Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq31000 95.1 1e-14 seq1013 89.7 6e-13 seq2243 87.8 2e-12 >seq31000 Length=33412 Score = 95.1 bits (104), Expect = 1e-14 Identities = 137/191 (72%), Gaps = 7/191 (4%) Strand=Plus/Plus Query 106460 AGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATT 106519 ||||| | || |||||||||||||| |||||||||||| |||||| | |||| Sbjct 21723 AGGGCTAAAGACGCCAAATTGCAAACGGCCGTCTCATCCGGCGAACTGTACTGCACAATT 21782 Query 106520 TCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG--- 106576 |||| || | || || | | || || ||||| | ||||| | |||| Sbjct 21783 TCTGAGCAGAGATTACTACACGTGATGGTGCCCAAGTGACGCTGGTT---CGATTTGGCA 21839 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 |||||||| | |||||||||||||| ||||| ||||| ||| | || || |||||||| Sbjct 21840 TTGCACGCGAC-TTGTAGAGCATGTACGGCGTTCCCGTTTCCATTTGCGATTTGAGAATG 21898 Query 106637 GCCTTCCACAC 106647 || |||||||| Sbjct 21899 GCTTTCCACAC 21909 >seq1013 Length=399926 Score = 89.7 bits (98), Expect = 6e-13 Identities = 249/380 (66%), Gaps = 18/380 (5%) Strand=Plus/Minus Query 9186 ATCTTACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTC 9245 |||| || ||||| ||||| || | ||| || || ||| | || ||| || || Sbjct 291087 ATCTGCCGGTCAAAACGACCAGGCCTAAGCAGTGCTGGATCTAAGACATCCGGACGGTTA 291028 Query 9246 GTCGCGGCGATGACAACAATACCTGTTTCATTA---TCAAAACCATCCATCTCTGTCAAA 9302 ||||| || || | | | || |||||| ||||| ||||||||||| || Sbjct 291027 GTCGCAGCAATTATTATTACGCCC---TCATTAGACTCAAAGCCATCCATCTCAACTAAT 290971 Query 9303 AGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCAC---TGC-- 9357 | || || | |||||||| | ||||||||| | ||||||| || ||| Sbjct 290970 AACTGATTTAATGTTTGTTCTCTTTCATCATTACC------ACCACCAAGACCAATGCCA 290917 Query 9358 -GTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGG 9416 | || | ||||| ||||| |||||||| || || | ||||| || ||||| | Sbjct 290916 CGATGTCTACCCACCGCATCTATCTCATCTATAAAAATTATACAAGGAGCATTTTTCTTG 290857 Query 9417 GCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAG 9476 | ||||| | ||| ||||| | | || || ||||||||||||||||| ||||| Sbjct 290856 CCTTGATCAAACATATCACGAACACGGCTCGCACCAACACCAACAAACATCTCAACAAAA 290797 Query 9477 TTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGA 9536 | | | ||| | ||| || ||||||| ||| || ||||| || || || || Sbjct 290796 TCAGATCCAGAAATGCTAAAGAATGGTACATTAGCTTCTCCTGCAATTGCACGAGCAAGT 290737 Query 9537 AGAGTCTTACCCGTACCTGG 9556 | ||| ||||| || || || Sbjct 290736 AAAGTTTTACCAGTTCCAGG 290717 >seq2243 Length=133560 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 106562 TGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTC 106621 ||||| |||| ||||||||| ||||||||||||||||| ||||| ||||| |||||| Sbjct 81378 TGGTTGGACTTTGCGTTGCACGCGTCCTTGTAGAGCATGTACGGCGTTCCCGTTTCCGTC 81437 Query 106622 TGTGACTTGAGAATTGCCTTCCACAC 106647 || || ||||| || || ||||| || Sbjct 81438 TGCGATTTGAGGATGGCATTCCAGAC 81463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588921305104600