Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq17656 111 1e-19 seq1004 107 2e-18 seq4135 100 2e-16 seq128145 96.9 3e-15 seq454 95.1 1e-14 seq22141 91.5 1e-13 seq3578 91.5 1e-13 seq56889 89.7 4e-13 seq23609 82.4 6e-11 seq15631 82.4 6e-11 >seq17656 Length=61091 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||| |||||||| || ||||| || |||||||| |||||||| ||||| || | Sbjct 9316 CCGCCTCGAAGCCGCAGGACGAGATGGAGGGTGCTCTCTTTCTGAATATTGTAGTCGCTC 9257 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 || || ||||| |||| |||||| || ||||| |||| ||||| ||||| ||| Sbjct 9256 AACGAGCGATCGTCCTCCAGTTGCTTTCCCGCAAAAATCAACCGCTGTTGATCTGGCGGT 9197 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGT-AGATTCGCA 34079 | | ||||| || |||||| | || | || | | | | || || || | || Sbjct 9196 ATACCTTCTTTATCTTGAATTTTCTCTTTTACAGACTTTATAGTGTCTGTTAGCTCAGC- 9138 Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||||| ||| || ||||| || || | |||||||||||| | |||||| Sbjct 9137 TTCGATCGTGATCGTTTTGCCTGTCAATGTTTTCACAAAAAATTGCAT 9090 >seq1004 Length=176236 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||| |||||||| || ||||| || |||||||| |||||||| ||||| || | Sbjct 108944 CCGCCTCGAAGCCGCAGGACGAGATGGAGGGTGCTCTCTTTCTGAATATTGTAGTCGCTC 108885 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || ||||| |||| |||||| || ||||| |||| ||||| ||||| ||| Sbjct 108884 AGCGAGCGATCGTCCTCCAGTTGCTTTCCCGCAAAAATCAACCGCTGTTGATCTGGCGGT 108825 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCAT 34080 | | ||||| || |||||| | || | || | | | | || || ||| | Sbjct 108824 ATACCTTCTTTATCTTGAATTTTCTCTTTTACAGACTTTATAGTGTCTGTCTGTTCAGCT 108765 Query 34081 TCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 |||| ||| || ||||| || || | |||||||||||| | |||||| Sbjct 108764 TCGATCGTGATCGTTTTGCCTGTCAATGTTTTCACAAAAAATTGCAT 108718 >seq4135 Length=118798 Score = 100 bits (110), Expect = 2e-16 Identities = 82/97 (85%), Gaps = 2/97 (2%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 || ||||| |||||||||||||||| |||||||||||| ||| ||||||||||||| Sbjct 45506 CACGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGTAAGGTACGATCTAAGGAACC 45447 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTA 115625 | ||||||| || ||||||||||| ||| ||| |||| Sbjct 45446 ATAACTGATTTAATGAGCCATTCGCGGTTTCGCCTTA 45410 Score = 100 bits (110), Expect = 2e-16 Identities = 82/97 (85%), Gaps = 2/97 (2%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 || ||||| |||||||||||||||| |||||||||||| ||| ||||||||||||| Sbjct 45506 CACGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGTAAGGTACGATCTAAGGAACC 45447 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTA 114428 | ||||||| || ||||||||||| ||| ||| |||| Sbjct 45446 ATAACTGATTTAATGAGCCATTCGCGGTTTCGCCTTA 45410 >seq128145 Length=2857 Score = 96.9 bits (106), Expect = 3e-15 Identities = 81/97 (84%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| ||||| |||||| |||| ||||||||||||| Sbjct 382 CATGTATTAGCTCTAGAATTACCACAGTTATGCAAGTAGTAAAGTACGATCTAAGGAACC 441 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTA 114428 | ||||| | || |||||||||| ||| ||| |||| Sbjct 442 ATAACTGGTTTAACGAGCCATTCGCGGTTTCGCCTTA 478 Score = 96.9 bits (106), Expect = 3e-15 Identities = 81/97 (84%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| ||||| |||||| |||| ||||||||||||| Sbjct 382 CATGTATTAGCTCTAGAATTACCACAGTTATGCAAGTAGTAAAGTACGATCTAAGGAACC 441 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTA 115625 | ||||| | || |||||||||| ||| ||| |||| Sbjct 442 ATAACTGGTTTAACGAGCCATTCGCGGTTTCGCCTTA 478 >seq454 Length=212681 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||| || ||||| || ||||| || |||||||| |||||| | |||||||| | Sbjct 116485 CCGCCTCGAAGTCGCAGGACGAGATGGAGAGTGCTCTCTTTCTGAGTATTGTAATCGCTC 116544 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 || || ||||| |||| |||||| || ||||| |||| ||||| ||||| ||| Sbjct 116545 AACGAACGATCGTCCTCCAGTTGCTTTCCCGCAAAAATCAACCGCTGTTGATCTGGCGGT 116604 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCAT 34080 | ||||| ||| |||||| | || | || | | | | || || || Sbjct 116605 ATATCTTCTTTATCCTGAATTTTCTCTTTTACAGACTTTATAGTGTCTGTCTGCTCAGCG 116664 Query 34081 TCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || | ||| || ||||| || || | |||||||||||| | |||||| Sbjct 116665 TCAATCGTGATCGTTTTGCCTGTCAATGTTTTCACAAAAAATTGCAT 116711 >seq22141 Length=76464 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/229 (70%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||| |||||||| || ||||| || |||||||| |||||||| ||||| || | Sbjct 26757 CCGCCTCGAAGCCGCAGTACGAGATGGAGTGTGCTCTCTTTCTGAATATTGTAGTCGCTC 26698 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 || || ||||| |||| |||||| || ||||| || | ||||| ||||| ||| Sbjct 26697 AAAGAACGATCGTCCTCCAGTTGCTTCCCCGCAAAGATTAACCGCTGTTGATCTGACGGT 26638 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGT-AGATTCGCA 34079 | | ||||| ||| |||||| | || | || | | | | || || || | || Sbjct 26637 ATACCTTCTTTATCCTGAATTTTCTCTTTCACAGATTTTATAGTGTCTGTCAGCTCAGCG 26578 Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCAC-AAAGATTTGCAT 34127 | ||| ||| || ||||| | || | |||||||| ||| | |||||| Sbjct 26577 T-CGATCGTGATCGTTTTGTCTGTCAACGTTTTCACAAAAAAATTGCAT 26530 >seq3578 Length=136689 Score = 91.5 bits (100), Expect = 1e-13 Identities = 82/100 (82%), Gaps = 5/100 (5%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTA---CCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGA 115585 |||||||| |||||||||||| |||| |||||||||||| | | |||||||||| Sbjct 12299 CATGTATTAGCTCTAGAATTATTACCACAGTTATCCAAGTAGTAAGGCATGATCTAAGGA 12240 Query 115586 ACCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTA 115625 |||| ||||||| || ||||||||||| ||| ||| |||| Sbjct 12239 ACCATAACTGATTTAATGAGCCATTCGCGGTTTCGCCTTA 12200 Score = 91.5 bits (100), Expect = 1e-13 Identities = 82/100 (82%), Gaps = 5/100 (5%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTA---CCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGA 114388 |||||||| |||||||||||| |||| |||||||||||| | | |||||||||| Sbjct 12299 CATGTATTAGCTCTAGAATTATTACCACAGTTATCCAAGTAGTAAGGCATGATCTAAGGA 12240 Query 114389 ACCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTA 114428 |||| ||||||| || ||||||||||| ||| ||| |||| Sbjct 12239 ACCATAACTGATTTAATGAGCCATTCGCGGTTTCGCCTTA 12200 >seq56889 Length=12386 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||||||||||| ||||||||| ||||| | ||| ||| ||||| || ||||| || | Sbjct 5603 ACCTCCTCTCAACCGCAGCACAAGATGCAATGTGGACTCTTTCTGGATATTGTAGTCGGA 5662 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || ||| | || || | |||||| || ||||| || || || ||||| || || Sbjct 5663 CAGGGTTCGGCCATCTTCAAGTTGCTTACCAGCAAAAATAAGACGTTGCTGGTCTGGGGG 5722 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACA---CTATCAGTAGATTC 34076 | || |||||||||| ||||||| || || | | || ||||| | | ||| Sbjct 5723 AATGCCCTCTTTGTCCTGAATTTTTGCCT---TGACATTTTCAATTGTATCACTGGGTTC 5779 Query 34077 GCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||| | ||||| || || || |||| || || ||||| || ||||| Sbjct 5780 CACTTCAAGTGTTATGGTCTTCCCTGTTAAAGTCTTGACAAAAATCTGCAT 5830 >seq23609 Length=38079 Score = 82.4 bits (90), Expect = 6e-11 Identities = 77/93 (83%), Gaps = 4/93 (4%) Strand=Plus/Minus Query 115541 TCTAGAATTACCAC-GTTATCCAAGTAACTGAG-TAAGATCTAAGGAACCAAAACTGATA 115598 |||||||||||||| |||||||||||| | || || |||||||||||||| || |||| Sbjct 38079 TCTAGAATTACCACAGTTATCCAAGTAG-TAAGATATGATCTAAGGAACCATAATTGATT 38021 Query 115599 TATTGAGCCATTCGTGGTATCGTCTTAAGTATG 115631 || |||| ||||| |||| | | ||| |||||| Sbjct 38020 TAATGAGTCATTCATGGTTTTG-CTTTAGTATG 37989 Score = 82.4 bits (90), Expect = 6e-11 Identities = 77/93 (83%), Gaps = 4/93 (4%) Strand=Plus/Minus Query 114344 TCTAGAATTACCAC-GTTATCCAAGTAACTGAG-TAAGATCTAAGGAACCAAAACTGATA 114401 |||||||||||||| |||||||||||| | || || |||||||||||||| || |||| Sbjct 38079 TCTAGAATTACCACAGTTATCCAAGTAG-TAAGATATGATCTAAGGAACCATAATTGATT 38021 Query 114402 TATTGAGCCATTCGTGGTATCGTCTTAAGTATG 114434 || |||| ||||| |||| | | ||| |||||| Sbjct 38020 TAATGAGTCATTCATGGTTTTG-CTTTAGTATG 37989 >seq15631 Length=58196 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||| || | || |||| ||| || ||||| || |||||||| |||||||| | Sbjct 20000 CCACCTCGAAGTCTCAAAACCAAATGGAGTGTGCTTTCTTTCTGAATATTGTAATCACTC 19941 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 || || || || |||| |||||| || |||||||||| ||||| || || || Sbjct 19940 AAGGAACGATCATCCTCCAGTTGCTTCCCCGCAAATATCAACCGCTGTTGCTCTGGAGGT 19881 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCAT 34080 | | |||||| ||| ||| || | || | | | | | || |||| || Sbjct 19880 ATCCCCTCTTTATCCTGAATCTTCTCTTTCACAGTCATTATGGTTTCTGTAGGCTCAGCG 19821 Query 34081 TCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTT 34130 || | ||| || ||||| || || || ||||||||||| | |||||| || Sbjct 19820 TCAATCGTGATCGTTTTGCCTGTCAGCGTTTTCACAAAAAATTGCATCTT 19771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396367176619330