Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq31184 109 4e-19 seq9166 105 5e-18 seq10606 91.5 1e-13 seq8227 89.7 4e-13 seq23149 87.8 1e-12 seq35418 84.2 2e-11 >seq31184 Length=35399 Score = 109 bits (120), Expect = 4e-19 Identities = 149/204 (73%), Gaps = 3/204 (1%) Strand=Plus/Minus Query 39517 TGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGT 39576 || |||||| |||||||||| ||||||||||| ||| | || | ||| ||||| ||| Sbjct 3335 TGTAAAGTGTTTTCTTTTTGAATATTATAATCATTCAATATCCGATTATCTTCCAACTGT 3276 Query 39577 TTCCCGCCAAAAATTAAACGCTGCTGATCCGAG-GGTACGCCTTCTTTGTCGCATATTTT 39635 || ||| ||||||| | ||||| | || | | || | |||||||| || |||| Sbjct 3275 TTGCCGGCAAAAATAAGTCGCTG-TTATACATGTGGAATTCCTTCTTTATCTTGAATTTG 3217 Query 39636 TTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGT 39695 || ||||| || | | ||||||| || || || | |||||||||||| || || Sbjct 3216 TT-TTTAACAGTTTCAATGGTGTCTGTCAGCTCAACATCGATAGTAATTGTTTTCCCAGT 3158 Query 39696 TAAAGTTTTTACGAAGATCTGCAT 39719 |||||||||||| || | |||||| Sbjct 3157 TAAAGTTTTTACAAATAACTGCAT 3134 >seq9166 Length=72308 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| || | ||| || | || |||||| |||||||||| ||||||||||| | Sbjct 29273 CCACCTCTCAGTCTCAGAACAAGGTGTAAAGTGTTTTCTTTTTGAATATTATAATCATTC 29332 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || | || | ||| ||||| ||||| ||| ||||||| | ||||| || || | || Sbjct 29333 AATATCCGATTATCTTCCAACTGTTTGCCGGCAAAAATAAGTCGCTGTTGTTCAGGTGGA 29392 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | |||||||| || |||| || ||||| | | | ||||||| || || Sbjct 29393 ATTCCTTCTTTATCTTGAATTTGTTTTTTAACAATTTCAATGGTGTCTGTCGGCTCAACA 29452 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAA 39710 || | |||||||||||| || |||||||||| || || Sbjct 29453 TCGATAGTAATTGTTTTCCCACTTAAAGTTTTCACAAA 29490 >seq10606 Length=61193 Score = 91.5 bits (100), Expect = 1e-13 Identities = 156/225 (69%), Gaps = 1/225 (0%) Strand=Plus/Minus Query 39496 CCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAA 39555 |||| || | ||| || | || ||| || |||||||||| |||||||||| ||| Sbjct 46869 CCTCTCAGTCCCAGAACAAGGTGTAAAATGTTTTCTTTTTGATTATTATAATCATTCAAT 46810 Query 39556 ACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACG 39615 | || | ||| || || ||||| ||| ||||||| || ||||| || || | | | Sbjct 46809 ATCCGATTATCTTCGAACTGTTTGCCGGCAAAAATAAATCGCTGTTGTTCAGGTGAAATT 46750 Query 39616 CCTTCTTTGTCGCATATTT-TTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTC 39674 ||||||| || | || ||| ||||| || | | ||||||| || || | Sbjct 46749 CCTTCTTCATCTTGAACTTGTTTTTTTAACAGTTTCAATGGTGTCTGTCGGCTCAACACC 46690 Query 39675 CAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | |||||||||||| || |||||||||||||| || | ||||| Sbjct 46689 GATAGTAATTGTTTTCCCAGTTAAAGTTTTTACAAATAATTGCAT 46645 >seq8227 Length=99420 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 |||||||| | | |||||| ||||| | || || ||||| || ||||| |||||| | Sbjct 17183 CCGCCTCGAATTCTCAGTACTAAATGGAGTGTACTCTCTTTCTGAATATTGTAATCGTTC 17124 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 ||| | || | |||| ||| ||| | |||| ||||| || || ||||| | ||| Sbjct 17123 AAAGATTGATCGCCCTCCAGTTGCTTCTCCGCAAAGATTAACCGTTGTTGATCTGGAGGT 17064 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | ||||||||||| ||||| | ||| | | | || |||||||| || || Sbjct 17063 ATACCTTCTTTGTCTTGAATTTTCTCTTTCACGGACTTTATGATGTCTGCGGGCTCAGCG 17004 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || | || || ||||| || || || ||||| || || | ||||| Sbjct 17003 TCGATCGTGATCGTTTTGCCTGTCAATGTTTTCACAAAAAATTGCAT 16957 >seq23149 Length=43904 Score = 87.8 bits (96), Expect = 1e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| || | || || | ||| |||||| |||||||||| |||||||||||| Sbjct 19843 CCACCTCTCAGTCTCAAAACAAGATGTAAAGTGTTTTCTTTTTGAATATTATAATCGCTT 19902 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || | | ||||| ||||| ||||| || ||||||| | || |||||||| | || Sbjct 19903 AATATCCTATCATCCTCCAACTGTTTGCCAGCAAAAATAAGCCGTTGCTGATCGGGTGGA 19962 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAA 39643 | ||||||||||| |||| || ||||| Sbjct 19963 ATTCCTTCTTTGTCTTGAATTTGTTTTTTAA 19993 >seq35418 Length=20192 Score = 84.2 bits (92), Expect = 2e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| || | ||| || | || |||||| |||||||||| ||||||||||| | Sbjct 11509 CCACCTCTCAGTCTCAGAACAAGGTGTAAAGTGTTTTCTTTTTGAATATTATAATCATTC 11450 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || | || | ||| ||||| ||||| ||| ||||||| | || || || || | || Sbjct 11449 AATATTCGATTATCCTCCAACTGTTTGCCGGCAAAAATAAGGCGTTGTTGTTCAGGTGGA 11390 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAA 39643 || |||||||| || |||| || ||||| Sbjct 11389 ACTCCTTCTTTATCTTGAATTTGTTTTTTAA 11359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346761384596945