Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq7405 140 6e-28 seq5901 127 4e-24 seq23158 116 7e-21 seq12999 95.1 2e-14 seq20435 93.3 8e-14 seq2243 93.3 8e-14 seq52744 86.0 1e-11 seq28800 84.2 4e-11 >seq7405 Length=74570 Score = 140 bits (154), Expect = 6e-28 Identities = 475/731 (65%), Gaps = 22/731 (3%) Strand=Plus/Minus Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012 ||||| ||| || |||||| | || ||||| | ||| || | | |||||||||| || Sbjct 57272 CAGCAAGTGGTCGGCGACGAATTCAATGTACTGCTTCATCAGCGCGCTGTTCATGCCAAT 57213 Query 48013 GAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072 |||| ||||| ||||| | |||||| || | || | |||| |||||| | | Sbjct 57212 CAGGGCGACGGGTAAAGCTTCCAGGAGAAATTCTTGTTCGAGTTGCAGGGCTTCGGCAAA 57153 Query 48073 AATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGT-GCTTGGCATAGAGCATGC 48131 | |||| ||||||| | ||| |||| | ||||| || | | | |||| || Sbjct 57152 AGTCTGACGGACGCGGGCCGGATCGGGCTTGTGGGCCAGGTAGCGAGTGA-ACAGCAAGC 57094 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 | || || | | ||| ||| ||||| || ||||||| ||||| ||| | || Sbjct 57093 AAGCGAAATTGCAGTGGGTGCCCTCGTCTCGATTGATGAGTTCGTTGCTGAACGTCAAAC 57034 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 | |||| | ||| |||| |||||||||||| | || ||||| || || |||||||| | Sbjct 57033 CGGGCAGCAGCCCTCTCTTCTTGAGCCAGAAAGTGGCTGCGAACGATCCCGAGAAGAACA 56974 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311 ||| |||||| ||||| ||| || | || | || || ||| | | || | Sbjct 56973 CGCCTTCCACTATGGCGAAAGCGAGCAGGCGTTCGCAGAGGGA--CGTCTCAGGCCGA-A 56917 Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGA 48371 ||||| || ||||| ||||| ||||| | ||| || | || || |||| || Sbjct 56916 TCCAGTTCAGAGCCCATTCTGCTTTCTTTCGAACGCAGGGGAATGTTTCGATGG---GGT 56860 Query 48372 AGAGCTTCTTGCACTCACCT---GCGTCCGCAACATAGGT---AGTGAGC-AGCTTTGCG 48424 |||| | || || | | ||| |||| || || ||||| |||| | Sbjct 56859 CGAGCAAGTCGCGTTCCTGTTTCGGGTCGGCAATGTACGTGTCGATGAGCAAGCT----G 56804 Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 ||||| || || || | ||||| || || || || || ||||| ||| | || || Sbjct 56803 TACATTTCCGAATGAATGTTCTCCATGGCAATTTGAAATCCGTAAAAGCATCGCGCTTCG 56744 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544 | ||| ||||| ||| | | | || | ||| || ||||| || || || Sbjct 56743 GGTAACTGGACTTCCTGACCGAACCGCGCGAGTAAATTTTCGTTGACGATACCGTCGCTG 56684 Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA---GAGCA 48601 || || |||||||| | ||| ||| | |||||| ||| | | | || | | || Sbjct 56683 GCGGCGAAGAAGGCTAAGACGTGTGCGATGAAATGTTTCTCTTGGGGTGTCAAACGCTCA 56624 Query 48602 TTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGT 48661 | |||| | ||| |||||| || || ||||| || || ||||| |||||||||| Sbjct 56623 TCCCAGTCGCGTAAATCTTTGGACAAATCGACTTCCTCGACGGTCCAAAAGGACGCGACG 56564 Query 48662 GCTTTTTTGTA 48672 ||||| ||||| Sbjct 56563 GCTTTCTTGTA 56553 >seq5901 Length=104132 Score = 127 bits (140), Expect = 4e-24 Identities = 280/415 (67%), Gaps = 5/415 (1%) Strand=Plus/Plus Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012 ||||| || || |||||| | || ||||| | ||| | | | | |||||||| || Sbjct 20611 CAGCAAATGGTCGGCGACGAATTCAATGTACTGCTTCATCAAAGCGCTATTCATGCCAAT 20670 Query 48013 GAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072 ||||| ||||||| ||| | |||||| || | || | ||||||||||| | Sbjct 20671 CAGGGAGACGGGCAGAGCTTCCAGGAGAAATTCTTGTTCGAGTTGCACGGCTTCGGTAAA 20730 Query 48073 AATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGT-GCTTGGCATAGAGCATGC 48131 |||||| ||||| | | ||| |||| ||||| || | | | |||| || Sbjct 20731 AATCTGACAGACGCGTGCCGGATCGGGCTTGTGAGTCAGGTAGCGAGTGA-ACAGCAAGC 20789 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 | || || | | ||| | ||||||||| || ||||||| | ||||| ||| | || Sbjct 20790 AAGCGAAATTGCAGTGGAGGCCTTCGTCTCGACTGATGAACTCGTTGCTGAACGTCAAAC 20849 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 | |||| | ||| |||| ||||||||||| || || ||||| || || |||||||| | Sbjct 20850 CGGGCAGCAGCCCTCTCTTCTTGAGCCAGAAGATGGCTGCGAACGATCCCGAGAAGAACA 20909 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311 ||| |||||| ||||| ||| || | || |||| || | || | | || | Sbjct 20910 CGCCTTCCACTATGGCGAAAGCGAGCAGACGTTCGCCGAGGGACGAGT--CGGGCCGA-A 20966 Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 ||||| || ||||| ||||||||||| | ||| || | ||| || ||||| Sbjct 20967 TCCAGTTGAGAGCCCATTCTGCCTTCTTTCGAACGCAGGGGAACGTTTCAATGGC 21021 >seq23158 Length=28319 Score = 116 bits (128), Expect = 7e-21 Identities = 221/323 (68%), Gaps = 2/323 (1%) Strand=Plus/Minus Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012 ||||| || || ||||| | || ||||| | ||| || | | |||||||||| || Sbjct 5218 CAGCAAATGGTCGGCGACAAATTCAATGTACTGCTTCATCAGCGCGCTGTTCATGCCAAT 5159 Query 48013 GAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072 ||||| ||||||| ||| | |||||| || | || | ||||||| ||| | | Sbjct 5158 CAGGGAGACGGGCAGAGCTTCCAGGAGAAATTCTTGTTCGAGTTGCACGGTTTCGGCAAA 5099 Query 48073 AATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGT-GCTTGGCATAGAGCATGC 48131 ||| || |||||||||| ||| |||| | || || || | | | |||| || Sbjct 5098 AATATGACGGACGCGGGACTGATCGGGCTTGTGGGCCAAGTAGCGAGTGA-ACAGCAAGC 5040 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 | ||||| | | ||| | ||||||||| || |||| ||| ||||| || | || Sbjct 5039 AAGCAAATTTGCAGTGGAGGCCTTCGTCTCGACTGAGGAGTTCGTTGCTTAACGTCAAAC 4980 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 | |||| | ||| |||| ||||||||||| || ||||||| || || ||||| || | Sbjct 4979 CGGGCAGCAGCCCTCTCTTCTTGAGCCAGAAGATGACCGCGAACGATCCCGAGAAAAACA 4920 Query 48252 TGCCCTCCACTGCCGCGAACGCG 48274 || |||||| ||||| ||| Sbjct 4919 CGCTTTCCACTATGGCGAAAGCG 4897 Score = 98.7 bits (108), Expect = 2e-15 Identities = 297/449 (66%), Gaps = 15/449 (3%) Strand=Plus/Plus Query 213186 TCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCC 213245 |||| |||| |||||| ||| | ||||||||||||||| ||| ||||||| || || Sbjct 5453 TCCTCAGCCAACTCGCAACTCGCGTCCAGGGCAGCGTAGTAAATGTTTTCAAAGATGTCT 5512 Query 213246 CTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCA 213305 | |||||||| || || ||| | ||||| | ||| | | ||| | || Sbjct 5513 CGGTTGAGCTGCTGCGCTTCTTCGCTGTCGAAGGCGAGTTTCAGGGAAAGAAACGCTTCC 5572 Query 213306 GCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGAC-TTGGAGCACTC 213364 |||| || || ||||||| |||||| |||| || | || ||| ||| | | || || Sbjct 5573 GCCAATCCTTGCACCCCGACGCCGATCGGTCGATGGCGCATGTTGGACACTCGGGC-TTC 5631 Query 213365 CTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGT 213424 | | |||||| |||| ||||||||| ||||| | |||||| | | || || Sbjct 5632 CGGAACGGGGTACGCGTTGACGTCGATGATTTTGTTCAAGTTGCGAACGACGACACGCGT 5691 Query 213425 GACATGGGCCAGGTACTCGTGATTGAACACG-TAGCCCCCGTCCTGCACAAACTCAG-GC 213482 || | || | ||| || ||| ||| | | ||||| | | | | || | | Sbjct 5692 CACGCGACGCAACTGTTCGAAATCGAA-ACGCTTG---TCGTCC-GTAAAGAATCGGTTC 5746 Query 213483 AGGGCGATGCTGGCCAGGTTGCAAACGGCC---ACCTCCTGAGAGTCTGTGTACTCCATG 213539 ||||| | |||| |||||| |||||| | | | | ||| | || | || | Sbjct 5747 AGGGCCAAAAACGCCAAGTTGCAGACGGCCGTTTCTTTCAGCGAG---CTATATTGCACG 5803 Query 213540 ATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCG 213599 || |||| ||| || ||||| || ||||||||| |||| | ||||| ||||| ||| Sbjct 5804 ATTTCGGAGCAGAGATTGCTTCACGCGATGGTGCCTAGGTGACGCTGGTTGGACTTGGCG 5863 Query 213600 TTGGCAGAATCCTTGTAGAGCATGTAGGG 213628 ||| | |||||||| |||||||| || Sbjct 5864 TTGCACGCGTCCTTGTAAAGCATGTACGG 5892 >seq12999 Length=59618 Score = 95.1 bits (104), Expect = 2e-14 Identities = 210/315 (67%), Gaps = 0/315 (0%) Strand=Plus/Minus Query 47960 TGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGAC 48019 || || ||||| | || || || | | ||| || || ||||||| || || |||| Sbjct 29668 TGGTCGGCGACAAATTCAATATACTGTTTCATCAGCGTACTGTTCATACCGATCAGGGCA 29609 Query 48020 ACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGC 48079 ||||||||||| | | ||| || | || | |||||| ||||| | | |||||| Sbjct 29608 ACGGGCAAAGCTTCCAGTAAAAATTCTTGTTCGAGCTGCACAGCTTCAGCAAAAATCTGA 29549 Query 48080 TTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAG 48139 ||||| | | |||||||| | |||| | | | | || ||||| || Sbjct 29548 CGGACGCGAGCCGAATCGGGTTTGTGGACTAGGTAGCGCGTAAACAACAAACAGGCGAAA 29489 Query 48140 TCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATG 48199 | | ||| | ||||||||| || |||||||| ||||| ||| | ||| || | Sbjct 29488 TTGCAGTGGAGGCCTTCGTCACGACTGATGAGTTCGTTGCTGAACGTCAAACCGGGGAGC 29429 Query 48200 ACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCC 48259 | ||| || | |||||||| ||||| || ||||| || || |||||||| | || ||| Sbjct 29428 AACCCTCTTTTCTTGAGCCAAAAAATGGCTGCGAACGATCCGGAGAAGAAAACACCTTCC 29369 Query 48260 ACTGCCGCGAACGCG 48274 ||| ||||| ||| Sbjct 29368 ACTATGGCGAAAGCG 29354 >seq20435 Length=76492 Score = 93.3 bits (102), Expect = 8e-14 Identities = 198/293 (68%), Gaps = 6/293 (2%) Strand=Plus/Minus Query 47973 ACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCT 48032 |||| ||||| | | ||| || | |||||||||| || |||| ||||| ||||| | Sbjct 19741 ACTCAATGTACTGTTTCATCAGCGCACTGTTCATGCCGATCAGGGCGACGGGTAAAGCTT 19682 Query 48033 TTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACT 48092 | || || | ||| ||||| ||| |||| | | |||||||| || || || Sbjct 19681 CCAATAAAAGTTCTTGCTCGATCTGAACGACTTCGGCAAAAATCTGCTGCACCCG---CT 19625 Query 48093 C-TGAG--GGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCA 48149 | ||| || |||| | ||| | | | | | || |||| |||| | | |||| Sbjct 19624 CCTGATCAGGCTTGTGGACCAGATAGTGAGTGAACAACAAGCAGACAAAATTACAATGCA 19565 Query 48150 AGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCT 48209 |||||||| ||||||||||| ||||| ||| | ||| |||| | || || | Sbjct 19564 GTCCTTCGTCTCGGCTGATGAGTTCGTTGCTGAACGTTAAACCGGGCAGCAAGCCTCTTT 19505 Query 48210 GTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACT 48262 |||||||||||||| || ||||| || || || ||||| | || |||||| Sbjct 19504 TCTTGAGCCAGAAAATGGCTGCGAACGATCCCGAAAAGAAAACACCTTCCACT 19452 >seq2243 Length=133560 Score = 93.3 bits (102), Expect = 8e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 213495 GCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGG 213554 |||| ||||||||||||| || | | | | |||| || ||| |||| ||| || Sbjct 81288 GCCAAGTTGCAAACGGCCGTTTCTTTCGGGGAGCTATACTGCACGATTTCGGAGCAGAGA 81347 Query 213555 TTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTG 213614 |||||||| |||||||||||||| | ||||| |||||||||||| | |||||| Sbjct 81348 TTGCTGCAAGCGATGGTGCCCAGGTGACGCTGGTTGGACTTTGCGTTGCACGCGTCCTTG 81407 Query 213615 TAGAGCATGTAGGG 213628 ||||||||||| || Sbjct 81408 TAGAGCATGTACGG 81421 >seq52744 Length=12040 Score = 86.0 bits (94), Expect = 1e-11 Identities = 184/275 (67%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 48000 TGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCA 48059 ||||||| || || || | ||||||||||| | | ||| || | || | ||||| Sbjct 3004 TGTTCATACCGATCAGAGCAACGGGCAAAGCTTCCAGTAAAAATTCTTGTTCGAGCTGCA 2945 Query 48060 CGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGG 48119 | ||||| | | |||||| |||||| | | |||||||| | | || | Sbjct 2944 CAGCTTCAGCAAAAATCTGACGAACGCGAGCCGAATCGGGTTTGTGGACTAAGTAGCGCG 2885 Query 48120 CATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGG 48179 | | | || ||||| || | | ||| | |||||||| || |||||||| ||||| Sbjct 2884 TAAACAACAAACAGGCGAAATTACAGTGGAGACCTTCGTCGCGACTGATGAGTTCGTTGT 2825 Query 48180 AGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGC 48239 |||| | ||| || | ||| || | ||||||||| ||||| || ||||| || | Sbjct 2824 AGAACGTCAAACCGGGAGGCAACCCTCTTTTTTTGAGCCAAAAAATGGCTGCGAAGGATC 2765 Query 48240 CAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCG 48274 | |||||||| | || |||||| ||||| ||| Sbjct 2764 CGGAGAAGAAAACACCTTCCACTATGGCGAAAGCG 2730 >seq28800 Length=31993 Score = 84.2 bits (92), Expect = 4e-11 Identities = 187/279 (67%), Gaps = 4/279 (1%) Strand=Plus/Minus Query 48000 TGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCA 48059 ||||||||| || || | |||| |||||| | | | ||||| | || | ||| | Sbjct 5284 TGTTCATGCTGATCAGAGCGACGGACAAAGCTTCTAGTAAAAACTGTTGTTCGAGCTGAA 5225 Query 48060 CGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGT---GCT 48116 ||||||| | | |||||| ||||||| | ||| |||| | ||||| || Sbjct 5224 CGGCTTCGGCAAAAATCTGAAGGACGCGGGCCGGATCGGGCTTGTGGGCCAGGTAGCGCG 5165 Query 48117 TGG-CATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACG 48175 || || |||| ||| || || | | | || ||| || || | |||||||| || Sbjct 5164 TGAACAGCAAGCAAGCAAGCCAATTTGCAGCACAGGCCATCTTCGAGACTGATGAGTTCG 5105 Query 48176 TTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAA 48235 ||| | | | |||||||| | |||||| | |||||||||||||| || || || Sbjct 5104 TTGCTGTATGTCAAACCAGGCAGCATCCCCCTTTTCTTGAGCCAGAAAATGGCAGCAAAC 5045 Query 48236 GAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCG 48274 || || ||| |||| | ||| |||||| ||||| ||| Sbjct 5044 GATCCCGAGTAGAAAACGCCTTCCACTATAGCGAAAGCG 5006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 929859941753600