Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq56889 159 3e-34 seq31184 109 4e-19 seq95420 107 1e-18 seq4799 100 2e-16 seq23149 98.7 8e-16 seq9166 98.7 8e-16 seq39653 84.2 2e-11 >seq56889 Length=12386 Score = 159 bits (176), Expect = 3e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | ||| || || |||||||||||||||||||| |||| || ||| ||| ||| Sbjct 5846 CAACACAAGATGCAGGGTAGATTCTTTTTGAATGTTATAGTCCGAAAGGGTACGACCATC 5905 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || | || || |||||| | |||| | ||||| || || || ||||| |||||||| Sbjct 5906 TTCTAACTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGGATACCTTCTTTGTC 5965 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 ||| | ||| |||||| |||| | ||||||| |||| ||||||||||| || || Sbjct 5966 TTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTTGGTTCAACTTCAAGAGTGATTGT 6025 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| ||||| || || |||||||| |||||||| Sbjct 6026 TTTCCCAGTCAATGTCTTAACAAAAATCTGCAT 6058 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| ||||| |||||||| | ||| | ||||| ||||| || || || || || | Sbjct 5604 CCTCCTCTCAACCGCAGCACAAGATGCAATGTGGACTCTTTCTGGATATTGTAGTCGGAC 5663 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| || ||||| || |||||| | || | | |||||| || || ||| Sbjct 5664 AGGGTTCGGCCATCTTCAAGTTGCTTACCAGCAAAAATAAGACGTTGCTGGTCTGGGGGA 5723 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||||||||| || |||||||| |||||| |||| | || ||| |||| || Sbjct 5724 ATGCCCTCTTTGTCCTG-AATTTTTGCCTTGACATTTTCAATTGTATCACTGGGTTCCAC 5782 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||| ||||| || || || ||||| || || ||||| |||||||| Sbjct 5783 TTCAAGTGTTATGGTCTTCCCTGTTAAAGTCTTGACAAAAATCTGCAT 5830 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||| | |||| |||| ||| || || |||||||| || ||||| ||||| | | Sbjct 6060 CCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAA 6119 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || |||||||||||| | || || | ||||| || || || Sbjct 6120 AGCGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGG 6179 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| ||||||||||| | |||| || || |||| | |||||| |||| ||| Sbjct 6180 ATACCTTCTTTGTCTTGGATTTTTGCCTTTACGTTTTCAATGGTGTCACTGGGTTCCACT 6239 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || ||||| || | ||| || ||||| |||||||| Sbjct 6240 TCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 6286 Score = 140 bits (154), Expect = 2e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||| | |||| |||| ||| || || |||||||| || ||||| ||||| | | Sbjct 6516 CCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAA 6575 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || ||||||||||| | || || | ||||| || || || Sbjct 6576 AGAGTGCGGCCATCTTCCAGCTGTTTGCCAGCGAAAATTAAACGCTGCTGGTCTGGTGGG 6635 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| ||||||||||| | |||| || || |||| | |||||| | |||||| Sbjct 6636 ATACCTTCTTTGTCTTGGATTTTTGCCTTCACGTTTTCAATGGTGTCACTGGGCTCTACT 6695 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || ||||| || | ||| || ||||| |||||||| Sbjct 6696 TCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTTACAAAGATCTGCAT 6742 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 || |||||||||||||||||||| || | || || ||| ||| || | || || ||| Sbjct 6318 GTAGATTCTTTTTGAATGTTATAGTCTGAAAGAGTACGACCATCTTCTAACTGCTTACCA 6377 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTG 29709 ||| | || | | |||||| || || ||||| || || |||||||| | ||| ||| Sbjct 6378 GCAAAAATAAGACGTTGCTGGTCGGGTGGAATGCCTTCCTTGTCTTGGATCTTTGCCTTG 6437 Query 29710 ACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTT 29769 ||| |||| | ||||||| |||| ||||||||||| || ||||| ||||| || || Sbjct 6438 ACATTTTCGATAGTGTCACTTGGTTCAACTTCAAGAGTGATTGTTTTCCCAGTCAATGTC 6497 Query 29770 TTAACAAATATCTGCAT 29786 || || || |||||||| Sbjct 6498 TTGACGAAAATCTGCAT 6514 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || |||| ||||| || || ||||| || || || || || | | ||| ||| | Sbjct 6756 CGTAGAACCAGGTGAAGGGTTGACTCTTTCTGGATATTGTAGTCTGACAAGGTACGACCA 6815 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || ||||| ||||||||| | ||||| || ||||| || || |||||||||||||| Sbjct 6816 TCTTCTAGTTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCAGGAGGAATACCCTCTTTA 6875 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | ||| || ||| |||| | || ||| |||| || ||||| ||||| Sbjct 6876 TCTTGGATTTTAGCCTTCACATTTTCAATGGTATCACTGGGTTCAACCTCAAGGGTTATG 6935 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATC 29781 || |||||||| | ||||| ||||| ||| Sbjct 6936 GTCTTGCCAGTAAGTGTTTTCACAAAGATC 6965 Score = 95.1 bits (104), Expect = 9e-15 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || || | || ||||| || | ||||||||||| || ||||| || || | Sbjct 2967 CCACCTCTTAACCTCAAAACCAAGTGCAATGTGGATTCTTTCTGTATGTTGTAGTCTGAC 3026 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || | || ||||| ||| | || | | |||||| || || ||| Sbjct 3027 AGTGTTCGGCCATCTTCTAACTGCTTGCCTGCAAAAATAAGACGTTGCTGGTCTGGAGGA 3086 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| ||||||||||||| |||| ||| || | || | ||||||| |||| || Sbjct 3087 ATACCTTCTTTGTCTTGTATTTTTGCTTTCACGTTCTCGATAGTGTCACTGGGTTCAACC 3146 Query 29740 TCAAGAGTTATAGTTTTGCC 29759 || | ||||| |||||||| Sbjct 3147 TCCAAGGTTATGGTTTTGCC 3166 >seq31184 Length=35399 Score = 109 bits (120), Expect = 4e-19 Identities = 143/194 (74%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 29595 TTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCAT 29653 |||||||||||| |||||||| |||| | ||| ||| || | |||||||| ||| Sbjct 3324 TTCTTTTTGAATATTATAATCATTCAAT-ATCCGATTATCTTCCAACTGTTTGCCGGCAA 3266 Query 29654 ATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAG 29713 | || | || || | | | ||||| || ||||| ||||| ||||| | ||| |||| Sbjct 3265 AAATAAGTCGCTGTTATACATGTGGAATTCCTTCTTTATCTTG-AATTTGTTTTTAACAG 3207 Query 29714 TTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAA 29773 |||| | ||||| | || || || || | ||| || ||||| |||||||| ||||| | Sbjct 3206 TTTCAATGGTGTCTGTCAGCTCAACATCGATAGTAATTGTTTTCCCAGTTAAAGTTTTTA 3147 Query 29774 CAAATATCTGCATT 29787 |||||| ||||||| Sbjct 3146 CAAATAACTGCATT 3133 >seq95420 Length=6446 Score = 107 bits (118), Expect = 1e-18 Identities = 146/198 (74%), Gaps = 7/198 (4%) Strand=Plus/Plus Query 29595 TTCTTTTTGAATGTTATAATC-CGCAATGG-TGCGAGAATCATCGAGT---TGTTTGCCA 29649 |||||||||||| |||||||| | ||| | | ||||||| | ||||||||| Sbjct 68 TTCTTTTTGAATATTATAATCGCTTAATTAATATTATAATCATCCTCTAACTGTTTGCCA 127 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTG 29709 ||| | || | || ||||||||| || ||||| || ||||||||||| ||| | | |||| Sbjct 128 GCAAAAATAAGTCGTTGCTGATCGGGTGGAATTCCTTCTTTGTCTTG-AATATATTTTTG 186 Query 29710 -ACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768 ||| |||| | ||| || | ||| || || | ||| || ||||| ||||| || || Sbjct 187 CACACTTTCAATAGTATCTGTTGGTTGAACATCGATAGTGATTGTTTTTCCAGTCAAAGT 246 Query 29769 TTTAACAAATATCTGCAT 29786 ||| ||||||| ||||| Sbjct 247 TTTCACAAATAATTGCAT 264 >seq4799 Length=133078 Score = 100 bits (110), Expect = 2e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || |||||||| || || |||||||| ||||| | ||| | || ||| | Sbjct 112052 CGGAGAACCAAATGTAGAGTTGATTCTTTCCGAATGCTGGAATATCAGAGTGTACGACCA 112111 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || | ||||||||| | || | | |||||||||||| ||||| || || || Sbjct 112112 TCTTCAAGCTACTTGCCAGCAGAAATGAGACGTTGCTGATCCGGAGGAATGCCTTCGTTA 112171 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 |||| || ||| ||| ||| |||| | |||| ||||| | | ||||| || Sbjct 112172 TCTT-CGATCTTTATTTTACATTTTCATTTGCGTCACTGGGTTCTGCCACCAGAGTGATG 112230 Query 29752 GTTTTGCCAGTTA-AGGTTTTAACAAATATCTGCATT 29787 ||||||||||||| | ||||| || || ||||||||| Sbjct 112231 GTTTTGCCAGTTAGAAGTTTTGACGAAGATCTGCATT 112267 >seq23149 Length=43904 Score = 98.7 bits (108), Expect = 8e-16 Identities = 139/193 (72%), Gaps = 8/193 (4%) Strand=Plus/Plus Query 29595 TTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCAT 29653 |||||||||||| |||||||| | ||| | | | ||| || | |||||||||||| Sbjct 19878 TTCTTTTTGAATATTATAATCGCTTAATA-TCCTATCATCCTCCAACTGTTTGCCAGCAA 19936 Query 29654 ATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAG 29713 | || | | ||||||||| || ||||| || ||||||||||| | || || ||| ||| Sbjct 19937 AAATAAGCCGTTGCTGATCGGGTGGAATTCCTTCTTTGTCTTGAATTTGTTTTTTAACAC 19996 Query 29714 TTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAA 29773 |||| | ||| ||| || || | ||| || ||||| ||| | || ||||| | Sbjct 19997 TTTCAATAGT------TGGTTGAACATCGATAGTGATTGTTTTTCCATTCAAAGTTTTCA 20050 Query 29774 CAAATATCTGCAT 29786 |||||| ||||| Sbjct 20051 CAAATAATTGCAT 20063 >seq9166 Length=72308 Score = 98.7 bits (108), Expect = 8e-16 Identities = 135/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 29595 TTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCAT 29653 |||||||||||| |||||||| |||| | ||| ||| || | |||||||| ||| Sbjct 29308 TTCTTTTTGAATATTATAATCATTCAAT-ATCCGATTATCTTCCAACTGTTTGCCGGCAA 29366 Query 29654 ATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAG 29713 | || | || || || || || ||||| || ||||| ||||| | || || ||| ||| Sbjct 29367 AAATAAGTCGCTGTTGTTCAGGTGGAATTCCTTCTTTATCTTGAATTTGTTTTTTAACAA 29426 Query 29714 TTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAA 29773 |||| | ||||| | | || || || | ||| || ||||| ||| |||| ||||| | Sbjct 29427 TTTCAATGGTGTCTGTCGGCTCAACATCGATAGTAATTGTTTTCCCACTTAAAGTTTTCA 29486 Query 29774 CAAATA 29779 |||||| Sbjct 29487 CAAATA 29492 >seq39653 Length=35343 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||| |||||| |||||| | ||| | |||| | ||| || || | || || | Sbjct 16183 CCTCGCCTCAACTGCAGCATAATATGCAATATGGACTTTTTCTGGATACTGTAGTCTGAC 16242 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| |||| |||||| |||||| | || | | |||||| || || ||| Sbjct 16243 AGGGTTCGGCCATCTTCGATTTGTTTACCAGCAAAAATAAGACGTTGCTGGTCTGGTGGA 16302 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||||||||||| | |||| ||||| | || | |||||| ||||| ||| Sbjct 16303 ATGCCCTCTTTGTCTTAGATTTTTGCTTTGATGTTCTCAATTGTGTCACTGAGTTCCACT 16362 Query 29740 TCAAGAGTTAT 29750 || || || || Sbjct 16363 TCTAGTGTGAT 16373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384544713081765