Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq454 118 9e-22 >seq454 Length=212681 Score = 118 bits (130), Expect = 9e-22 Identities = 263/394 (67%), Gaps = 8/394 (2%) Strand=Plus/Minus Query 29829 GTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCAT 29888 |||||| || || | ||||||||||| ||||| |||| || | ||||| || || || Sbjct 93004 GTGAGCATCCCCTAATGTGTGGACAAAATCTCCAGGTTTGAGGTCAGTGACATGTGCGAT 92945 Query 29889 CATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCC 29948 ||||| || | || | ||||| || |||||||| ||||| || | ||||| || || Sbjct 92944 CATGTGTGTCAAAAGGGCATAGCTAGCAATGTTAAATGGTACACCTAAACCCATATCGCC 92885 Query 29949 CGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTG----ACACA 30004 ||||| ||||| | ||||| || || || || | ||||| |||||||| | ||| Sbjct 92884 AGACCTTTGGTACAATTGACATGATAGTTCGCCATTACTCACATAAAACTGGGCTAAACA 92825 Query 30005 TGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGA 30064 ||| || || || ||| |||| | | || | |||||| | |||| | Sbjct 92824 ----GTGACAAGGGGGGAGAACCATTTTGGGTATATCAAGTGCGTTCCAAGAACACAAAA 92769 Query 30065 TGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCA 30124 | || | | || | || || | | ||||| | | | ||| || |||||| | Sbjct 92768 TTATTCTTCGATCATTAGGATTTTCCTTGATGGCCTTAATCACATTTGCCAACTGATCAA 92709 Query 30125 CCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACT 30184 | || || | ||||||||| |||| | | |||| || || ||||| | ||||| Sbjct 92708 CTCCTTGACCTGTGTAGTCTGCTTTCATATGAGAATACTGAGCCCCAAAATGTCGCCACT 92649 Query 30185 GGAACCCGTACACCGGTCCCAGGTCTCCCTCTTC 30218 | ||||| ||||| || || || || || ||||| Sbjct 92648 GAAACCCATACACTGGACCTAGATCACCTTCTTC 92615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 407902144421045