Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq56889 127 2e-24 seq5783 102 9e-17 seq78 98.7 1e-15 seq3779 96.9 4e-15 seq4561 91.5 2e-13 seq15631 89.7 6e-13 >seq56889 Length=12386 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||||||||| || |||| ||| | |||||||||| ||| || || |||||||| || | Sbjct 5603 ACCTCCTCTCAACCGCAGCACAAGATGCAATGTGGACTCTTTCTGGATATTGTAGTCGGA 5662 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||| || || | || || || ||||||||||| || || || || |||||||| | || Sbjct 5663 CAGGGTTCGGCCATCTTCAAGTTGCTTACCAGCAAAAATAAGACGTTGCTGGTCTGGGGG 5722 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159 | || ||| |||||| ||| |||||| |||| | | | || || || | ||||| Sbjct 5723 AATGCCCTCTTTGTCC-TGAATTTTTGCCTTGACATTTTCAATTGTATCACTGGGTTCCA 5781 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | || ||||| || || |||| ||||| ||||| || ||||| Sbjct 5782 CTTCAAGTGTTATGGTCTTCCCTGTTAAAGTCTTGACAAAAATCTGCAT 5830 Score = 104 bits (114), Expect = 3e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| | | |||||| | ||||| || || |||||||| || || || | Sbjct 6288 CCTCCTCTAAGCCTCAACACAAGGTGCAAGGTAGATTCTTTTTGAATGTTATAGTCTGAA 6347 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| || | || |||| |||||||||||| || || || || |||||||||| ||| Sbjct 6348 AGAGTACGACCATCTTCTAACTGCTTACCAGCAAAAATAAGACGTTGCTGGTCGGGTGGA 6407 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | || |||||||| ||| ||| |||| | | | ||||| || | ||| || Sbjct 6408 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTTGGTTCAACT 6467 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||||| ||||| || || | ||||| || || || ||||| Sbjct 6468 TCAAGAGTGATTGTTTTCCCAGTCAATGTCTTGACGAAAATCTGCAT 6514 Score = 104 bits (114), Expect = 3e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || | ||||| |||| ||| | || || || || || |||||||| | Sbjct 6516 CCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAA 6575 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| || | || || ||||| || |||||||| || | ||||||||||| | ||| Sbjct 6576 AGAGTGCGGCCATCTTCCAGCTGTTTGCCAGCGAAAATTAAACGCTGCTGGTCTGGTGGG 6635 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | || ||||| ||||||| || | | | | ||||| || | || || Sbjct 6636 ATACCTTCTTTGTCTTGGATTTTTGCCTTCACGTTTTCAATGGTGTCACTGGGCTCTACT 6695 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| |||||||| || |||||||||||||| ||||| Sbjct 6696 TCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTTACAAAGATCTGCAT 6742 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || | ||||| |||| ||| | || || || || || |||||||| | Sbjct 6060 CCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAA 6119 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || ||||| || ||||| || || | ||||||||||| | ||| Sbjct 6120 AGCGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGG 6179 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | || ||||| ||||||| || | | | | ||||| || | |||||| Sbjct 6180 ATACCTTCTTTGTCTTGGATTTTTGCCTTTACGTTTTCAATGGTGTCACTGGGTTCCACT 6239 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| |||||||| || ||||| |||||||| ||||| Sbjct 6240 TCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 6286 Score = 86.0 bits (94), Expect = 7e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || |||||||| | ||| ||||| ||||||||| || || || || ||||| || | | Sbjct 2967 CCACCTCTTAACCTCAAAACCAAGTGCAATGTGGATTCTTTCTGTATGTTGTAGTCTGAC 3026 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || |||| |||||| || || || || || || |||||||| | || Sbjct 3027 AGTGTTCGGCCATCTTCTAACTGCTTGCCTGCAAAAATAAGACGTTGCTGGTCTGGAGGA 3086 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | || ||||| |||||| ||| | || | | ||||| || | ||| || Sbjct 3087 ATACCTTCTTTGTCTTGTATTTTTGCTTTCACGTTCTCGATAGTGTCACTGGGTTCAACC 3146 Query 42162 TCGACCGTGATGGTTTTGCC 42181 || | || ||||||||||| Sbjct 3147 TCCAAGGTTATGGTTTTGCC 3166 Score = 86.0 bits (94), Expect = 7e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| | | |||||| | ||||| || || |||||||| || || || | Sbjct 5832 CCGCCTCTAAGCCTCAACACAAGATGCAGGGTAGATTCTTTTTGAATGTTATAGTCCGAA 5891 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || |||| |||||| ||||| || || || ||||||||||| | ||| Sbjct 5892 AGGGTACGACCATCTTCTAACTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGG 5951 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | || ||||| ||| ||| |||| | | | ||||| || | ||| || Sbjct 5952 ATACCTTCTTTGTCTTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTTGGTTCAACT 6011 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||||| ||||| || || | ||||| ||||| || ||||| Sbjct 6012 TCAAGAGTGATTGTTTTCCCAGTCAATGTCTTAACAAAAATCTGCAT 6058 >seq5783 Length=136462 Score = 102 bits (112), Expect = 9e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| || |||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 13206 AAAAAATTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 13147 Query 57058 TCACCACTATACTACCGAGGA 57078 | ||||||||||||||||||| Sbjct 13146 TGACCACTATACTACCGAGGA 13126 >seq78 Length=387153 Score = 98.7 bits (108), Expect = 1e-15 Identities = 148/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||||||||| || | || || | |||||||||| ||||||||| |||||| | || | Sbjct 279105 ACCTCCTCTCAACCACAGCATAAGATGCAATGTGGACTCCTTTTGGATATTGCAGTCTGA 279046 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||| || || | || | ||||||||||| | | || || || |||||||| | ||| Sbjct 279045 CAGGGTTCGGCCATCTCCGAGCTGCTTACCGGTAATAATAAGGCGTTGCTGGTCTGGTGG 278986 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCA-CCGTGTCGCTCGATTCCA 42159 | || ||| ||||| || |||| ||||| ||| || ||||| || | ||||| Sbjct 278985 AATGCCCTCTTTGTCTTGGAATTTTACTTTGA-TGTCTTCAGTTGTGTCACTGGCTTCCA 278927 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAG 42187 || | |||||||| || | |||||| Sbjct 278926 TTTCTAGTGTGATGGTCTTCCTCGTTAG 278899 >seq3779 Length=122314 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 93835 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 93894 Query 57067 TACTACCGAGGAT 57079 ||||||||||||| Sbjct 93895 TACTACCGAGGAT 93907 >seq4561 Length=102561 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| |||||||| |||||||||||| ||||| ||||||| Sbjct 87483 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCACGTGACAGGCGGGGATACTGACCACTA 87424 Query 57067 TACTACCGAGGAT 57079 ||||||||||||| Sbjct 87423 TACTACCGAGGAT 87411 >seq15631 Length=58196 Score = 89.7 bits (98), Expect = 6e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 ||| |||||||| | |||||| || || ||||||||||||||| || | || || || Sbjct 19986 CAAAACCAAATGGAGTGTGCTTTCTTTCTGAATATTGTAATCACTCAAGGAACGATCATC 19927 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || || ||||| || || ||||| | ||||| || || | || | | ||| || || Sbjct 19926 CTCCAGTTGCTTCCCCGCAAATATCAACCGCTGTTGCTCTGGAGGTATCCCCTCTTTATC 19867 Query 42116 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 42175 | || || | ||| | ||| | || || | | || | || | |||||| || Sbjct 19866 CTGAATCTTCTCTTTCACAGTCATTATGGTTTCTGTAGGCTCAGCGTCAATCGTGATCGT 19807 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTC 42212 |||||| || ||||| || ||||| | |||||| ||| Sbjct 19806 TTTGCCTGTCAGCGTTTTCACAAAAAATTGCATCTTC 19770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542237291663600