Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq454 136 3e-27
seq19790 96.9 3e-15
>seq454
Length=212681
Score = 136 bits (150), Expect = 3e-27
Identities = 274/403 (68%), Gaps = 10/403 (2%)
Strand=Plus/Minus
Query 20192 TAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGA 20251
|| ||||| ||||| || || ||||| | ||| || || ||| | || |||| |||||
Sbjct 93009 TATATGTGAGCATCCCCTAATGTGTGGACAAAATCTCCAGGTTTGAGGTCAGTGACATGT 92950
Query 20252 GCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATG 20311
|| | ||| | || || |||| |||||| ||||||||||| || || || ||||||||
Sbjct 92949 GCGATCATGTGTGTCAAAAGGGCATAGCTAGCAATGTTAAATGGTACACCTAAACCCATA 92890
Query 20312 TCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACAT 20371
|| || ||||| || |||| ||||| || || || || | | |||||||| || |
Sbjct 92889 TCGCCAGACCTTTGGTACAATTGACATGATAGTTCGCCATTACTCACATAAAACTGGGCT 92830
Query 20372 AACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATA 20431
|| ||||||| || || || |||| | | || | |||||| | ||||| |
Sbjct 92829 AAACAGTGACAAGGGGGGAGAACCATTTTGGGTATATCAAGTGCGTTCCAAGAACACAAA 92770
Query 20432 ATGATTCTTCTATCGTGCGGATTATTTTTTAT----TAAATCCACAATGTACGACAATTG 20487
|| ||||||| ||| | ||||| | || || | ||| |||| | | ||| ||
Sbjct 92769 ATTATTCTTCGATCATTAGGATTTTCCTTGATGGCCTTAAT-CACA---TTTGCCAACTG 92714
Query 20488 GTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCT 20547
|||| || || ||||| ||||| || | | | ||| |||||||| || |
Sbjct 92713 ATCAACTCCTTGACCTGTGTAGTCTGCTTTCATATGAGAATACTGAGCCCCAAAATGTCG 92654
Query 20548 CCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTG 20590
|||||| || || || || || || | ||| || | ||||||
Sbjct 92653 CCACTGAAACCCATACACTGGACCTAGATCACCTT--CTTCTG 92613
>seq19790
Length=54031
Score = 96.9 bits (106), Expect = 3e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 20192 TAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGA 20251
|| ||||| |||||||| | || || | ||| || || ||| | || ||| |||||
Sbjct 16783 TATATGTGAGCATCTCCTATTGTATGGACAAAATCTCCAGGTTTGAGGTTAGTGACATGT 16724
Query 20252 GCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATG 20311
|| | ||| | || || |||| |||||| ||||||||||| || || || |||||||
Sbjct 16723 GCGATCATGTGTGTCAAAAGGGCATAGCTAGCAATGTTAAATGGCACACCTCAACCCATA 16664
Query 20312 TCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACAT 20371
|| | |||| | |||| ||||| || || || |||| | |||||||| || |
Sbjct 16663 TCAGCATACCTTAGGTACATTTGACATGATAGTTCGCCGTTACTCACATAAAACTGGGCT 16604
Query 20372 AACAAGTGACAGGGCGGAAGCGCCAT 20397
|| ||| || || ||||| |||||
Sbjct 16603 AAACAGTTACTAGGTGGAAGAGCCAT 16578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 440580177208600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |