Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq56889 116 2e-21 seq15631 107 1e-18 seq13072 89.7 3e-13 >seq56889 Length=12386 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||| | | ||| |||| || | || ||||||||| ||||| || || ||| Sbjct 6060 CCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAA 6119 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| ||||||||||| || ||||| |||| || ||||||||| | || Sbjct 6120 AGCGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGG 6179 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || || ||||| || || || ||| | | || | |||| || || || Sbjct 6180 ATACCTTCTTTGTCTTGGATTTTTGCCTTTACGTTTTCAATGGTGTCACTGGGTTCCACT 6239 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | || ||||| || |||||||| |||||||||||||||||||| Sbjct 6240 TCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 6286 Score = 114 bits (126), Expect = 8e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||| | | ||| |||| || | || ||||||||| ||||| || || ||| Sbjct 6516 CCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAA 6575 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| ||||||||||| || || || |||| || ||||||||| | || Sbjct 6576 AGAGTGCGGCCATCTTCCAGCTGTTTGCCAGCGAAAATTAAACGCTGCTGGTCTGGTGGG 6635 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || || ||||| || || || ||| | | || | |||| || ||| || Sbjct 6636 ATACCTTCTTTGTCTTGGATTTTTGCCTTCACGTTTTCAATGGTGTCACTGGGCTCTACT 6695 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || ||||| || |||||||| ||||| ||||||||||||||| Sbjct 6696 TCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTTACAAAGATCTGCATA 6743 Score = 113 bits (124), Expect = 3e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || || ||||||||||||||||| | |||| ||||||||| ||||| ||||| || Sbjct 2967 CCACCTCTTAACCTCAAAACCAAGTGCAATGTGGATTCTTTCTGTATGTTGTAGTCTGAC 3026 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || |||| |||| || | ||| || || ||||| || || |||||||||||| | || Sbjct 3027 AGTGTTCGGCCATCTTCTAACTGCTTGCCTGCAAAAATAAGACGTTGCTGGTCTGGAGGA 3086 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || || ||||| || || ||| ||| | || | |||| || ||||| Sbjct 3087 ATACCTTCTTTGTCTTGTATTTTTGCTTTCACGTTCTCGATAGTGTCACTGGGTTCAACC 3146 Query 34935 TCGACGGTTATGGTTTTTCC 34954 || | |||||||||||| || Sbjct 3147 TCCAAGGTTATGGTTTTGCC 3166 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| ||||||| || || | || | |||| |||||||| || || ||||| || Sbjct 5604 CCTCCTCTCAACCGCAGCACAAGATGCAATGTGGACTCTTTCTGGATATTGTAGTCGGAC 5663 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| |||| |||| || || || || || ||||| || || |||||||||||| | || Sbjct 5664 AGGGTTCGGCCATCTTCAAGTTGCTTACCAGCAAAAATAAGACGTTGCTGGTCTGGGGGA 5723 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||| ||||| ||| || ||||| | | || | |||| || || || Sbjct 5724 ATGCCCTCTTTGTCCTGAATTTTTGCCTTGACATTTTCAATTGTATCACTGGGTTCCACT 5783 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | |||||||| || || || | |||||| ||||| |||||||| Sbjct 5784 TCAAGTGTTATGGTCTTCCCTGTTAAAGTCTTGACAAAAATCTGCAT 5830 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 |||||| ||||||||||||||||||||| | || |||| || | ||| ||||| ||||| Sbjct 5867 TTCTTTTTGAATGTTATAGTCCGAAAGGGTACGACCATCTTCTAACTGCTTTCCAGCAAA 5926 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || ||||||||| | || | || || ||||| ||||| ||||| Sbjct 5927 AATCAGACGCTGCTGGTCTGGTGGGATACCTTCTTTGTCTTGGATCTTTGCCTTGACATT 5986 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | |||| | ||||| || | || || ||||| || || | ||||| || Sbjct 5987 TTCGATAGTGTCACTTGGTTCAACTTCAAGAGTGATTGTTTTCCCAGTCAATGTCTTAAC 6046 Query 34970 AAAGATCTGCAT 34981 ||| |||||||| Sbjct 6047 AAAAATCTGCAT 6058 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| || | |||||| || | ||| | || |||||| |||||||||||||| ||| Sbjct 6288 CCTCCTCTAAGCCTCAACACAAGGTGCAAGGTAGATTCTTTTTGAATGTTATAGTCTGAA 6347 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| || | ||| || || ||||| || || ||||||||||| | || Sbjct 6348 AGAGTACGACCATCTTCTAACTGCTTACCAGCAAAAATAAGACGTTGCTGGTCGGGTGGA 6407 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || |||||||| ||||| ||||| | | || | |||| | ||||| Sbjct 6408 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTTGGTTCAACT 6467 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | || || ||||| || || | ||||| || || |||||||| Sbjct 6468 TCAAGAGTGATTGTTTTCCCAGTCAATGTCTTGACGAAAATCTGCAT 6514 Score = 84.2 bits (92), Expect = 1e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 34797 TGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGT 34856 || |||||||||||||| | | | |||| || | ||| || || ||||| || || Sbjct 5418 TGGATGTTATAGTCCGACAAAGTCCTGCCATCCTCTAACTGCTTACCAGCAAAGATAAGA 5477 Query 34857 CGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATC 34916 || || |||||| | || | || || ||||| ||| || |||||| |||| Sbjct 5478 CGCTGTTGGTCTGGGGGAATGCCTTCTTTGTCCTGAATTTTTGCCTTGACGTTCTCTATT 5537 Query 34917 GATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATC 34976 | |||| | ||||||||| | ||| || || || || || | ||||||||||| ||| Sbjct 5538 GTATCACTTGACTCAACATCCAAGGTAATTGTCTTCCCAGTCAATGTCTTCACAAAAATC 5597 Query 34977 TGCATA 34982 |||||| Sbjct 5598 TGCATA 5603 >seq15631 Length=58196 Score = 107 bits (118), Expect = 1e-18 Identities = 158/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC-CGAAAGGCTTCGTTC 34825 ||||||||||| || | |||||||||||||||||| || || || | |||| || || Sbjct 19988 CTCAAAACCAAATGGAGTGTGCTTTCTTTCTGAATATTGTAATCACTCAAGG-AACGATC 19930 Query 34826 ATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34885 ||| ||||| || || || |||||||| | || || || ||| | || | |||||| || Sbjct 19929 ATCCTCCAGTTGCTTCCCCGCAAATATCAACCGCTGTTGCTCTGGAGGTATCCCCTCTTT 19870 Query 34886 GTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTAT 34945 || |||||||| ||| || | ||| | ||| | |||| | || | || || Sbjct 19869 ATCCTGAATCTTCTCTTTCACAGTCATTATGGTTTCTGTAGGCTCAGCGTCAATCGTGAT 19810 Query 34946 GGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTCG 34986 ||||| || || || || |||||||| | ||||| |||| Sbjct 19809 CGTTTTGCCTGTCAGCGTTTTCACAAAAAATTGCATCTTCG 19769 >seq13072 Length=78421 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/222 (70%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC-CGAAAGGCTTCGTTC 34825 |||| ||| || || | |||||||||||||||||| || || || | |||| || || Sbjct 53549 CTCAGAACAAAATGGAGTGTGCTTTCTTTCTGAATATTGTAATCGCTCAAGG-AACGATC 53607 Query 34826 ATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34885 ||| ||||| || || || |||||||| | || || || ||| |||| | ||| || || Sbjct 53608 ATCCTCCAGTTGCTTCCCCGCAAATATCAACCGCTGTTGCTCTGGCGGTATCCCTTCTTT 53667 Query 34886 GTCGCTAATCTTCTGTTTGACGGATGCTATCG-ATTCACCGGCCTCAACATCGACGGTTA 34944 || |||||||| ||| || | ||| | ||| | || |||| | |||| || | Sbjct 53668 ATCCTGAATCTTCTCTTTCACAGTCATTATGGTGTTCGCAGG-CTCAGCGTCGATCGTGA 53726 Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTCG 34986 | |||| || || || |||||||| | ||||| |||| Sbjct 53727 TCCTTTTCATTGTCAGCGTTTTCACAAAAAAATGCATCTTCG 53768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324065193450120