Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq56889 111 2e-19
seq78 89.7 6e-13
seq15631 87.8 2e-12
seq1004 86.0 7e-12
>seq56889
Length=12386
Score = 111 bits (122), Expect = 2e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
||||||| || | ||||| |||||||| | ||| || || ||||| ||||| || |
Sbjct 6058 TGCCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTG 6117
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| || ||||| | || || ||||| ||||| || || || || ||||||||||| | |
Sbjct 6118 AAAGCGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTG 6177
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544
| | | || ||||| ||| || ||| | | | | ||||| || | |||||
Sbjct 6178 GGATACCTTCTTTGTCTTGGATTTTTGCCTTTACGTTTTCAATGGTGTCACTGGGTTCCA 6237
Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| || | |||||||| |||||||| || || || |||||||| |||||
Sbjct 6238 CTTCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 6286
Score = 111 bits (122), Expect = 2e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
||||||| || | ||||| |||||||| | ||| || || ||||| ||||| || |
Sbjct 6514 TGCCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTG 6573
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| |||||||| | || || ||||| ||||| ||||| || || ||||||||||| | |
Sbjct 6574 AAAGAGTGCGGCCATCTTCCAGCTGTTTGCCAGCGAAAATTAAACGCTGCTGGTCTGGTG 6633
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544
| | | || ||||| ||| || ||| | | | | ||||| || | || |
Sbjct 6634 GGATACCTTCTTTGTCTTGGATTTTTGCCTTCACGTTTTCAATGGTGTCACTGGGCTCTA 6693
Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| || | |||||||| |||||||| || || || |||||||| |||||
Sbjct 6694 CTTCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTTACAAAGATCTGCAT 6742
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|||||||| || |||| ||| ||||||||||| ||| || |||||||||||||||||
Sbjct 5604 CCTCCTCTCAACCGCAGCACAAGATGCAATGTGGACTCTTTCTGGATATTGTAGTCGGAC 5663
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| || || | || || || ||||| || || || || | || |||||||| | ||
Sbjct 5664 AGGGTTCGGCCATCTTCAAGTTGCTTACCAGCAAAAATAAGACGTTGCTGGTCTGGGGGA 5723
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || ||| |||||| || || ||||| | | | || || || | ||||||
Sbjct 5724 ATGCCCTCTTTGTCCTGAATTTTTGCCTTGACATTTTCAATTGTATCACTGGGTTCCACT 5783
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| | || ||||| || || || | || || ||||| || |||||
Sbjct 5784 TCAAGTGTTATGGTCTTCCCTGTTAAAGTCTTGACAAAAATCTGCAT 5830
Score = 98.7 bits (108), Expect = 1e-15
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||| ||||| | | |||||| ||||||| ||| || ||||| || || ||||| |
Sbjct 5830 TGCCGCCTCTAAGCCTCAACACAAGATGCAGGGTAGATTCTTTTTGAATGTTATAGTCCG 5889
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| || || || | || || | |||||| || || || |||| ||||||||||| | |
Sbjct 5890 AAAGGGTACGACCATCTTCTAACTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTG 5949
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544
| | | || ||||| |||||| ||||| | | | ||||| || | ||| |
Sbjct 5950 GGATACCTTCTTTGTCTTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTTGGTTCAA 6009
Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| || | ||||| ||||| || |||| || |||||||| || |||||
Sbjct 6010 CTTCAAGAGTGATTGTTTTCCCAGTCAATGTCTTAACAAAAATCTGCAT 6058
>seq78
Length=387153
Score = 89.7 bits (98), Expect = 6e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|||||||| || | || || ||||||||||| |||||||||||||||| |||| ||
Sbjct 279104 CCTCCTCTCAACCACAGCATAAGATGCAATGTGGACTCCTTTTGGATATTGCAGTCTGAC 279045
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| || || | || |||||||||| |||| | || | ||| |||||||| | ||
Sbjct 279044 AGGGTTCGGCCATCTCCGAGCTGCTTACCGGTAATAATAAGGCGTTGCTGGTCTGGTGGA 278985
Query 46487 ACGCTCTCCTTGTC 46500
| || ||| |||||
Sbjct 278984 ATGCCCTCTTTGTC 278971
>seq15631
Length=58196
Score = 87.8 bits (96), Expect = 2e-12
Identities = 162/238 (68%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418
||||| | || |||| | | ||| |||| ||| | ||| || || || || |||||||
Sbjct 20008 ATTATGTTCCACCTCGAAGTCTCAAAACCAAATGGAGTGTGCTTTCTTTCTGAATATTGT 19949
Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478
| || | | || || || || || ||||| || || |||||||| ||||| || |
Sbjct 19948 AATCACTCAAGGAACGATCATCCTCCAGTTGCTTCCCCGCAAATATCAACCGCTGTTGCT 19889
Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCG 46538
| | || | | ||| || ||| ||||||| || | ||| | || || | |
Sbjct 19888 CTGGAGGTATCCCCTCTTTATCCTGAATCTTCTCTTTCACAGTCATTATGGTTTCTGTAG 19829
Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596
|| | || | |||||| |||||||| ||||||||||| ||||| | |||||| ||
Sbjct 19828 GCTCAGCGTCAATCGTGATCGTTTTGCCTGTCAGCGTTTTCACAAAAAATTGCATCTT 19771
>seq1004
Length=176236
Score = 86.0 bits (94), Expect = 7e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| || ||||| | || ||||| || || |||||||||||| || | ||| |||
Sbjct 108932 CGCAGGACGAGATGGAGGGTGCTCTCTTTCTGAATATTGTAGTCGCTCAGCGAGCGATCG 108873
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| || || ||||| || || || ||||| ||||| || || | ||| | | || ||
Sbjct 108872 TCCTCCAGTTGCTTTCCCGCAAAAATCAACCGCTGTTGATCTGGCGGTATACCTTCTTTA 108813
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558
|| || |||| || | | | | ||||| || ||| | || | ||||||
Sbjct 108812 TCTTGAATTTTCTCTTTTACAGACTTTATAGTGTCTGTCTGTTCAGCTTCGATCGTGATC 108753
Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||||||| |||| ||||| ||||| | ||||||
Sbjct 108752 GTTTTGCCTGTCAATGTTTTCACAAAAAATTGCAT 108718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 564223337815800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |