Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq56889 98.7 2e-15 >seq56889 Length=12386 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || | || || ||||| |||||| | ||||| ||| |||| Sbjct 6055 CAGATTTTTGTTAAGACATTGACTGGGAAAACAATCACTCTTGAAGTTGAACCAAGTGAC 5996 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || ||||| || ||| |||||| ||||| |||||||| || || ||| || Sbjct 5995 ACTATCGAAAATGTCAAGGCAAAGATCCAAGACAAAGAAGGTATCCCACCAGACCAGCAG 5936 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || || || ||||||||||| |||||||| | || | | || || ||| | Sbjct 5935 CGTCTGATTTTTGCTGGAAAGCAGTTAGAAGATGGTCGTACCCTTTCGGACTATAACATT 5876 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 || ||||| ||||| || || ||||| ||||| ||| || Sbjct 5875 CAAAAAGAATCTACCCTGCATCTTGTGTTGAGGCTTAGA 5837 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || | ||||| || || || || | ||||||||| ||| Sbjct 5827 CAGATTTTTGTCAAGACTTTAACAGGGAAGACCATAACACTTGAAGTGGAACCCAGTGAT 5768 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | ||| || ||| ||| ||||| || ||||| || ||| || ||| ||| Sbjct 5767 ACAATTGAAAATGTCAAGGCAAAAATTCAGGACAAAGAGGGCATTCCCCCAGACCAGCAA 5708 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||| || || || ||||| | |||||||| | || || |||| ||||| || Sbjct 5707 CGTCTTATTTTTGCTGGTAAGCAACTTGAAGATGGCCGAACCCTGTCCGACTACAATATC 5648 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||||||||| || | || ||||| Sbjct 5647 CAGAAAGAGTCCACATTGCATCTTGT 5622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179645413220465