Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq22692 105 1e-16 seq23158 87.8 3e-11 >seq22692 Length=38660 Score = 105 bits (116), Expect = 1e-16 Identities = 169/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| || || ||||| |||||||| ||||||||||||||| | |||| ||| || ||| Sbjct 24089 TGTATTTCGTCACGGCTTTGGTACCTTCTGAGACGGCGTGCTTCGCCAATTCACCAGGCA 24030 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || || || ||||| || || || || || || ||| | ||||| | Sbjct 24029 ACAGCAATCGGACTGCGGTTTGTATTTCTCGACTGGTTATGGTGGATCTTTTGTTGTAGT 23970 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| || | ||||| | || | |||| |||||||| ||||| ||||| Sbjct 23969 GGGCCAAACGAGACGACTCGGCAGCAATCCTCTCGAAAATGTCGTTCACAAAGCTGTTCA 23910 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 | || ||||| | |||| ||||||| || ||| || |||||||| || | || |||| Sbjct 23909 TTATGGACATAGCTTTGCTGGAGATACCGGTGTCAGGATGCACCTGTTTTAAAACTTTGT 23850 Query 1485710 AAA 1485712 ||| Sbjct 23849 AAA 23847 >seq23158 Length=28319 Score = 87.8 bits (96), Expect = 3e-11 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 793907 ATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 793966 |||||| | |||||| ||| || || ||||| |||| ||||| |||| |||||| Sbjct 5329 ATACTCACTCACGCGTTTCTCAAAGAAATTGGTTTTGCTTTCGAGACTAATCAGCTCCAT 5270 Query 793967 CCACGGGAACGGGTTGGCCG--TCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGG 794024 || ||| |||||| ||| | | || | ||| | ||| |||| | |||| Sbjct 5269 AAACTCGAAAGGGTTGCCCGAGTGAAATATT--TTCAGGTACCTGAGCTGCAACAGCAAA 5212 Query 794025 CGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCC 794084 |||||||||| |||||||||||||| ||| || ||| ||||||||| || || | Sbjct 5211 TGGTCGGCGACAAATTCAATGTACTGCTTCATCAGCGCGCTGTTCATGCCAATCAGGGAG 5152 Query 794085 ACGGGCAGCGACTCGCTGACAAACTCTTTCTCGA 794118 |||||||| | || || ||| |||| |||| Sbjct 5151 ACGGGCAGAGCTTCCAGGAGAAATTCTTGTTCGA 5118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7900964098693935