Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq56889 111 2e-19 seq78 89.7 6e-13 seq15631 87.8 2e-12 seq1004 86.0 7e-12 >seq56889 Length=12386 Score = 111 bits (122), Expect = 2e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| || | ||||| |||||||| | ||| || || ||||| ||||| || | Sbjct 6058 TGCCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTG 6117 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||| ||||| || || || || ||||||||||| | | Sbjct 6118 AAAGCGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTG 6177 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | || ||||| ||| || ||| | | | | ||||| || | ||||| Sbjct 6178 GGATACCTTCTTTGTCTTGGATTTTTGCCTTTACGTTTTCAATGGTGTCACTGGGTTCCA 6237 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | |||||||| |||||||| || || || |||||||| ||||| Sbjct 6238 CTTCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 6286 Score = 111 bits (122), Expect = 2e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| || | ||||| |||||||| | ||| || || ||||| ||||| || | Sbjct 6514 TGCCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTG 6573 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | |||||||| | || || ||||| ||||| ||||| || || ||||||||||| | | Sbjct 6574 AAAGAGTGCGGCCATCTTCCAGCTGTTTGCCAGCGAAAATTAAACGCTGCTGGTCTGGTG 6633 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | || ||||| ||| || ||| | | | | ||||| || | || | Sbjct 6634 GGATACCTTCTTTGTCTTGGATTTTTGCCTTCACGTTTTCAATGGTGTCACTGGGCTCTA 6693 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | |||||||| |||||||| || || || |||||||| ||||| Sbjct 6694 CTTCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTTACAAAGATCTGCAT 6742 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| || |||| ||| ||||||||||| ||| || ||||||||||||||||| Sbjct 5604 CCTCCTCTCAACCGCAGCACAAGATGCAATGTGGACTCTTTCTGGATATTGTAGTCGGAC 5663 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || | || || || ||||| || || || || | || |||||||| | || Sbjct 5664 AGGGTTCGGCCATCTTCAAGTTGCTTACCAGCAAAAATAAGACGTTGCTGGTCTGGGGGA 5723 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||| |||||| || || ||||| | | | || || || | |||||| Sbjct 5724 ATGCCCTCTTTGTCCTGAATTTTTGCCTTGACATTTTCAATTGTATCACTGGGTTCCACT 5783 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || ||||| || || || | || || ||||| || ||||| Sbjct 5784 TCAAGTGTTATGGTCTTCCCTGTTAAAGTCTTGACAAAAATCTGCAT 5830 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| ||||| | | |||||| ||||||| ||| || ||||| || || ||||| | Sbjct 5830 TGCCGCCTCTAAGCCTCAACACAAGATGCAGGGTAGATTCTTTTTGAATGTTATAGTCCG 5889 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || || || | || || | |||||| || || || |||| ||||||||||| | | Sbjct 5890 AAAGGGTACGACCATCTTCTAACTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTG 5949 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | || ||||| |||||| ||||| | | | ||||| || | ||| | Sbjct 5950 GGATACCTTCTTTGTCTTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTTGGTTCAA 6009 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | ||||| ||||| || |||| || |||||||| || ||||| Sbjct 6010 CTTCAAGAGTGATTGTTTTCCCAGTCAATGTCTTAACAAAAATCTGCAT 6058 >seq78 Length=387153 Score = 89.7 bits (98), Expect = 6e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| || | || || ||||||||||| |||||||||||||||| |||| || Sbjct 279104 CCTCCTCTCAACCACAGCATAAGATGCAATGTGGACTCCTTTTGGATATTGCAGTCTGAC 279045 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || | || |||||||||| |||| | || | ||| |||||||| | || Sbjct 279044 AGGGTTCGGCCATCTCCGAGCTGCTTACCGGTAATAATAAGGCGTTGCTGGTCTGGTGGA 278985 Query 46487 ACGCTCTCCTTGTC 46500 | || ||| ||||| Sbjct 278984 ATGCCCTCTTTGTC 278971 >seq15631 Length=58196 Score = 87.8 bits (96), Expect = 2e-12 Identities = 162/238 (68%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 ||||| | || |||| | | ||| |||| ||| | ||| || || || || ||||||| Sbjct 20008 ATTATGTTCCACCTCGAAGTCTCAAAACCAAATGGAGTGTGCTTTCTTTCTGAATATTGT 19949 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 | || | | || || || || || ||||| || || |||||||| ||||| || | Sbjct 19948 AATCACTCAAGGAACGATCATCCTCCAGTTGCTTCCCCGCAAATATCAACCGCTGTTGCT 19889 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCG 46538 | | || | | ||| || ||| ||||||| || | ||| | || || | | Sbjct 19888 CTGGAGGTATCCCCTCTTTATCCTGAATCTTCTCTTTCACAGTCATTATGGTTTCTGTAG 19829 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || | || | |||||| |||||||| ||||||||||| ||||| | |||||| || Sbjct 19828 GCTCAGCGTCAATCGTGATCGTTTTGCCTGTCAGCGTTTTCACAAAAAATTGCATCTT 19771 >seq1004 Length=176236 Score = 86.0 bits (94), Expect = 7e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || ||||| | || ||||| || || |||||||||||| || | ||| ||| Sbjct 108932 CGCAGGACGAGATGGAGGGTGCTCTCTTTCTGAATATTGTAGTCGCTCAGCGAGCGATCG 108873 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || || ||||| || || || ||||| ||||| || || | ||| | | || || Sbjct 108872 TCCTCCAGTTGCTTTCCCGCAAAAATCAACCGCTGTTGATCTGGCGGTATACCTTCTTTA 108813 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 || || |||| || | | | | ||||| || ||| | || | |||||| Sbjct 108812 TCTTGAATTTTCTCTTTTACAGACTTTATAGTGTCTGTCTGTTCAGCTTCGATCGTGATC 108753 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||||| |||| ||||| ||||| | |||||| Sbjct 108752 GTTTTGCCTGTCAATGTTTTCACAAAAAATTGCAT 108718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564223337815800