Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq31000 95.1 1e-14
seq1013 89.7 6e-13
seq2243 87.8 2e-12
>seq31000
Length=33412
Score = 95.1 bits (104), Expect = 1e-14
Identities = 137/191 (72%), Gaps = 7/191 (4%)
Strand=Plus/Plus
Query 106460 AGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATT 106519
||||| | || |||||||||||||| |||||||||||| |||||| | ||||
Sbjct 21723 AGGGCTAAAGACGCCAAATTGCAAACGGCCGTCTCATCCGGCGAACTGTACTGCACAATT 21782
Query 106520 TCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG--- 106576
|||| || | || || | | || || ||||| | ||||| | ||||
Sbjct 21783 TCTGAGCAGAGATTACTACACGTGATGGTGCCCAAGTGACGCTGGTT---CGATTTGGCA 21839
Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636
|||||||| | |||||||||||||| ||||| ||||| ||| | || || ||||||||
Sbjct 21840 TTGCACGCGAC-TTGTAGAGCATGTACGGCGTTCCCGTTTCCATTTGCGATTTGAGAATG 21898
Query 106637 GCCTTCCACAC 106647
|| ||||||||
Sbjct 21899 GCTTTCCACAC 21909
>seq1013
Length=399926
Score = 89.7 bits (98), Expect = 6e-13
Identities = 249/380 (66%), Gaps = 18/380 (5%)
Strand=Plus/Minus
Query 9186 ATCTTACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTC 9245
|||| || ||||| ||||| || | ||| || || ||| | || ||| || ||
Sbjct 291087 ATCTGCCGGTCAAAACGACCAGGCCTAAGCAGTGCTGGATCTAAGACATCCGGACGGTTA 291028
Query 9246 GTCGCGGCGATGACAACAATACCTGTTTCATTA---TCAAAACCATCCATCTCTGTCAAA 9302
||||| || || | | | || |||||| ||||| ||||||||||| ||
Sbjct 291027 GTCGCAGCAATTATTATTACGCCC---TCATTAGACTCAAAGCCATCCATCTCAACTAAT 290971
Query 9303 AGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCAC---TGC-- 9357
| || || | |||||||| | ||||||||| | ||||||| || |||
Sbjct 290970 AACTGATTTAATGTTTGTTCTCTTTCATCATTACC------ACCACCAAGACCAATGCCA 290917
Query 9358 -GTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGG 9416
| || | ||||| ||||| |||||||| || || | ||||| || ||||| |
Sbjct 290916 CGATGTCTACCCACCGCATCTATCTCATCTATAAAAATTATACAAGGAGCATTTTTCTTG 290857
Query 9417 GCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAG 9476
| ||||| | ||| ||||| | | || || ||||||||||||||||| |||||
Sbjct 290856 CCTTGATCAAACATATCACGAACACGGCTCGCACCAACACCAACAAACATCTCAACAAAA 290797
Query 9477 TTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGA 9536
| | | ||| | ||| || ||||||| ||| || ||||| || || || ||
Sbjct 290796 TCAGATCCAGAAATGCTAAAGAATGGTACATTAGCTTCTCCTGCAATTGCACGAGCAAGT 290737
Query 9537 AGAGTCTTACCCGTACCTGG 9556
| ||| ||||| || || ||
Sbjct 290736 AAAGTTTTACCAGTTCCAGG 290717
>seq2243
Length=133560
Score = 87.8 bits (96), Expect = 2e-12
Identities = 71/86 (83%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 106562 TGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTC 106621
||||| |||| ||||||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct 81378 TGGTTGGACTTTGCGTTGCACGCGTCCTTGTAGAGCATGTACGGCGTTCCCGTTTCCGTC 81437
Query 106622 TGTGACTTGAGAATTGCCTTCCACAC 106647
|| || ||||| || || ||||| ||
Sbjct 81438 TGCGATTTGAGGATGGCATTCCAGAC 81463
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588921305104600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |