Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq56889 122 2e-22 seq9166 95.1 3e-14 seq39 89.7 1e-12 seq15631 87.8 4e-12 seq17656 84.2 5e-11 >seq56889 Length=12386 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 |||| || ||| || || || || || || || |||| |||||| || | | ||| | Sbjct 6525 AGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAAAGAGTGCGG 6584 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||||||||| || || ||||| || | |||||||||||| || || |||||| Sbjct 6585 CCATCTTCCAGCTGTTTGCCAGCGAAAATTAAACGCTGCTGGTCTGGTGGGATACCTTCT 6644 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || || || ||| ||||||| ||| | |||||| | | ||||| || | ||| Sbjct 6645 TTGTCTTGGATTTTTGCCTTCACGTTTTCAATGGTGTCACTGGGCTCTACTTCAAGTGTG 6704 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| |||||||| || || ||||| || || Sbjct 6705 ATGGTCTTGCCCGTGAGGGTCTTTACAAAGATCTG 6739 Score = 116 bits (128), Expect = 9e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 199445 TGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGA 199504 |||| ||| ||||| | ||||||||| ||||| || | |||||| || || ||||| ||| Sbjct 5418 TGGATGTTATAGTCCGACAAAGTCCTGCCATCCTCTAACTGCTTACCAGCAAAGATAAGA 5477 Query 199505 CGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACG 199564 ||||| ||||| || ||| |||||| |||||||| ||| ||| ||| || | Sbjct 5478 CGCTGTTGGTCTGGGGGAATGCCTTCTTTGTCCTGAATTTTTGCCTTGACGTTCTCTATT 5537 Query 199565 GTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATT 199624 || || ||| || |||||||| || || ||||| || || | || ||||||||||| Sbjct 5538 GTATCACTTGACTCAACATCCAAGGTAATTGTCTTCCCAGTCAATGTCTTCACAAAAATC 5597 Query 199625 TG 199626 || Sbjct 5598 TG 5599 Score = 113 bits (124), Expect = 1e-19 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 |||| || ||| || || || || || || || |||| |||||| || | | || | Sbjct 6069 AGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAAAGCGTGCGG 6128 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||||||||| || || || || || | |||||||||||| || || |||||| Sbjct 6129 CCATCTTCCAGCTGTTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGGATACCTTCT 6188 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || || || ||| ||| ||| ||| | |||||| | | ||| || || | ||| Sbjct 6189 TTGTCTTGGATTTTTGCCTTTACGTTTTCAATGGTGTCACTGGGTTCCACTTCAAGTGTG 6248 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| |||||||| || |||||||| || || Sbjct 6249 ATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTG 6283 Score = 107 bits (118), Expect = 5e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 || ||| |||| ||||| || || || || || ||||| | ||| ||||| | | || Sbjct 5837 TCTAAGCCTCAACACAAGATGCAGGGTAGATTCTTTTTGAATGTTATAGTCCGAAAGGGT 5896 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | |||||||| | ||||||||| || || || |||||||||||||| || || || Sbjct 5897 ACGACCATCTTCTAACTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGGATACC 5956 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 |||| || || |||||| ||| || ||||| ||||| ||| ||| || || | Sbjct 5957 TTCTTTGTCTTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTTGGTTCAACTTCAAG 6016 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || | || || |||||||| || Sbjct 6017 AGTGATTGTTTTCCCAGTCAATGTCTTAACAAAAATCTG 6055 Score = 100 bits (110), Expect = 7e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || |||| || || ||||| || || ||||| || |||| |||||||| | ||| || Sbjct 6750 CGGAGTCGTAGAACCAGGTGAAGGGTTGACTCTTTCTGGATATTGTAGTCTGACAAGGTA 6809 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| || ||||| || || || || | | ||||||||| ||| ||| || Sbjct 6810 CGACCATCTTCTAGTTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCAGGAGGAATACCC 6869 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || || || |||||| ||| | ||| || | | ||| || || | Sbjct 6870 TCTTTATCTTGGATTTTAGCCTTCACATTTTCAATGGTATCACTGGGTTCAACCTCAAGG 6929 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAAT 199623 || || ||||| || || || ||||||||||| || Sbjct 6930 GTTATGGTCTTGCCAGTAAGTGTTTTCACAAAGAT 6964 >seq9166 Length=72308 Score = 95.1 bits (104), Expect = 3e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 |||||||| |||||||| | ||| || ||||| | || || ||| ||| ||| Sbjct 29282 AGTCTCAGAACAAGGTGTAAAGTGTTTTCTTTTTGAATATTATAATCATTCAATATCCGA 29341 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||| ||| || ||||| || || || ||||| || || || |||||||||| Sbjct 29342 TTATCTTCCAACTGTTTGCCGGCAAAAATAAGTCGCTGTTGTTCAGGTGGAATTCCTTCT 29401 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || ||||| | || || || ||| | ||||||||| | || ||||| | || Sbjct 29402 TTATCTTGAATTTGTTTTTTAACAATTTCAATGGTGTCTGTCGGCTCAACATCGATAGTA 29461 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || | | |||||||||||| | ||| Sbjct 29462 ATTGTTTTCCCACTTAAAGTTTTCACAAATAATTG 29496 >seq39 Length=467114 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| | | ||| | || || || ||||| |||| ||| ||||| | ||| ||| || Sbjct 391808 AGTCTGCGAATAAGATATAGGGTAGATTCCTTCTGGATGTTATAGTCTGACAATGTCTTT 391749 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 || |||| |||||||| || || ||| | ||| |||| ||||| || |||||| ||| Sbjct 391748 CCGTCTTGTAGCTGCTTACCAGCAAAGGTAAGATGCTGTTGGTCAGGTGGAATTCCATCT 391689 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||||||||| ||| ||| ||| | || || | | | || || || || Sbjct 391688 TTGTCCTGAATCTTGGTCTTAACGTTTTCTATTGTATCACTGGACTGTATGTCTAAGGTA 391629 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAAT 199623 || ||||| | || || | ||||||| ||| Sbjct 391628 ATTGTCTTCCTGGTCAGTATCTTCACAACAAT 391597 >seq15631 Length=58196 Score = 87.8 bits (96), Expect = 4e-12 Identities = 153/221 (69%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 ||||||||||| || | ||||| || || || || | ||||| ||| ||| | Sbjct 19995 TCGAAGTCTCAAAACCAAATGGAGTGTGCTTTCTTTCTGAATATTGTAATCACTCAAGGA 19936 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | |||| ||||| ||||| || || || || | ||||| || || ||| || || Sbjct 19935 ACGATCATCCTCCAGTTGCTTCCCCGCAAATATCAACCGCTGTTGCTCTGGAGGTATCCC 19876 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGG--ATTCGACGGTGTCTGTTGTTTCTACATCC 199585 ||| ||||||||||| | ||||| | ||| | ||| ||||| | || | || Sbjct 19875 CTCTTTATCCTGAATCTTCTCTTTCACAGTCATT--ATGGTTTCTGTAGGCTCAGCGTCA 19818 Query 199586 AACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | ||||||||| || || || || ||||||||||||| ||| Sbjct 19817 ATCGTGATCGTTTTGCCTGTCAGCGTTTTCACAAAAAATTG 19777 >seq17656 Length=61091 Score = 84.2 bits (92), Expect = 5e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||| | |||||| || ||||| || ||| || || | |||||||| ||| | Sbjct 9311 TCGAAGCCGCAGGACGAGATGGAGGGTGCTCTCTTTCTGAATATTGTAGTCGCTCAACGA 9252 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | | || ||||| |||||||| || || || | ||||| || || || || || Sbjct 9251 GCGATCGTCCTCCAGTTGCTTTCCCGCAAAAATCAACCGCTGTTGATCTGGCGGTATACC 9192 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 |||| || ||||| || | || || || | | ||||||||| || | || | Sbjct 9191 TTCTTTATCTTGAATTTTCTCTTTTACAGACTTTATAGTGTCTGTTAGCTCAGCTTCGAT 9132 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||| || || || | ||||||||||||| ||| Sbjct 9131 CGTGATCGTTTTGCCTGTCAATGTTTTCACAAAAAATTG 9093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176751549800555