Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq5901 100 3e-16
seq62528 95.1 1e-14
seq32158 86.0 7e-12
seq15708 84.2 3e-11
seq1004 82.4 9e-11
>seq5901
Length=104132
Score = 100 bits (110), Expect = 3e-16
Identities = 165/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAG--CAAAGTCCAGGCATGAGTC 119565
|| || ||||| || ||| ||||| ||| || ||||| |||| || |||| || |
Sbjct 20804 TGGAGGCCTTCGTCTCGACTGATGAACTCGTTGCTGAACGTCAAA--CCGGGCAGCAGCC 20861
Query 119566 CTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACAC 119625
|||| ||||| ||||| |||||||| || ||| || ||||| | ||| |||||
Sbjct 20862 CTCTCTTCTTGAGCCAGAAGATGGCTGCGAACGATCCCGAGAAGAACACGCCTTCCACTA 20921
Query 119626 AGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAA-CCACTTGAGAGCC 119684
||||||||||| ||||| || || | || |||| | | |||| ||| |||||||||
Sbjct 20922 TGGCGAAAGCGAGCAGACGTTC-GCCGAGGGACGAGTCGGGCCGAATCCAGTTGAGAGCC 20980
Query 119685 CAGTTGGCCTTACGCTC-TATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734
|| | ||||| | || | |||||||| |||| ||||| || || ||
Sbjct 20981 CATTCTGCCTT-CTTTCGAACGCAGGGGAACGTTTCAATGGCGTCAAACAG 21030
>seq62528
Length=8633
Score = 95.1 bits (104), Expect = 1e-14
Identities = 133/185 (72%), Gaps = 4/185 (2%)
Strand=Plus/Plus
Query 110284 AGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTC--CAAAA 110341
|| || | |||||| | ||||| |||||| | || ||| | || ||| | || |
Sbjct 3976 AGGGCCAAAGACGCTAAATTGCGCACAGACGCTTCTTCT--GGCGAACTATACTGCACGA 4033
Query 110342 TTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGT 110401
|||||| || | ||| | | | ||| |||||||| |||| || ||||||| ||
Sbjct 4034 TTTCCGAGCAGAGATTGCTGCACGTGATGGTACCCAAGTGACTCTGGTTGGATTTGGCGT 4093
Query 110402 TGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGG 110461
|||| || ||||| ||||||||||| || || || |||||| | || || ||||||||||
Sbjct 4094 TGCACGCGTCCTTGTAGAGCATGTACGGCGTTCCCGTTTCCATTTGCGATTTGAGAATGG 4153
Query 110462 CCTTC 110466
| |||
Sbjct 4154 CTTTC 4158
>seq32158
Length=25638
Score = 86.0 bits (94), Expect = 7e-12
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 110385 CTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGT 110444
||| || ||||||| |||||| | ||||| ||||||||||| || || || ||||||||
Sbjct 6433 CTGGTTGGATTTGGCGTTGCACGTGTCCTTGTAGAGCATGTACGGTGTTCCCGTTTCCGT 6492
Query 110445 CTGTGACTTGAGAATGGCCTTCCATAC 110471
|| || ||||||||||| ||||| ||
Sbjct 6493 TTGCGATTTGAGAATGGCATTCCACAC 6519
>seq15708
Length=44177
Score = 84.2 bits (92), Expect = 3e-11
Identities = 124/176 (70%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAG 109467
|| || || ||||| ||||| ||||| || |||||| |||| | ||||| |
Sbjct 33829 CGGAGGTAGTACATGCCCGTCTTGAGTCCTAACTTCCAACCGTAAAAGTGCATGCTCGTC 33888
Query 109468 AGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAAT 109527
||||||| ||||| | |||| ||| ||||||||||||| ||||||||| |||
Sbjct 33889 AGTTTGGCTTCGCTCGGATCCGCCATGTACACGTTCATCGACTGACTCTGATCGATAAAT 33948
Query 109528 CGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGT 109583
|||| ||||| |||||||| | | | |||||| ||||||||| || ||
Sbjct 33949 GGACCGCGATCGGCCGCCATCTTCAGCAGCGTCTTTTGCGGAATTTCCCACACGGT 34004
>seq1004
Length=176236
Score = 82.4 bits (90), Expect = 9e-11
Identities = 126/177 (71%), Gaps = 2/177 (1%)
Strand=Plus/Minus
Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAG 109467
|| || || ||||| ||||| ||||| || |||||| |||| | ||||| |
Sbjct 32077 CGGAGGTAGTACATGCCCGTCTTGAGTCCCAACTTCCAACCGTAAAAGTGCATGCTCGTC 32018
Query 109468 AGTTTGGAAAGTGTCGGACTCT-CCATAAACAAGTTCATCGACTGAGACTGATCGATGAA 109526
||||||| ||||| ||| |||| ||| ||||||||||||| ||||||||| ||
Sbjct 32017 AGTTTGGCTTCGCTCGGA-TCTGCCATGTACATGTTCATCGACTGACTCTGATCGATAAA 31959
Query 109527 TCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGT 109583
| |||| ||||| |||||||| | | | |||||| ||||||||| || ||
Sbjct 31958 TGGACCGCGATCGGCCGCCATCTTCAGTAGCGTCTTTTGCGGAATTTCCCACACGGT 31902
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 587918309537000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |