Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq31000 93.3 5e-14
seq2243 89.7 6e-13
seq62528 84.2 3e-11
>seq31000
Length=33412
Score = 93.3 bits (102), Expect = 5e-14
Identities = 134/188 (71%), Gaps = 1/188 (1%)
Strand=Plus/Plus
Query 116428 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 116487
||||| | ||||||| ||| || || | ||||||||| | |||||| | ||||
Sbjct 21723 AGGGCTAAAGACGCCAAATTGCAAACGGCCGTCTCATCCGGCGAACTGTACTGCACAATT 21782
Query 116488 TCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 116547
|| | || | ||| || | | ||||||||||||| || || || || | ||
Sbjct 21783 TCTGAGCAGAGATTACTACACGTGATGGTGCCCAAGTGACGCTGGTTCGATTTGGCATTG 21842
Query 116548 CACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 116607
||||| | ||||||||||| || ||||| ||||| ||| |||| || |||||||| ||
Sbjct 21843 CACGCGAC-TTGTAGAGCATGTACGGCGTTCCCGTTTCCATTTGCGATTTGAGAATGGCT 21901
Query 116608 TTCCATAC 116615
||||| ||
Sbjct 21902 TTCCACAC 21909
>seq2243
Length=133560
Score = 89.7 bits (98), Expect = 6e-13
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 116512 ATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATAT 116571
|||||||||| || || || ||||||| ||| ||||| |||||||||||||| ||
Sbjct 81360 ATGGTGCCCAGGTGACGCTGGTTGGACTTTGCGTTGCACGCGTCCTTGTAGAGCATGTAC 81419
Query 116572 GGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATAC 116615
||||| ||||| ||||| || || ||||| || || ||||| ||
Sbjct 81420 GGCGTTCCCGTTTCCGTCTGCGATTTGAGGATGGCATTCCAGAC 81463
>seq62528
Length=8633
Score = 84.2 bits (92), Expect = 3e-11
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 116512 ATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATAT 116571
||||| ||||||| | || || || || | ||| ||||| |||||||||||||| ||
Sbjct 4060 ATGGTACCCAAGTGACTCTGGTTGGATTTGGCGTTGCACGCGTCCTTGTAGAGCATGTAC 4119
Query 116572 GGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610
||||| ||||| ||| |||| || |||||||| || |||
Sbjct 4120 GGCGTTCCCGTTTCCATTTGCGATTTGAGAATGGCTTTC 4158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 612405456101400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |