Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq5783 95.1 2e-14 seq3779 95.1 2e-14 seq4561 89.7 7e-13 seq23710 86.0 8e-12 >seq5783 Length=136462 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/74 (89%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 ||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 13125 GTCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 13184 Query 11788 CCCCGACGAGGAGG 11801 ||||| || ||||| Sbjct 13185 CCCCGCCGGGGAGG 13198 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 13126 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 13185 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 13186 CCCGCCGGGGAG 13197 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 13197 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 13138 Query 139413 TACTAACGAGGA 139424 ||||| |||||| Sbjct 13137 TACTACCGAGGA 13126 >seq3779 Length=122314 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 93906 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 93847 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 93846 CCCGCCGGGGAG 93835 Score = 93.3 bits (102), Expect = 6e-14 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 93906 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 93847 Query 11789 CCCGACGAGGAGG 11801 |||| || ||||| Sbjct 93846 CCCGCCGGGGAGG 93834 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 93835 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 93894 Query 139413 TACTAACGAGGAT 139425 ||||| ||||||| Sbjct 93895 TACTACCGAGGAT 93907 >seq4561 Length=102561 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 87412 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGTGGGAGACCGGGGTTCGATTC 87471 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 87472 CCCGCCGGGGAG 87483 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 87412 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGTGGGAGACCGGGGTTCGATTC 87471 Query 11789 CCCGACGAGGAGG 11801 |||| || ||||| Sbjct 87472 CCCGCCGGGGAGG 87484 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| ||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 87483 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCACGTGACAGGCGGGGATACTGACCACTA 87424 Query 139413 TACTAACGAGGAT 139425 ||||| ||||||| Sbjct 87423 TACTACCGAGGAT 87411 >seq23710 Length=47617 Score = 86.0 bits (94), Expect = 8e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 8666 AGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACGA 8725 ||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| || Sbjct 3099 AGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGCCGG 3158 Query 8726 GGAGC 8730 ||||| Sbjct 3159 GGAGC 3163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 651672413147600