Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq20928 118 3e-21 seq32378 104 7e-17 seq1376 100 8e-16 seq52744 86.0 2e-11 >seq20928 Length=42431 Score = 118 bits (130), Expect = 3e-21 Identities = 231/336 (69%), Gaps = 14/336 (4%) Strand=Plus/Plus Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATT----TTGTCTCGCAA 289084 |||||||| |||||| || || || || ||||| || |||| | ||| | || | Sbjct 36731 ACCAACAGAATCAATCTCATCGATAAATATCACGCATGGAGCCCTGGACTTGGCACG--A 36788 Query 289085 TTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAG 289144 || ||| | ||||||||||| || || |||| || ||||| |||| || | Sbjct 36789 CTGAAAAGA--TCTCTTACACGTCTAGCACCCTGACCCACTAGAATTTCATCAAACTCTG 36846 Query 289145 AAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204 | | | | |||| ||||| ||||| |||||| || || || || || || | | | Sbjct 36847 GACCTGCAGCATGAAAGAATGGTACATCTGCTTCACCAGCAACAGCTCTGGCTAACAAAG 36906 Query 289205 TCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTA-CTTTTGCCCCA--G 289261 | ||||| ||||||||||| || |||||| ||| || ||||| | |||| |||| | Sbjct 36907 TTTTACCAGTTCCAGGTGGACCAACTAATAAAACACCTTTTGGAAGCTTTCCACCCAATG 36966 Query 289262 CAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTG 289321 | || | |||| |||| | |||||||||| |||||||| | | ||| | ||| | Sbjct 36967 CTGA---AAATTTTCCAGGATTTCTTAAAAATTCAACAATTTCTTGTAATTCTTGTTTAG 37023 Query 289322 CCTCATCACATCCTGCTACATCAGCAAAAGTAATAT 289357 | ||||| |||| ||||||| | || |||| || Sbjct 37024 CTTCATCTACTCCTTTTACATCATCGAATGTAACAT 37059 >seq32378 Length=26917 Score = 104 bits (114), Expect = 7e-17 Identities = 209/310 (67%), Gaps = 0/310 (0%) Strand=Plus/Plus Query 302534 TGTTATTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAAC 302593 || |||||||||| || |||||| || ||||| ||||||| ||||| | || Sbjct 5870 TGCTATTTCTTACTGTGCCATCATATGTAACCATAACACTTTCCATAGCTTTGATGAGAC 5929 Query 302594 GACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGAC 302653 | |||||||||||||||||| | ||||| ||||| |||||||| || || | | | Sbjct 5930 GTCGCTGAATATAACCAGTTTCTGCAGTTTTCACAGCAGTATCAATAAGTCCTTCTCTTC 5989 Query 302654 CACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAA 302713 |||||||||||||||| || | ||| ||| || || ||| | ||| | |||| Sbjct 5990 CACCCATAGCATGGAAAAAGAATTCTGATGGTGTTAAGCCAGCAAGGTACGAGTTTTCAA 6049 Query 302714 CGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCT 302773 | || || | || || || || || |||| || || | ||||| || Sbjct 6050 CAAAGCCTCTACTTTCAGGACCATAATCATCTTTAATAAAATGAGGTAAAGTCCTTTTGC 6109 Query 302774 CATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCT 302833 | | || |||| || || || || ||||||||||| || |||| || | ||| | | Sbjct 6110 GAAAACCAAATGGTATTCGTTTACCTTCAACGTTCTGTTGCCCCACACAGGCAATAACTT 6169 Query 302834 GCGAAATATT 302843 | || ||||| Sbjct 6170 GTGATATATT 6179 >seq1376 Length=202985 Score = 100 bits (110), Expect = 8e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 ||||| ||||| ||||| |||||||| | | ||| |||| ||| | || || || | | Sbjct 47993 CCAACTGCATCGATTTCATCAATGAACAAAATACAAGGAGCATTCTTTCGTGCCATGGAA 48052 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 || | |||| ||| | |||| ||||| ||||||| |||| || | |||||| || || Sbjct 48053 AACATGTCTCGTACTCTTGATGGTCCAACACCAACAAACATCTCGAGAAATTCCGACCCG 48112 Query 289150 GATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTA 289209 || || || || | || || || || || ||| || |||| | ||| || || Sbjct 48113 GAAACAGTGATAAAAGGAACGTTAGCCTCTCCAGCTGTGGCTTTCGCTAAAAGAGTTTTC 48172 Query 289210 CCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTT 289244 || ||||||||||| || ||||| ||||||| Sbjct 48173 CCAGTTCCAGGTGGGCCTGTTAATATTGCTCCCTT 48207 >seq52744 Length=12040 Score = 86.0 bits (94), Expect = 2e-11 Identities = 193/285 (68%), Gaps = 5/285 (2%) Strand=Plus/Plus Query 133076 TTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAA-CAGCAAGA 133134 || ||| |||| || ||| | || |||| |||||| | || |||||| ||| | Sbjct 2290 TTCGTTTTGTTTCCCATTCAATACCACGATATTTGGGACGCTTACAAAAAAGCAGTTGCA 2349 Query 133135 TTTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGAAGCC-- 133192 | | |||||||| | ||||| ||||| || || || | | ||||||||| Sbjct 2350 TCT-TTTTGGACCGTAGAAGAAGTTGATTTGTCGAAGGATTTACGCAACTGGGAAGAAAG 2408 Query 133193 CTT-ACTGGGGATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGTGA 133251 ||| ||| | || || |||||||| | |||||||| || || ||||| || || Sbjct 2409 CTTGACTTCTCAAGAGAAGCATTTTATCGCACATATTTTAGCTTTCTTCGCTGCTAGCGA 2468 Query 133252 TGGTATTGTTCTTGAAAATTTAGGAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGC 133311 ||||| || ||| |||||| || ||||||| |||||||||||| | ||| | Sbjct 2469 CGGTATCGTCAATGAGAATTTACTGACGCGGTTTAGTCAAGAAGTTCAACTACCTGAAAC 2528 Query 133312 CCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTC 133356 || |||||| || | || || || ||||| ||||| ||||| Sbjct 2529 ACGATGCTTTTACGGATTTCAAATAGCTATGGAGAATATTCATTC 2573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1469108413845105