Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq15471 100 2e-16
seq56889 86.0 5e-12
seq9166 86.0 5e-12
>seq15471
Length=58760
Score = 100 bits (110), Expect = 2e-16
Identities = 123/168 (73%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 34319 CAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCA 34378
|||| || || || |||||| ||| || | ||||| ||||| ||||| ||||||||||
Sbjct 3219 CAGTTTCAGGATTATCACATGACGGGCAAAGAACAAATTTGCGAATGAAGCCATCAAGCA 3278
Query 34379 GGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAAT 34438
||||| | ||| | | ||||| ||||| || || ||| | ||||||||||| |||
Sbjct 3279 AATCCTGAAGTTTAGCTGCTTCGTGAGAGCCATTAACAATGTAGCGTTCGTTTTTCAAAT 3338
Query 34439 CGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486
| | ||| || || || || || || || || || || || || ||||
Sbjct 3339 CAAACTGAGTCTGTGCACCGAGTTCACATCCAAAATATTTAGTAGGGT 3386
>seq56889
Length=12386
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || ||||| || || || || ||||| || || | ||| || ||
Sbjct 6514 ATGCAGATTTTCGTCAAGACATTGACTGGGAAAACAATCACTCTTGAAGTTGAACCAAGT 6455
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| ||| ||| | || || ||||| ||||| |||||| | || || ||
Sbjct 6454 GACACTATCGAAAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATTCCACCCGACCAG 6395
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||| | ||||||| ||| ||||| ||| | || |||| | || | | || || |||
Sbjct 6394 CAACGTCTTATTTTTGCTGGTAAGCAGTTAGAAGATGGTCGTACTCTTTCAGACTATAAC 6335
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||||||||||||||| |||||| | ||||| || || |||| ||
Sbjct 6334 ATTCAAAAAGAATCTACCTTGCACCTTGTGTTGAGGCTTAGAGGAGG 6288
>seq9166
Length=72308
Score = 86.0 bits (94), Expect = 5e-12
Identities = 166/242 (69%), Gaps = 5/242 (2%)
Strand=Plus/Minus
Query 110259 ATAAGAGATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCG 110318
|||||| ||| || |||| ||||||| |||||||||| || ||||| ||||| |||
Sbjct 29510 ATAAGATATTGAA---GCAATTATTTGTGAAAACTTTAAGTGGGAAAACAATTACTATCG 29454
Query 110319 AAACGGAGCCTGAC-GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGC 110377
| ||||| ||| || || | | || ||| | | ||| || ||||||||
Sbjct 29453 ATGTTGAGCC-GACAGACACCATTGAAATTGTTAAAAAACAAATTCAAGATAAAGAAGGA 29395
Query 110378 GTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACA 110437
| || || ||||| ||||||||| ||| || |||||| |||| ||| | | |
Sbjct 29394 ATTCCACCTGAACAACAGCGACTTATTTTTGCCGGCAAACAGTTGGAAGATAATCGGATA 29335
Query 110438 ATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGG 110497
|| ||||| || |||||||||||| || || ||| | || | |||||| ||||
Sbjct 29334 TTGAATGATTATAATATTCAAAAAGAAAACACTTTACACCTTGTTCTGAGACTGAGAGGT 29275
Query 110498 GG 110499
||
Sbjct 29274 GG 29273
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412118748546845
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |