Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq5901 100 3e-16 seq62528 95.1 1e-14 seq32158 86.0 7e-12 seq15708 84.2 3e-11 seq1004 82.4 9e-11 >seq5901 Length=104132 Score = 100 bits (110), Expect = 3e-16 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAG--CAAAGTCCAGGCATGAGTC 119565 || || ||||| || ||| ||||| ||| || ||||| |||| || |||| || | Sbjct 20804 TGGAGGCCTTCGTCTCGACTGATGAACTCGTTGCTGAACGTCAAA--CCGGGCAGCAGCC 20861 Query 119566 CTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACAC 119625 |||| ||||| ||||| |||||||| || ||| || ||||| | ||| ||||| Sbjct 20862 CTCTCTTCTTGAGCCAGAAGATGGCTGCGAACGATCCCGAGAAGAACACGCCTTCCACTA 20921 Query 119626 AGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAA-CCACTTGAGAGCC 119684 ||||||||||| ||||| || || | || |||| | | |||| ||| ||||||||| Sbjct 20922 TGGCGAAAGCGAGCAGACGTTC-GCCGAGGGACGAGTCGGGCCGAATCCAGTTGAGAGCC 20980 Query 119685 CAGTTGGCCTTACGCTC-TATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734 || | ||||| | || | |||||||| |||| ||||| || || || Sbjct 20981 CATTCTGCCTT-CTTTCGAACGCAGGGGAACGTTTCAATGGCGTCAAACAG 21030 >seq62528 Length=8633 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/185 (72%), Gaps = 4/185 (2%) Strand=Plus/Plus Query 110284 AGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTC--CAAAA 110341 || || | |||||| | ||||| |||||| | || ||| | || ||| | || | Sbjct 3976 AGGGCCAAAGACGCTAAATTGCGCACAGACGCTTCTTCT--GGCGAACTATACTGCACGA 4033 Query 110342 TTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGT 110401 |||||| || | ||| | | | ||| |||||||| |||| || ||||||| || Sbjct 4034 TTTCCGAGCAGAGATTGCTGCACGTGATGGTACCCAAGTGACTCTGGTTGGATTTGGCGT 4093 Query 110402 TGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGG 110461 |||| || ||||| ||||||||||| || || || |||||| | || || |||||||||| Sbjct 4094 TGCACGCGTCCTTGTAGAGCATGTACGGCGTTCCCGTTTCCATTTGCGATTTGAGAATGG 4153 Query 110462 CCTTC 110466 | ||| Sbjct 4154 CTTTC 4158 >seq32158 Length=25638 Score = 86.0 bits (94), Expect = 7e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 110385 CTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGT 110444 ||| || ||||||| |||||| | ||||| ||||||||||| || || || |||||||| Sbjct 6433 CTGGTTGGATTTGGCGTTGCACGTGTCCTTGTAGAGCATGTACGGTGTTCCCGTTTCCGT 6492 Query 110445 CTGTGACTTGAGAATGGCCTTCCATAC 110471 || || ||||||||||| ||||| || Sbjct 6493 TTGCGATTTGAGAATGGCATTCCACAC 6519 >seq15708 Length=44177 Score = 84.2 bits (92), Expect = 3e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAG 109467 || || || ||||| ||||| ||||| || |||||| |||| | ||||| | Sbjct 33829 CGGAGGTAGTACATGCCCGTCTTGAGTCCTAACTTCCAACCGTAAAAGTGCATGCTCGTC 33888 Query 109468 AGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAAT 109527 ||||||| ||||| | |||| ||| ||||||||||||| ||||||||| ||| Sbjct 33889 AGTTTGGCTTCGCTCGGATCCGCCATGTACACGTTCATCGACTGACTCTGATCGATAAAT 33948 Query 109528 CGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGT 109583 |||| ||||| |||||||| | | | |||||| ||||||||| || || Sbjct 33949 GGACCGCGATCGGCCGCCATCTTCAGCAGCGTCTTTTGCGGAATTTCCCACACGGT 34004 >seq1004 Length=176236 Score = 82.4 bits (90), Expect = 9e-11 Identities = 126/177 (71%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAG 109467 || || || ||||| ||||| ||||| || |||||| |||| | ||||| | Sbjct 32077 CGGAGGTAGTACATGCCCGTCTTGAGTCCCAACTTCCAACCGTAAAAGTGCATGCTCGTC 32018 Query 109468 AGTTTGGAAAGTGTCGGACTCT-CCATAAACAAGTTCATCGACTGAGACTGATCGATGAA 109526 ||||||| ||||| ||| |||| ||| ||||||||||||| ||||||||| || Sbjct 32017 AGTTTGGCTTCGCTCGGA-TCTGCCATGTACATGTTCATCGACTGACTCTGATCGATAAA 31959 Query 109527 TCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGT 109583 | |||| ||||| |||||||| | | | |||||| ||||||||| || || Sbjct 31958 TGGACCGCGATCGGCCGCCATCTTCAGTAGCGTCTTTTGCGGAATTTCCCACACGGT 31902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587918309537000