Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq6389 111 3e-19 >seq6389 Length=102872 Score = 111 bits (122), Expect = 3e-19 Identities = 246/367 (67%), Gaps = 4/367 (1%) Strand=Plus/Minus Query 142954 TTCCTATTTATACAGATAAAGATGAGTGGACTACTTGGaaaaaaaTACCCGATCCCGTCT 143013 || || | || || ||| | ||||| ||| | | ||| |||| || | ||||| || Sbjct 17504 TTTCTGTCTACACTGATGATGATGAATGGTTTTCATGGCAAAAGATGTCTGATCCAGTAC 17445 Query 143014 TGCATATAGAACTTAGGAGATGGGCGGATGTTTTTCTTATAGCGCCCTTAACGGCAAATA 143073 | ||||| ||||| || | ||||| |||||||| | || || || | | |||||| Sbjct 17444 TTCATATTGAACTGAGAAAGTGGGCTGATGTTTTGGTGATTGCACCTATGAGTGCAAATT 17385 Query 143074 CGTTAGCAAAAATAGCCAACGGTATATGCGATAATTTACTAACATCTATAGTAAGAGCCT 143133 | | || ||| |||| || || || |||||||| ||||||| ||| || | || | Sbjct 17384 CAATGGCGAAAGTAGCAAATGGACAGTGTGATAATTTGCTAACATGTATTGTTCGTGCTT 17325 Query 143134 GGGATATAAATAAACCTCTTATTTTTTGTCCCGCTATGAATAGCCTTATGTGGGAACATC 143193 ||||| ||||| ||| | | |||||| || ||||| | | |||||||||||||| Sbjct 17324 GGGATCGTGCGAAACCACTTTTGTATTGTCCAGCCATGAACACGCATATGTGGGAACATC 17265 Query 143194 CTATTACAGAAAAACATATAGATGCTTTAAAACATATGGGTTTCATAGAAATAGAATGCA 143253 || ||| || |||| | | | || | ||||||| | ||||| || ||| Sbjct 17264 CTGCTACTTCAATGCATACAACTCTTCTAGCAGATATGGGCTATCTAGAAGTACCATGTG 17205 Query 143254 TAGaaaaaaaaCTAGCCTGCGGAGACATAGGAAATGGTGCTATGGCAGAAGTTACAGAAA 143313 | |||||| | || || || || | || |||||| ||||| | ||| |||| Sbjct 17204 TCTCAAAAAAGTTGGCATGTGGTGAAACCGGTTATGGTGGAATGGCTGCGGTT---GAAA 17148 Query 143314 TCTATAG 143320 |||||| Sbjct 17147 -CTATAG 17142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 901788842874400