Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq56889 105 5e-18 seq23149 100 2e-16 seq95420 95.1 9e-15 seq39 93.3 3e-14 seq27075 84.2 2e-11 seq21612 82.4 5e-11 >seq56889 Length=12386 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 || || | ||| |||||||| ||||| || ||||||||||| ||| | | | ||| Sbjct 6531 AAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAAAGAGTGCGGCCATCT 6590 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || | |||||||||||| | || |||||||| ||||| ||| || ||||| ||||| Sbjct 6591 TCCAGCTGTTTGCCAGCGAAAATTAAACGCTGCTGGTCTGGTGGGATACCTTCTTTGTCT 6650 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||||| || || |||| || || || || ||||| || | || ||||| Sbjct 6651 TGGATTTTTGCCTTCACGTTTTCAATGGTGTCACTGGGCTCTACTTCAAGTGTGATGGTC 6710 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || || || |||||||| || |||||| Sbjct 6711 TTGCCCGTGAGGGTCTTTACAAAGATCTGCATA 6743 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 |||| |||| | || || || | || | |||||| |||||||| ||||| || || Sbjct 6286 TGCCTCCTCTAAGCCTCAACACAAGGTGCAAGGTAGATTCTTTTTGAATGTTATAGTCTG 6345 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 ||| | | | |||||||| || || ||||| | || | ||| || |||||| || Sbjct 6346 AAAGAGTACGACCATCTTCTAACTGCTTACCAGCAAAAATAAGACGTTGCTGGTCGGGTG 6405 Query 15068 GAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126 |||| ||||||||||| || ||||| || ||| |||| ||||| || || ||| Sbjct 6406 GAATGCCTTCCTTGTCTTGGATCTTTGC-CTTGACATTTTCGATAGTGTCACTTGGTTCA 6464 Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || | || || ||||| || |||| || || || ||||| ||||| Sbjct 6465 ACTTCAAGAGTGATTGTTTTCCCAGTCAATGTCTTGACGAAAATCTGCAT 6514 Score = 95.1 bits (104), Expect = 9e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 || || | ||| |||||||| ||||| || ||||||||||| || | | | ||| Sbjct 6075 AAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAAAGCGTGCGGCCATCT 6134 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || | ||||||||||| | || |||||||| ||||| ||| || ||||| ||||| Sbjct 6135 TCCAGCTGTTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGGATACCTTCTTTGTCT 6194 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||||| ||||| |||| || || || || ||| || || | || ||||| Sbjct 6195 TGGATTTTTGCCTTTACGTTTTCAATGGTGTCACTGGGTTCCACTTCAAGTGTGATGGTC 6254 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || || || || ||||| || ||||| Sbjct 6255 TTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 6286 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/203 (70%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || || ||||| || || | || || ||||| ||||||||||| | ||| Sbjct 2967 CCACCTCTTAACCTCAAAACCAAGTGCAATGTGGATTCTTTCTGTATGTTGTAGT--CTG 3024 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | | | ||| | |||||||| || ||||| || | || | ||| || ||||| | Sbjct 3025 ACAGTGTTCGGCCATCTTCTAACTGCTTGCCTGCAAAAATAAGACGTTGCTGGTCTGGAG 3084 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| ||||| ||||| ||||| ||| || | || ||||| || || ||| | Sbjct 3085 GAATACCTTCTTTGTCTTGTATTTTTGCTTTCACGTTCTCGATAGTGTCACTGGGTTCAA 3144 Query 15128 CGTCTAAGGTAATGGTTTTACCT 15150 | || ||||| |||||||| ||| Sbjct 3145 CCTCCAAGGTTATGGTTTTGCCT 3167 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081 || ||||| || || ||||| | || | |||||||||||| ||||| ||||| ||| Sbjct 5448 TCCTCTAACTGCTTACCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATGCCTTCTTTG 5507 Query 15082 TCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141 || |||||| || || | ||||| ||||| || || || || |||||||| Sbjct 5508 TCCTGAATTTTTGCCTTGACGTTCTCTATTGTATCACTTGACTCAACATCCAAGGTAATT 5567 Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || |||| || || |||||||| |||||| Sbjct 5568 GTCTTCCCAGTCAATGTCTTCACAAAAATCTGCATA 5603 >seq23149 Length=43904 Score = 100 bits (110), Expect = 2e-16 Identities = 159/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || ||| ||||| | ||| | || |||||||| || || |||||||| Sbjct 19843 CCACCTCTCAGTCTCAAAACAAGATGTAAAGTGTTTTCTTTTTGAATATTATAATCGCTT 19902 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | || || | || || || ||||||||||| | || | || || || ||| |||| Sbjct 19903 AATATCCTATCATCCTCCAACTGTTTGCCAGCAAAAATAAGCCGTTGCTGATCGGGTGGA 19962 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||| ||||| ||||| |||| ||| |||| ||||| | | || || Sbjct 19963 ATTCCTTCTTTGTCTTGAATTTGTTTTTTAACACTTTCAATAGT-TGG-----TTGAACA 20016 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || || ||||| || ||| |||||| ||||| | |||||| Sbjct 20017 TCGATAGTGATTGTTTTTCCATTCAAAGTTTTCACAAATAATTGCAT 20063 >seq95420 Length=6446 Score = 95.1 bits (104), Expect = 9e-15 Identities = 161/232 (69%), Gaps = 5/232 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || ||| ||||| | ||| | || |||||||| || || |||||||| Sbjct 33 CCACCTCTCAGTCTCAAAACAAGATGTAAAGTGTTTTCTTTTTGAATATTATAATCGCTT 92 Query 15010 AGA----ATTCTCG-CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGT 15064 | ||| | | || ||||| ||||||||||| | || | || || || ||| Sbjct 93 AATTAATATTATAATCATCCTCTAACTGTTTGCCAGCAAAAATAAGTCGTTGCTGATCGG 152 Query 15065 TTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTT 15124 |||||||||||| ||||| ||| | ||| ||| |||| |||||||| | || Sbjct 153 GTGGAATTCCTTCTTTGTCTTGAATATATTTTTGCACACTTTCAATAGTATCTGTTGGTT 212 Query 15125 CTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || | || || ||||| || |||| |||||| ||||| | |||||| Sbjct 213 GAACATCGATAGTGATTGTTTTTCCAGTCAAAGTTTTCACAAATAATTGCAT 264 >seq39 Length=467114 Score = 93.3 bits (102), Expect = 3e-14 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||||| | ||| || | || |||||||| || || || ||||| || || Sbjct 391819 TGCCACCTCTTAGTCTGCGAATAAGATATAGGGTAGATTCCTTCTGGATGTTATAGTC-- 391762 Query 15008 TGAGAAT-TCTCGC-GTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTT 15065 ||| ||| ||| | ||||| || || || ||||| | | | | |||||||||| Sbjct 391761 TGACAATGTCTTTCCGTCTTGTAGCTGCTTACCAGCAAAGGTAAGATGCTGTTGGTCAGG 391702 Query 15066 TGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTC 15125 ||||||||| || ||||| ||| ||| | || || ||||||| ||||| || | Sbjct 391701 TGGAATTCCATCTTTGTCCTGAATCTTGGTCTTAACGTTTTCTATTGTATCACTGGACTG 391642 Query 15126 TACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || |||||||||||| || || | ||||| | || |||| ||| ||||| Sbjct 391641 TATGTCTAAGGTAATTGTCTTCCTGGTCAGTATCTTCACAACAATCGGCATA 391590 >seq27075 Length=32029 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/196 (71%), Gaps = 10/196 (5%) Strand=Plus/Minus Query 14986 TCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGT 15043 ||||| || |||||| | || || ||| ||| | ||||| || ||||| |||||| Sbjct 13797 TCTTTCTGCATGTTGCAGTCA--GATAATGTTCGACCATCTTCGAACTGTTTACCAGCGA 13740 Query 15044 ATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT-GCTTTTTACA 15102 | || | ||||||||| ||||| ||||| | ||| ||||| || || | Sbjct 13739 AAATAAGCTTCTGTTGGTCTAGAGGAATGCCTTCTTCGTCTTGTATTTTAGCCTTG---A 13683 Query 15103 ATTTCT--ATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTT 15160 | |||| |||||| | | |||||| || ||||| || ||||||||||| ||||| | Sbjct 13682 AGTTCTCAATAGTAACACCGGGTTCTACCTCCAAGGTTATTGTTTTACCTGTAAGAGTCT 13623 Query 15161 TTACAAAAATTTGCAT 15176 |||||| |||||||| Sbjct 13622 TTACAAGGATTTGCAT 13607 >seq21612 Length=42895 Score = 82.4 bits (90), Expect = 5e-11 Identities = 141/201 (70%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 14986 TCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTAT 15045 |||||||| || || ||||| | | || || |||| ||||| ||| ||||||| | Sbjct 3872 TCTTTTTGAATATTATAATCATTCAATATCCTATCGTCCTCTAACTGTCTGCCAGCAAAA 3931 Query 15046 ATCAAACGCT---GTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACA 15102 || | |||| | || ||| |||||||||||| ||||| ||||| |||| ||| Sbjct 3932 ATAAGTCGCTCCTGCTGTTCGGGTGGAATTCCTTCTTTGTCTTGAATTTGTTTTTTGACA 3991 Query 15103 ATTTCTATAGTATCGCTATTTTCT--ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTT 15160 || | ||||||| || || || || || | || || |||| ||| |||| ||||| Sbjct 3992 TTTCCAATAGTAT--CTGTTGGCTGAACATCGATAGTGATCGTTTCACCAGTCAAAGTTT 4049 Query 15161 TTA-CAAAAATTTGCATATTT 15180 | | | || | |||||| ||| Sbjct 4050 TCACCGAATAATTGCATCTTT 4070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356766236204525