Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq31000 93.3 5e-14 seq2243 89.7 6e-13 seq62528 84.2 3e-11 >seq31000 Length=33412 Score = 93.3 bits (102), Expect = 5e-14 Identities = 134/188 (71%), Gaps = 1/188 (1%) Strand=Plus/Plus Query 116428 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 116487 ||||| | ||||||| ||| || || | ||||||||| | |||||| | |||| Sbjct 21723 AGGGCTAAAGACGCCAAATTGCAAACGGCCGTCTCATCCGGCGAACTGTACTGCACAATT 21782 Query 116488 TCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 116547 || | || | ||| || | | ||||||||||||| || || || || | || Sbjct 21783 TCTGAGCAGAGATTACTACACGTGATGGTGCCCAAGTGACGCTGGTTCGATTTGGCATTG 21842 Query 116548 CACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 116607 ||||| | ||||||||||| || ||||| ||||| ||| |||| || |||||||| || Sbjct 21843 CACGCGAC-TTGTAGAGCATGTACGGCGTTCCCGTTTCCATTTGCGATTTGAGAATGGCT 21901 Query 116608 TTCCATAC 116615 ||||| || Sbjct 21902 TTCCACAC 21909 >seq2243 Length=133560 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 116512 ATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATAT 116571 |||||||||| || || || ||||||| ||| ||||| |||||||||||||| || Sbjct 81360 ATGGTGCCCAGGTGACGCTGGTTGGACTTTGCGTTGCACGCGTCCTTGTAGAGCATGTAC 81419 Query 116572 GGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATAC 116615 ||||| ||||| ||||| || || ||||| || || ||||| || Sbjct 81420 GGCGTTCCCGTTTCCGTCTGCGATTTGAGGATGGCATTCCAGAC 81463 >seq62528 Length=8633 Score = 84.2 bits (92), Expect = 3e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 116512 ATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATAT 116571 ||||| ||||||| | || || || || | ||| ||||| |||||||||||||| || Sbjct 4060 ATGGTACCCAAGTGACTCTGGTTGGATTTGGCGTTGCACGCGTCCTTGTAGAGCATGTAC 4119 Query 116572 GGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610 ||||| ||||| ||| |||| || |||||||| || ||| Sbjct 4120 GGCGTTCCCGTTTCCATTTGCGATTTGAGAATGGCTTTC 4158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612405456101400