Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1461 113 1e-19 >seq1461 Length=184759 Score = 113 bits (124), Expect = 1e-19 Identities = 259/388 (67%), Gaps = 4/388 (1%) Strand=Plus/Minus Query 297209 TCTTCTCCAGCAATCAATCGCTTCACGTTGTCTACGATGTCTTTTGGATTGTAACTAGGG 297268 ||||||||| | || || || | || ||||| | ||| ||||||||||| | | Sbjct 169763 TCTTCTCCACTCAACATGCGTTTTATATTCTCTACCAGTTCTCTTGGATTGTAATTTGAC 169704 Query 297269 ATATTAGTCGACCAACCGGTACCGATTCCACTCGAACCATTCACCAGAATGCTCGGAATA 297328 | || || ||| || || ||||| || | |||||| || || | | ||||| Sbjct 169703 ACTTTTGTGCTCCATCCAGTTCCGATACCTTCAGCACCATTGACAAGTACCATGGGAATG 169644 Query 297329 ACAGGCACATAATACTCTGGTTCGATCTTGTCACCGTCATCATACAGATATTTCAGAAGA 297388 | || |||||| | |||||||| || || | | ||||||||| | |||| ||| ||| Sbjct 169643 ATGGGAACATAAAATTCTGGTTCTATTTTCTTATTGTCATCATATAAATATCTCAAAAGT 169584 Query 297389 TTATCGTCCGTATCGACGAAAACCTG--TCGAGTCTGAGGGTTCAGTTTTGTGAAAATAT 297446 |||||| | | ||||| || |||||| ||| ||| | |||||||| | Sbjct 169583 GGCTCGTCC--AGAGCAGAAAATATGAAACGAGTCAATGGGCTCAACATGGTGAAAATGT 169526 Query 297447 ATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCCGGCA 297506 |||| | || || ||| || || || || || | | ||| ||||| || |||| Sbjct 169525 ATCGAGGGCTAGCAGCATCTTTGCCTCCTTGTAAACGAGTACCAAACTGACCGCTTGGCA 169466 Query 297507 ACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTT 297566 || || ||||| || || || ||| ||| ||| ||||| || | ||| || || Sbjct 169465 GTAAGACATTTATGTTGTTACTACCAACAAAATTCTGAGCAAGATTAATGATTGTGCCAG 169406 Query 297567 GCAGAGATGCTTCGCCATGGTGATAGGC 297594 || ||||||||| ||||| ||||| || Sbjct 169405 TCAAAGATGCTTCTCCATGATGATATGC 169378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1100849920167750