTCTG 92613 >seq19790 Length=54031 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 20192 TAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGA 20251 || ||||| |||||||| | || || | ||| || || ||| | || ||| ||||| Sbjct 16783 TATATGTGAGCATCTCCTATTGTATGGACAAAATCTCCAGGTTTGAGGTTAGTGACATGT 16724 Query 20252 GCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATG 20311 || | ||| | || || |||| |||||| ||||||||||| || || || ||||||| Sbjct 16723 GCGATCATGTGTGTCAAAAGGGCATAGCTAGCAATGTTAAATGGCACACCTCAACCCATA 16664 Query 20312 TCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACAT 20371 || | |||| | |||| ||||| || || || |||| | |||||||| || | Sbjct 16663 TCAGCATACCTTAGGTACATTTGACATGATAGTTCGCCGTTACTCACATAAAACTGGGCT 16604 Query 20372 AACAAGTGACAGGGCGGAAGCGCCAT 20397 || ||| || || ||||| ||||| Sbjct 16603 AAACAGTTACTAGGTGGAAGAGCCAT 16578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440580177208600