Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq80983 109 1e-18 seq32378 86.0 1e-11 >seq80983 Length=5374 Score = 109 bits (120), Expect = 1e-18 Identities = 170/239 (71%), Gaps = 12/239 (5%) Strand=Plus/Minus Query 110757 TTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACT---TCGT 110813 |||||||| ||||| || || |||||| | ||||||||||||||||| ||||| || Sbjct 3343 TTTGCTATATATCTTGAGCCCTGGCATGCTGATATATTTGAATTCTTGGAACTGAAACGG 3284 Query 110814 AAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCA 110873 || ||| ||| |||||||| | || || ||||| || ||||| ||||||| | Sbjct 3283 AACAAT---GGAAAGGAAGAACAGCGTGCCCGGGATTTGTTCTATGCCTTGTGGATACCT 3227 Query 110874 GATTTATTCATGAAACGTGTTCAAGAAAATG-GCA--TGTGGTCTCTTATGTGTCCTCAT 110930 || ||||||||| | | || ||||||| || ||||| || ||||||||||| Sbjct 3226 GACTTATTCATGGTAAGAGT---GGAAAATGATCAATTGTGGAGCCTGATGTGTCCTCAC 3170 Query 110931 CGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATA 110989 | ||| || || | ||| | || |||||||||||| || | || ||||| || Sbjct 3169 GAGTGTCCAGGGTTAGCCGATTGCTGGGGTAAAGAGTTTGAAAACTTGTATGAAAAGTA 3111 >seq32378 Length=26917 Score = 86.0 bits (94), Expect = 1e-11 Identities = 167/247 (68%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 304895 CATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGCAGGCATCTCAAAGATCT 304954 ||| |||||||| | || || |||||| || | || | |||| || | |||| Sbjct 7580 CATGTTGCAACAATGATTGACAATGAACTTCCAGGCTTGCCTAGGGCAATGCAGAAATCT 7521 Query 304955 GGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGTATTCGAGGT 305014 || | || ||||| || | ||| | | ||| ||||||| || || || ||||| Sbjct 7520 GGGCGTCCATTAAAATCCATAAAGCAGAGACTGAAAAGTAAAGAAGGGCGAATACGAGGC 7461 Query 305015 AATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCACACCTGATTCTCAA 305074 ||| | ||||||||||| ||||||||| |||| | | ||| || ||||| ||| | | Sbjct 7460 AATTTGATGGGAAAACGAGTTGATTTTTCTGCACGTACTGTCATTACACCAGATCCAAAC 7401 Query 305075 ATTAGTCTTCATGAATTAGGAGTTCCAATTGAAATTGCTTTAAAACTAACATTTCCAGAG 305134 | || || ||||| | || ||||||| ||||| || |||||||||| || Sbjct 7400 CTAAGAATTGATGAAGTCGGTGTTCCAAGATCTATTGCACAGAATTTAACATTTCCTGAA 7341 Query 305135 AAAGTTA 305141 | |||| Sbjct 7340 ATTGTTA 7334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1184628224407065