Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq56889 134 9e-27 seq1004 84.2 1e-11 >seq56889 Length=12386 Score = 134 bits (148), Expect = 9e-27 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||| | | || |||||| || | ||| || ||||| ||||| || || || Sbjct 6516 CCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAA 6575 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| || || || ||||| || | || ||||||||| | || Sbjct 6576 AGAGTGCGGCCATCTTCCAGCTGTTTGCCAGCGAAAATTAAACGCTGCTGGTCTGGTGGG 6635 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || || ||||| | |||||| || ||| | | || | ||| ||| ||| || Sbjct 6636 ATACCTTCTTTGTCTTGGATTTTTGCCTTCACGTTTTCAATGGTGTCACTGGGCTCTACT 6695 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || |||||||| ||||||||||||||||||||||||||||| Sbjct 6696 TCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTTACAAAGATCTGCAT 6742 Score = 132 bits (146), Expect = 3e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| ||||||| ||| || || || | ||| ||| ||||| || || ||||| || Sbjct 5604 CCTCCTCTCAACCGCAGCACAAGATGCAATGTGGACTCTTTCTGGATATTGTAGTCGGAC 5663 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| | || |||| || |||||||| || || || || || |||||||||||| | || Sbjct 5664 AGGGTTCGGCCATCTTCAAGTTGCTTACCAGCAAAAATAAGACGTTGCTGGTCTGGGGGA 5723 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||| ||||| | |||||| ||||| | | || | ||| ||| || || Sbjct 5724 ATGCCCTCTTTGTCCTGAATTTTTGCCTTGACATTTTCAATTGTATCACTGGGTTCCACT 5783 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| ||||||||||| || || | ||||| ||||| ||||||||| Sbjct 5784 TCAAGTGTTATGGTCTTCCCTGTTAAAGTCTTGACAAAAATCTGCATG 5831 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||| | | || |||||| || | ||| || ||||| ||||| || || || Sbjct 6060 CCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAA 6119 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| || || || || || || | || ||||||||| | || Sbjct 6120 AGCGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGG 6179 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || || ||||| | |||||| || ||| | | || | ||| ||| || || Sbjct 6180 ATACCTTCTTTGTCTTGGATTTTTGCCTTTACGTTTTCAATGGTGTCACTGGGTTCCACT 6239 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| || |||||||| |||||||||||||| ||||||||||||||| Sbjct 6240 TCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATG 6287 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || || | ||||| || || || | ||| || || ||||||||||||||||| Sbjct 5832 CCGCCTCTAAGCCTCAACACAAGATGCAGGGTAGATTCTTTTTGAATGTTATAGTCCGAA 5891 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| | || |||| || | |||||||| || || ||||| || ||||||||| | || Sbjct 5892 AGGGTACGACCATCTTCTAACTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGG 5951 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || || ||||| | || ||| ||||| | | || | ||| | | || || Sbjct 5952 ATACCTTCTTTGTCTTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTTGGTTCAACT 6011 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| || || || || || || | ||||| ||||| ||||||||| Sbjct 6012 TCAAGAGTGATTGTTTTCCCAGTCAATGTCTTAACAAAAATCTGCATG 6059 Score = 95.1 bits (104), Expect = 8e-15 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||||| ||| ||| ||||| || || ||||| || | | | || |||| Sbjct 6759 AGAACCAGGTGAAGGGTTGACTCTTTCTGGATATTGTAGTCTGACAAGGTACGACCATCT 6818 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| || || || |||| | |||||||| | || | ||||| || || Sbjct 6819 TCTAGTTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCAGGAGGAATACCCTCTTTATCT 6878 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| || || | | || | ||| ||| || || |||| |||||||||| Sbjct 6879 TGGATTTTAGCCTTCACATTTTCAATGGTATCACTGGGTTCAACCTCAAGGGTTATGGTC 6938 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATC 34972 || || || || || || ||||||||| Sbjct 6939 TTGCCAGTAAGTGTTTTCACAAAGATC 6965 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| || | ||||| || ||||| | ||| || || |||||||||||||| || Sbjct 6288 CCTCCTCTAAGCCTCAACACAAGGTGCAAGGTAGATTCTTTTTGAATGTTATAGTCTGAA 6347 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || |||| || | ||||| || || || || || ||||||||||| | || Sbjct 6348 AGAGTACGACCATCTTCTAACTGCTTACCAGCAAAAATAAGACGTTGCTGGTCGGGTGGA 6407 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || ||| ||||| | | || | ||| | | || || Sbjct 6408 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTTGGTTCAACT 6467 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| || || || || || || | ||||| || || ||||||||| Sbjct 6468 TCAAGAGTGATTGTTTTCCCAGTCAATGTCTTGACGAAAATCTGCATG 6515 Score = 86.0 bits (94), Expect = 4e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || || ||||||| |||| ||| | ||| || ||||| ||||| ||||| || Sbjct 2967 CCACCTCTTAACCTCAAAACCAAGTGCAATGTGGATTCTTTCTGTATGTTGTAGTCTGAC 3026 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || |||| || | ||||| || || || || || |||||||||||| | || Sbjct 3027 AGTGTTCGGCCATCTTCTAACTGCTTGCCTGCAAAAATAAGACGTTGCTGGTCTGGAGGA 3086 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || || ||||| | ||||||| ||| ||| | || | ||| ||| || || Sbjct 3087 ATACCTTCTTTGTCTTGTATTTTTGCTTTCACGTTCTCGATAGTGTCACTGGGTTCAACC 3146 Query 34931 TCAACGGTTATGGTCTTTCC 34950 || | ||||||||| || || Sbjct 3147 TCCAAGGTTATGGTTTTGCC 3166 Score = 86.0 bits (94), Expect = 4e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 34793 TGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGT 34852 || |||||||||||||| | | | |||| || | ||||| || || ||||| || Sbjct 5418 TGGATGTTATAGTCCGACAAAGTCCTGCCATCCTCTAACTGCTTACCAGCAAAGATAAGA 5477 Query 34853 CGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATC 34912 || || |||||| | || | || || ||||| | |||||| |||||| |||| Sbjct 5478 CGCTGTTGGTCTGGGGGAATGCCTTCTTTGTCCTGAATTTTTGCCTTGACGTTCTCTATT 5537 Query 34913 GATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATC 34972 | ||| | | ||| ||||| | ||| || ||||| || || | ||||| ||||| ||| Sbjct 5538 GTATCACTTGACTCAACATCCAAGGTAATTGTCTTCCCAGTCAATGTCTTCACAAAAATC 5597 Query 34973 TGCAT 34977 ||||| Sbjct 5598 TGCAT 5602 >seq1004 Length=176236 Score = 84.2 bits (92), Expect = 1e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 34747 ATTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTC 34806 |||||| || | | || |||||| || || | ||||||||| |||||||| || ||||| Sbjct 108948 ATTTCCGCCTCGAAGCCGCAGGACGAGATGGAGGGTGCTCTCTTTCTGAATATTGTAGTC 108889 Query 34807 CGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTG 34866 || ||| || || |||||||||||||| || || |||| || || || ||| | Sbjct 108888 GCTCAGCGAGCGATCGTCCTCCAGTTGCTTTCCCGCAAAAATCAACCGCTGTTGATCTGG 108829 Query 34867 CGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| | || || || || | ||||| | ||| || || Sbjct 108828 CGGTATACCTTCTTTATCTTGAATTTTCTCTTTTACAGA 108790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325122538878635