Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq56889 100 2e-16 seq8227 98.7 8e-16 seq95420 82.4 6e-11 >seq56889 Length=12386 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 106287 GGCAAGACCATTACCGTGGAAACAGAACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAA 106346 ||||| ||||| ||| |||| |||||| | || || | | | |||||| |||| Sbjct 3166 GGCAAAACCATAACCTTGGAGGTTGAACCCAGTGACACTATCGAGAACGTGAAAGCAAAA 3107 Query 106347 ATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAA 106406 || ||||||||||| | || || || ||| | ||||||| ||| ||||| || Sbjct 3106 ATACAAGACAAAGAAGGTATTCCTCCAGACCAGCAACGTCTTATTTTTGCAGGCAAGCAG 3047 Query 106407 TTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTA 106466 ||||||||| ||| || || ||||||||||| |||||||| ||| | || || Sbjct 3046 TTAGAAGATGGCCGAACACTGTCAGACTACAACATACAGAAAGAATCCACATTGCACTTG 2987 Query 106467 GTATTGAGGTTACGAGGAGG 106486 || ||||||||| |||| || Sbjct 2986 GTTTTGAGGTTAAGAGGTGG 2967 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| ||||||||||| ||||||||||| || || || || | ||| ||||| | Sbjct 6058 ATGCAGATTTTTGTTAAGACATTGACTGGGAAAACAATCACTCTTGAAGTTGAACCAAGT 5999 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || | | | || || ||| || ||||||||||| | || || || Sbjct 5998 GACACTATCGAAAATGTCAAGGCAAAGATCCAAGACAAAGAAGGTATCCCACCAGACCAG 5939 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTACA 106437 || | || |||| ||| || || || ||||||||| || | || | || | || | Sbjct 5938 CAGCGTCTGATTTTTGCTGGAAAGCAGTTAGAAGATGGTCGTACCCTTTCGG--ACTATA 5881 Query 106438 ACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 |||| |||||||||||||| || ||| | || |||||| | |||| || Sbjct 5880 ACATTCAAAAAGAATCTACCCTGCATCTTGTGTTGAGGCTTAGAGGCGG 5832 >seq8227 Length=99420 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||| ||||||| ||||||||||| ||||| || || || | || | || |||| Sbjct 16957 ATGCAATTTTTTGTGAAAACATTGACAGGCAAAACGATCACGATCGACGCTGAGCCCGCA 17016 Query 106320 GAT-TC-TGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATC 106377 || || | | || |||||| | |||||| ||||||||||| | || |||| Sbjct 17017 GACATCATAAAGTCC--GTGAAAGAGAAAATTCAAGACAAAGAAGGTATACCTCCAGATC 17074 Query 106378 AACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACA 106437 ||||| || | || | ||||| || ||| | || | | || || || |||||||| Sbjct 17075 AACAACGGTTAATCTTTGCGGAGAAGCAACTGGAGGGCGATCAATCTTTGAACGATTACA 17134 Query 106438 ACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 | || || ||||| |||||| ||||||||| |||| | ||||| ||| Sbjct 17135 ATATTCAGAAAGAGAGTACACTCCATTTAGTACTGAGAATTCGAGGCGGA 17184 >seq95420 Length=6446 Score = 82.4 bits (90), Expect = 6e-11 Identities = 151/220 (69%), Gaps = 5/220 (2%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||| | ||||| ||||| |||||||| || || || || | || |||| Sbjct 264 ATGCAATTATTTGTGAAAACTTTGACTGGAAAAACAATCACTATCGATGTTCAACCAACA 205 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| ||| || || | ||| ||||||||||| | || ||||| Sbjct 204 GATACTATTGAAAGTGTGCAAAAATATATTCAAGACAAAGAAGGAATTCCACCCGATCAG 145 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTA---GAAGATTCTAAAACTA--TGGGCGATT 106434 ||| | ||||||| ||| |||||||| ||| || |||| ||| | || | |||||| Sbjct 144 CAACGACTTATTTTTGCTGGCAAACAGTTAGAGGATGATTATAATATTAATTAAGCGATT 85 Query 106435 ACAACATACAAAAAGAATCTACACTACATTTAGTATTGAG 106474 | || || ||||||||| || ||||| | || ||||| Sbjct 84 ATAATATTCAAAAAGAAAACACTTTACATCTTGTTTTGAG 45 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401625154188320