Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq454 118 9e-22
>seq454
Length=212681
Score = 118 bits (130), Expect = 9e-22
Identities = 263/394 (67%), Gaps = 8/394 (2%)
Strand=Plus/Minus
Query 29829 GTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCAT 29888
|||||| || || | ||||||||||| ||||| |||| || | ||||| || || ||
Sbjct 93004 GTGAGCATCCCCTAATGTGTGGACAAAATCTCCAGGTTTGAGGTCAGTGACATGTGCGAT 92945
Query 29889 CATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCC 29948
||||| || | || | ||||| || |||||||| ||||| || | ||||| || ||
Sbjct 92944 CATGTGTGTCAAAAGGGCATAGCTAGCAATGTTAAATGGTACACCTAAACCCATATCGCC 92885
Query 29949 CGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTG----ACACA 30004
||||| ||||| | ||||| || || || || | ||||| |||||||| | |||
Sbjct 92884 AGACCTTTGGTACAATTGACATGATAGTTCGCCATTACTCACATAAAACTGGGCTAAACA 92825
Query 30005 TGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGA 30064
||| || || || ||| |||| | | || | |||||| | |||| |
Sbjct 92824 ----GTGACAAGGGGGGAGAACCATTTTGGGTATATCAAGTGCGTTCCAAGAACACAAAA 92769
Query 30065 TGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCA 30124
| || | | || | || || | | ||||| | | | ||| || |||||| |
Sbjct 92768 TTATTCTTCGATCATTAGGATTTTCCTTGATGGCCTTAATCACATTTGCCAACTGATCAA 92709
Query 30125 CCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACT 30184
| || || | ||||||||| |||| | | |||| || || ||||| | |||||
Sbjct 92708 CTCCTTGACCTGTGTAGTCTGCTTTCATATGAGAATACTGAGCCCCAAAATGTCGCCACT 92649
Query 30185 GGAACCCGTACACCGGTCCCAGGTCTCCCTCTTC 30218
| ||||| ||||| || || || || || |||||
Sbjct 92648 GAAACCCATACACTGGACCTAGATCACCTTCTTC 92615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 407902144421045
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |