Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq15471 100 2e-16 seq56889 86.0 5e-12 seq9166 86.0 5e-12 >seq15471 Length=58760 Score = 100 bits (110), Expect = 2e-16 Identities = 123/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 34319 CAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCA 34378 |||| || || || |||||| ||| || | ||||| ||||| ||||| |||||||||| Sbjct 3219 CAGTTTCAGGATTATCACATGACGGGCAAAGAACAAATTTGCGAATGAAGCCATCAAGCA 3278 Query 34379 GGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAAT 34438 ||||| | ||| | | ||||| ||||| || || ||| | ||||||||||| ||| Sbjct 3279 AATCCTGAAGTTTAGCTGCTTCGTGAGAGCCATTAACAATGTAGCGTTCGTTTTTCAAAT 3338 Query 34439 CGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486 | | ||| || || || || || || || || || || || || |||| Sbjct 3339 CAAACTGAGTCTGTGCACCGAGTTCACATCCAAAATATTTAGTAGGGT 3386 >seq56889 Length=12386 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| || || || || ||||| || || | ||| || || Sbjct 6514 ATGCAGATTTTCGTCAAGACATTGACTGGGAAAACAATCACTCTTGAAGTTGAACCAAGT 6455 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| ||| | || || ||||| ||||| |||||| | || || || Sbjct 6454 GACACTATCGAAAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATTCCACCCGACCAG 6395 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||||| ||| ||||| ||| | || |||| | || | | || || ||| Sbjct 6394 CAACGTCTTATTTTTGCTGGTAAGCAGTTAGAAGATGGTCGTACTCTTTCAGACTATAAC 6335 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||||||||||||||| |||||| | ||||| || || |||| || Sbjct 6334 ATTCAAAAAGAATCTACCTTGCACCTTGTGTTGAGGCTTAGAGGAGG 6288 >seq9166 Length=72308 Score = 86.0 bits (94), Expect = 5e-12 Identities = 166/242 (69%), Gaps = 5/242 (2%) Strand=Plus/Minus Query 110259 ATAAGAGATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCG 110318 |||||| ||| || |||| ||||||| |||||||||| || ||||| ||||| ||| Sbjct 29510 ATAAGATATTGAA---GCAATTATTTGTGAAAACTTTAAGTGGGAAAACAATTACTATCG 29454 Query 110319 AAACGGAGCCTGAC-GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGC 110377 | ||||| ||| || || | | || ||| | | ||| || |||||||| Sbjct 29453 ATGTTGAGCC-GACAGACACCATTGAAATTGTTAAAAAACAAATTCAAGATAAAGAAGGA 29395 Query 110378 GTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACA 110437 | || || ||||| ||||||||| ||| || |||||| |||| ||| | | | Sbjct 29394 ATTCCACCTGAACAACAGCGACTTATTTTTGCCGGCAAACAGTTGGAAGATAATCGGATA 29335 Query 110438 ATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGG 110497 || ||||| || |||||||||||| || || ||| | || | |||||| |||| Sbjct 29334 TTGAATGATTATAATATTCAAAAAGAAAACACTTTACACCTTGTTCTGAGACTGAGAGGT 29275 Query 110498 GG 110499 || Sbjct 29274 GG 29273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412118748546845