Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq31184 109 4e-19
seq9166 105 5e-18
seq10606 91.5 1e-13
seq8227 89.7 4e-13
seq23149 87.8 1e-12
seq35418 84.2 2e-11
>seq31184
Length=35399
Score = 109 bits (120), Expect = 4e-19
Identities = 149/204 (73%), Gaps = 3/204 (1%)
Strand=Plus/Minus
Query 39517 TGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGT 39576
|| |||||| |||||||||| ||||||||||| ||| | || | ||| ||||| |||
Sbjct 3335 TGTAAAGTGTTTTCTTTTTGAATATTATAATCATTCAATATCCGATTATCTTCCAACTGT 3276
Query 39577 TTCCCGCCAAAAATTAAACGCTGCTGATCCGAG-GGTACGCCTTCTTTGTCGCATATTTT 39635
|| ||| ||||||| | ||||| | || | | || | |||||||| || ||||
Sbjct 3275 TTGCCGGCAAAAATAAGTCGCTG-TTATACATGTGGAATTCCTTCTTTATCTTGAATTTG 3217
Query 39636 TTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGT 39695
|| ||||| || | | ||||||| || || || | |||||||||||| || ||
Sbjct 3216 TT-TTTAACAGTTTCAATGGTGTCTGTCAGCTCAACATCGATAGTAATTGTTTTCCCAGT 3158
Query 39696 TAAAGTTTTTACGAAGATCTGCAT 39719
|||||||||||| || | ||||||
Sbjct 3157 TAAAGTTTTTACAAATAACTGCAT 3134
>seq9166
Length=72308
Score = 105 bits (116), Expect = 5e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| || | ||| || | || |||||| |||||||||| ||||||||||| |
Sbjct 29273 CCACCTCTCAGTCTCAGAACAAGGTGTAAAGTGTTTTCTTTTTGAATATTATAATCATTC 29332
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
|| | || | ||| ||||| ||||| ||| ||||||| | ||||| || || | ||
Sbjct 29333 AATATCCGATTATCTTCCAACTGTTTGCCGGCAAAAATAAGTCGCTGTTGTTCAGGTGGA 29392
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| |||||||| || |||| || ||||| | | | ||||||| || ||
Sbjct 29393 ATTCCTTCTTTATCTTGAATTTGTTTTTTAACAATTTCAATGGTGTCTGTCGGCTCAACA 29452
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAA 39710
|| | |||||||||||| || |||||||||| || ||
Sbjct 29453 TCGATAGTAATTGTTTTCCCACTTAAAGTTTTCACAAA 29490
>seq10606
Length=61193
Score = 91.5 bits (100), Expect = 1e-13
Identities = 156/225 (69%), Gaps = 1/225 (0%)
Strand=Plus/Minus
Query 39496 CCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAA 39555
|||| || | ||| || | || ||| || |||||||||| |||||||||| |||
Sbjct 46869 CCTCTCAGTCCCAGAACAAGGTGTAAAATGTTTTCTTTTTGATTATTATAATCATTCAAT 46810
Query 39556 ACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACG 39615
| || | ||| || || ||||| ||| ||||||| || ||||| || || | | |
Sbjct 46809 ATCCGATTATCTTCGAACTGTTTGCCGGCAAAAATAAATCGCTGTTGTTCAGGTGAAATT 46750
Query 39616 CCTTCTTTGTCGCATATTT-TTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTC 39674
||||||| || | || ||| ||||| || | | ||||||| || || |
Sbjct 46749 CCTTCTTCATCTTGAACTTGTTTTTTTAACAGTTTCAATGGTGTCTGTCGGCTCAACACC 46690
Query 39675 CAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| |||||||||||| || |||||||||||||| || | |||||
Sbjct 46689 GATAGTAATTGTTTTCCCAGTTAAAGTTTTTACAAATAATTGCAT 46645
>seq8227
Length=99420
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|||||||| | | |||||| ||||| | || || ||||| || ||||| |||||| |
Sbjct 17183 CCGCCTCGAATTCTCAGTACTAAATGGAGTGTACTCTCTTTCTGAATATTGTAATCGTTC 17124
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
||| | || | |||| ||| ||| | |||| ||||| || || ||||| | |||
Sbjct 17123 AAAGATTGATCGCCCTCCAGTTGCTTCTCCGCAAAGATTAACCGTTGTTGATCTGGAGGT 17064
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||||||||||| ||||| | ||| | | | || |||||||| || ||
Sbjct 17063 ATACCTTCTTTGTCTTGAATTTTCTCTTTCACGGACTTTATGATGTCTGCGGGCTCAGCG 17004
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| | || || ||||| || || || ||||| || || | |||||
Sbjct 17003 TCGATCGTGATCGTTTTGCCTGTCAATGTTTTCACAAAAAATTGCAT 16957
>seq23149
Length=43904
Score = 87.8 bits (96), Expect = 1e-12
Identities = 110/151 (73%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| || | || || | ||| |||||| |||||||||| ||||||||||||
Sbjct 19843 CCACCTCTCAGTCTCAAAACAAGATGTAAAGTGTTTTCTTTTTGAATATTATAATCGCTT 19902
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
|| | | ||||| ||||| ||||| || ||||||| | || |||||||| | ||
Sbjct 19903 AATATCCTATCATCCTCCAACTGTTTGCCAGCAAAAATAAGCCGTTGCTGATCGGGTGGA 19962
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAA 39643
| ||||||||||| |||| || |||||
Sbjct 19963 ATTCCTTCTTTGTCTTGAATTTGTTTTTTAA 19993
>seq35418
Length=20192
Score = 84.2 bits (92), Expect = 2e-11
Identities = 109/151 (72%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| || | ||| || | || |||||| |||||||||| ||||||||||| |
Sbjct 11509 CCACCTCTCAGTCTCAGAACAAGGTGTAAAGTGTTTTCTTTTTGAATATTATAATCATTC 11450
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
|| | || | ||| ||||| ||||| ||| ||||||| | || || || || | ||
Sbjct 11449 AATATTCGATTATCCTCCAACTGTTTGCCGGCAAAAATAAGGCGTTGTTGTTCAGGTGGA 11390
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAA 39643
|| |||||||| || |||| || |||||
Sbjct 11389 ACTCCTTCTTTATCTTGAATTTGTTTTTTAA 11359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346761384596945
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |