Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1004 114 2e-20 seq15708 100 5e-16 seq52744 91.5 2e-13 seq7405 89.7 8e-13 seq28800 86.0 1e-11 seq16152 84.2 3e-11 >seq1004 Length=176236 Score = 114 bits (126), Expect = 2e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 203845 CACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTT 203904 ||| || ||||| ||||||| | || || || | | || ||||||||||| ||||| Sbjct 32114 CACGGTAAACTGCTCGGCGTTCGCTGCCGGTTTGTTCCGGAGGTAGTACATGCCCGTCTT 32055 Query 203905 TAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGC 203964 || ||| || ||| ||||| | ||||||| | ||||||| || | || || || Sbjct 32054 GAGTCCCAACTTCCAACCGTAAAAGTGCATGCTCGTCAGTTTGGCTTCGCTCGGATCTGC 31995 Query 203965 CATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATT 204024 ||||| ||||||| ||||| || || ||||| || || | ||||| || ||||| || Sbjct 31994 CATGTACATGTTCATCGACTGACTCTGATCGATAAATGGACCGCGATCGGCCGCCATCTT 31935 Query 204025 GATAATGGTCTTCTGCGAAATCTCCCACACCGT 204057 | | ||||| |||| ||| |||||||| || Sbjct 31934 CAGTAGCGTCTTTTGCGGAATTTCCCACACGGT 31902 >seq15708 Length=44177 Score = 100 bits (110), Expect = 5e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 203860 GGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCA 203919 ||| ||| | || || |||| | || ||||||||||| ||||| || || || ||| Sbjct 33807 GGCATTCGCCGCCGGTTTGCTCCGGAGGTAGTACATGCCCGTCTTGAGTCCTAACTTCCA 33866 Query 203920 CCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAG 203979 ||||| | ||||||| | ||||||| || | || || ||||||| | ||||| Sbjct 33867 ACCGTAAAAGTGCATGCTCGTCAGTTTGGCTTCGCTCGGATCCGCCATGTACACGTTCAT 33926 Query 203980 AGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGTCTTCTG 204039 ||||| || || ||||| || || | ||||| || ||||| || | | ||||| || Sbjct 33927 CGACTGACTCTGATCGATAAATGGACCGCGATCGGCCGCCATCTTCAGCAGCGTCTTTTG 33986 Query 204040 CGAAATCTCCCACACCGT 204057 || ||| |||||||| || Sbjct 33987 CGGAATTTCCCACACGGT 34004 >seq52744 Length=12040 Score = 91.5 bits (100), Expect = 2e-13 Identities = 126/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 203885 AGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGT 203944 || ||||||||||| ||||| || || || ||| ||||| | |||||| | |||| Sbjct 3283 AGGTAGTACATGCCCGTCTTCAGTCCTAACTTCCAACCGTAAAAATGCATGCTCGTCAGT 3342 Query 203945 TTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGC 204004 ||| || | || || ||||||| | ||||| || || ||||| || || ||| || Sbjct 3343 TTGGCTTCGCTCGGCTCCGCCATGTACACGTTCATCGATTGACTTTGATCAAT-AAAAGC 3401 Query 204005 GCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGT 204057 ||| ||||| || ||||| || | | ||||| |||| ||| |||||||| || Sbjct 3402 GCCACGATCGGCTGCCATTTTCAACAGCGTCTTTTGCGGAATTTCCCACACAGT 3455 >seq7405 Length=74570 Score = 89.7 bits (98), Expect = 8e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 203845 CACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTT 203904 ||| || ||||| | | |||| | || || |||| | || ||||||||||| ||||| Sbjct 57506 CACGGTAAACTGCACTGTGTTCGCTGCCGGTTTGCTCCGGAGGTAGTACATGCCCGTCTT 57565 Query 203905 TAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGC 203964 || ||| || ||| ||||| | ||||||| | || |||| | | || || || Sbjct 57566 GAGTCCCAACTTCCAACCGTAAAAGTGCATGTTCGTCAATTTGGCTTCTCTCGGATCCGC 57625 Query 203965 CATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATAT 204023 ||| | | ||||| ||||| || || ||||| ||| ||||| ||||| || ||||| | Sbjct 57626 CATTTACACGTTCATCGACTGACTCTGATCGAT-AAAAGCGCCGCGATCGGCTGCCATCT 57684 Query 204024 TGATAATGGTCTTCTGCGAAATCTCCCACAC 204054 | | | || || |||| ||| || ||||| Sbjct 57685 TCAGTAGCGTTTTTTGCGGAATTTCTCACAC 57715 >seq28800 Length=31993 Score = 86.0 bits (94), Expect = 1e-11 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 203845 CACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTT 203904 ||| || ||||| | ||||||||| || | |||| | | ||||||||||| |||| Sbjct 5634 CACGGTAAACTGCAAGGCGTTCACTGCCGATTTGCTGCAGATGTAGTACATGCCCGTCTC 5693 Query 203905 TAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGC 203964 ||| || | ||| ||||| ||||||||| | |||||| || | || || | Sbjct 5694 TAGTCCTAACGCCCAACCGTAAATGTGCATGCTCGTTAGTTTGGCTTCGCTCGGATCCTC 5753 Query 203965 CATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATAT 204023 ||||| | ||||| ||||| || || ||||| ||| ||||| |||| || ||||| | Sbjct 5754 CATGTACACGTTCATCGACTGACTCTGATCGAT-AAAAGCGCCGCGATTGGCCGCCATTT 5812 Query 204024 TGATAATGGTCTTCTGCGAAATCTCCCACAC 204054 | | | ||||| || | | |||||||| Sbjct 5813 TCAACAGCGTCTTTTGTGGCGTTTCCCACAC 5843 >seq16152 Length=64332 Score = 84.2 bits (92), Expect = 3e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 203877 TGCTTCTCAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGG 203936 |||| | || ||||||||||| ||||| || || | ||| ||||| | ||||||| Sbjct 47427 TGCTGCGGAGGTAGTACATGCCCGTCTTCAGTCCTAACGCCCAACCGTAAAAGTGCATGC 47368 Query 203937 AAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGA 203996 | ||||||| || | | || ||||||| | ||||| ||||| || || || | Sbjct 47367 CCGTCAGTTTGGCTTCGCTCAGATCCGCCATGTACACGTTCATCGACTGACTCTGATCAA 47308 Query 203997 TGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCG 204056 | |||| | |||||||| ||||| || | || ||||| |||| ||| || | ||| | Sbjct 47307 TAAAAGCACCACGATCTGCCGCCATTTTCAAAAGCGTCTTTTGCGGAATTTCTCGCACGG 47248 Query 204057 T 204057 | Sbjct 47247 T 47247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793727250352400